Result of FASTA (ccds) for
pFN21AB6530
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6530, 279 aa
1>>>pF1KB6530 279 - 279 aa - 279 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.5340+/-0.00154; mu= -3.7931+/- 0.089
mean_var=409.0376+/-109.787, 0's: 0 Z-trim(108.7): 99 B-trim: 971 in 2/48
Lambda= 0.063415
statistics sampled from 10270 (10360) to 10270 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.663), E-opt: 0.2 (0.318), width: 16
Scan time: 2.150
The best scores are: opt bits E(32554)
CCDS2070.1 FHL2 gene_id:2274|Hs108|chr2 ( 279) 2121 208.2 5.3e-54
CCDS5035.1 FHL5 gene_id:9457|Hs108|chr6 ( 284) 1381 140.5 1.3e-33
CCDS30678.1 FHL3 gene_id:2275|Hs108|chr1 ( 280) 1301 133.2 2e-31
CCDS14655.1 FHL1 gene_id:2273|Hs108|chrX ( 280) 1158 120.1 1.8e-27
CCDS55506.1 FHL1 gene_id:2273|Hs108|chrX ( 296) 1158 120.1 1.8e-27
CCDS55505.1 FHL1 gene_id:2273|Hs108|chrX ( 309) 1158 120.2 1.9e-27
CCDS55507.1 FHL1 gene_id:2273|Hs108|chrX ( 323) 979 103.8 1.6e-22
CCDS76036.1 FHL1 gene_id:2273|Hs108|chrX ( 194) 658 74.2 8.3e-14
CCDS83493.1 FHL1 gene_id:2273|Hs108|chrX ( 210) 658 74.2 8.8e-14
>>CCDS2070.1 FHL2 gene_id:2274|Hs108|chr2 (279 aa)
initn: 2121 init1: 2121 opt: 2121 Z-score: 1083.0 bits: 208.2 E(32554): 5.3e-54
Smith-Waterman score: 2121; 100.0% identity (100.0% similar) in 279 aa overlap (1-279:1-279)
10 20 30 40 50 60
pF1KB6 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 WHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 WHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 SWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 WHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFE
190 200 210 220 230 240
250 260 270
pF1KB6 ERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
:::::::::::::::::::::::::::::::::::::::
CCDS20 ERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
250 260 270
>>CCDS5035.1 FHL5 gene_id:9457|Hs108|chr6 (284 aa)
initn: 1911 init1: 1344 opt: 1381 Z-score: 717.0 bits: 140.5 E(32554): 1.3e-33
Smith-Waterman score: 1381; 59.4% identity (85.3% similar) in 278 aa overlap (2-279:3-280)
10 20 30 40 50
pF1KB6 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDR
: .: :..:. ::.::::.:...:::::.:.. .:.: :::: ::: : ::: ::::
CCDS50 MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 HWHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKG
::::.::.:..: .:::.::::::...::::.::::: :::: .::.:::::.::::.::
CCDS50 HWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 SSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQ
. ::::::.:. :.:::::: .: :.. :.::::.::. : : ::: ::.::.:. .:
CCDS50 NYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQ
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 PWHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISF
::::::.:..:::.: ..: .:::. .:..:. :::.::..:..::::: :.:.: :
CCDS50 LWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICF
190 200 210 220 230 240
240 250 260 270
pF1KB6 EERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
.. :::..:::: :::.::::.::::. .:.: ::. .
CCDS50 QDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGMDTDI
250 260 270 280
>>CCDS30678.1 FHL3 gene_id:2275|Hs108|chr1 (280 aa)
initn: 1679 init1: 1287 opt: 1301 Z-score: 677.5 bits: 133.2 E(32554): 2e-31
Smith-Waterman score: 1301; 53.8% identity (82.7% similar) in 277 aa overlap (1-277:1-277)
10 20 30 40 50 60
pF1KB6 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRH
:.: ::: .:::::.:.::: . .:::: :... ::::: :: . :: : ..: :.:::
CCDS30 MSESFDCAKCNESLYGRKYIQTDSGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 WHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGS
.::.::.: .:. ::.:.::. ....:::.::: . .::.:. : .:.:::.::.:: :.
