FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7054, 574 aa
  1>>>pF1KB7054 574 - 574 aa - 574 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 15.3739+/-0.00124; mu= -27.9963+/- 0.073
 mean_var=711.4499+/-179.469, 0's: 0 Z-trim(115.6): 37  B-trim: 896 in 1/52
 Lambda= 0.048084
 statistics sampled from 16176 (16210) to 16176 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.796), E-opt: 0.2 (0.498), width:  16
 Scan time:  4.440

The best scores are:                                      opt bits E(32554)
CCDS8034.1 ZBTB3 gene_id:79842|Hs108|chr11         ( 574) 3933 288.2 1.9e-77


>>CCDS8034.1 ZBTB3 gene_id:79842|Hs108|chr11              (574 aa)
 initn: 3933 init1: 3933 opt: 3933  Z-score: 1503.8  bits: 288.2 E(32554): 1.9e-77
Smith-Waterman score: 3933; 100.0% identity (100.0% similar) in 574 aa overlap (1-574:1-574)

               10        20        30        40        50        60
pF1KB7 MLREFSKWGVEASPGKAWERKRSLLRGAVGRYRGATGGDLFWAPFPSWGTMEFPEHSQQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 MLREFSKWGVEASPGKAWERKRSLLRGAVGRYRGATGGDLFWAPFPSWGTMEFPEHSQQL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LQSLREQRSQGFLCDCTVMVGSTQFLAHRAVLASCSPFFQLFYKERELDKRDLVCIHNEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 LQSLREQRSQGFLCDCTVMVGSTQFLAHRAVLASCSPFFQLFYKERELDKRDLVCIHNEI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 VTAPAFGLLLDFMYAGQLTLRGDTPVEDVLAAASYLHMNDIVKVCKRRLQARALAEADST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 VTAPAFGLLLDFMYAGQLTLRGDTPVEDVLAAASYLHMNDIVKVCKRRLQARALAEADST
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 KKEEETNSQLPSLEFLSSTSRGTQPSLASAETSGHWGKGEWKGSAAPSPTVRPPDEPPMS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 KKEEETNSQLPSLEFLSSTSRGTQPSLASAETSGHWGKGEWKGSAAPSPTVRPPDEPPMS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 SGADTTQPGMEVDAPHLRAPHPPVADVSLASPSSSTETIPTNYFSSGISAVSLEPLPSLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 SGADTTQPGMEVDAPHLRAPHPPVADVSLASPSSSTETIPTNYFSSGISAVSLEPLPSLD
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 VGPESLRVVEPKDPGGPLQGFYPPASAPTSAPAPVSAPVPSQAPAPAEAELVQVKVEAIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 VGPESLRVVEPKDPGGPLQGFYPPASAPTSAPAPVSAPVPSQAPAPAEAELVQVKVEAIV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 ISDEETDVSDEQPQGPERAFPSGGAVYGAQPSQPEAFEDPGAAGLEEVGPSDHFLPTDPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 ISDEETDVSDEQPQGPERAFPSGGAVYGAQPSQPEAFEDPGAAGLEEVGPSDHFLPTDPH
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB7 LPYHLLPGAGQYHRGLVTSPLPAPASLHEPLYLSSEYEAAPGSFGVFTEDVPTCKTCGKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 LPYHLLPGAGQYHRGLVTSPLPAPASLHEPLYLSSEYEAAPGSFGVFTEDVPTCKTCGKT
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB7 FSCSYTLRRHATVHTRERPYECRYCLRSYTQSGDLYRHIRKAHNEDLAKRSKPDPEVGPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 FSCSYTLRRHATVHTRERPYECRYCLRSYTQSGDLYRHIRKAHNEDLAKRSKPDPEVGPL
              490       500       510       520       530       540

              550       560       570    
pF1KB7 LGVQPLPGSPTADRQSSSGGGPPKDFVLAPKTNI
       ::::::::::::::::::::::::::::::::::
CCDS80 LGVQPLPGSPTADRQSSSGGGPPKDFVLAPKTNI
              550       560       570    




574 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 14:35:58 2016 done: Mon Nov  7 14:35:59 2016
 Total Scan time:  4.440 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]