CCDS30 FHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQP
.::: ::.: :.::.:..::.: . ..::::::.. : .:..:.: .: ::::::.::
CCDS30 TWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFE
::.::.:::.:. :.::.::.::. ::. :: .:.: ::..: :: :::: ::.:::
CCDS30 WHRECLVCTGCQTPLAGQQFTSRDEDPYCVACFGELFAPKCSSCKRPIVGLGGGKYVSFE
190 200 210 220 230 240
250 260 270
pF1KB6 ERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
.:.::..::.: .:: ::::.::. . :..:: :..
CCDS30 DRHWHHNCFSCARCSTSLVGQGFVPDGDQVLCQGCSQAGP
250 260 270 280
>>CCDS14655.1 FHL1 gene_id:2273|Hs108|chrX (280 aa)
initn: 1372 init1: 972 opt: 1158 Z-score: 606.8 bits: 120.1 E(32554): 1.8e-27
Smith-Waterman score: 1158; 48.2% identity (78.9% similar) in 280 aa overlap (1-279:1-280)
10 20 30 40 50 60
pF1KB6 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRH
:.:.::::.: . : ::::. .. :. ::. . :::: :: :::: : :.. ::.:
CCDS14 MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 WHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGS
::..::.:..: . :... :.::....::. : . : : ::. : :.:. : ...::::.
CCDS14 WHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQP
::. :: : :.: ::: ::.:: .. .:: :.: . : .::.:.: ::.::.::..::
CCDS14 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 WHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLG-GTKYISF
:: .::::..: :.:.:::::: .: ::..:. .. ::::::: :::.:.: :.. ...
CCDS14 WHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAY
190 200 210 220 230 240
240 250 260 270
pF1KB6 EERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
: ..::. ::.:::::..:... :. ..... ::::.: .
CCDS14 EGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKKL
250 260 270 280
>>CCDS55506.1 FHL1 gene_id:2273|Hs108|chrX (296 aa)
initn: 1372 init1: 972 opt: 1158 Z-score: 606.5 bits: 120.1 E(32554): 1.8e-27
Smith-Waterman score: 1158; 48.2% identity (78.9% similar) in 280 aa overlap (1-279:17-296)
10 20 30 40
pF1KB6 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECG
:.:.::::.: . : ::::. .. :. ::. . :::: ::
CCDS55 MASHRHSGPSSYKVGTMAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 KPIGCDCKDLSYKDRHWHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQEC
:::: : :.. ::.: ::..::.:..: . :... :.::....::. : . : : ::. :
CCDS55 KPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGC
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 KKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQ
:.:. : ...::::. ::. :: : :.: ::: ::.:: .. .:: :.: . : .::.
CCDS55 FKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 CKKPITTGGVTYREQPWHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGC
:.: ::.::.::..:::: .::::..: :.:.:::::: .: ::..:. .. :::::::
CCDS55 CNKAITSGGITYQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGC
190 200 210 220 230 240
230 240 250 260 270
pF1KB6 TNPISGLG-GTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
:::.:.: :.. ...: ..::. ::.:::::..:... :. ..... ::::.: .
CCDS55 KNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKKL
250 260 270 280 290
>>CCDS55505.1 FHL1 gene_id:2273|Hs108|chrX (309 aa)
initn: 1372 init1: 972 opt: 1158 Z-score: 606.3 bits: 120.2 E(32554): 1.9e-27
Smith-Waterman score: 1158; 48.2% identity (78.9% similar) in 280 aa overlap (1-279:30-309)
10 20 30
pF1KB6 MTERFDCHHCNESLFGKKYILREESPYCVVC
:.:.::::.: . : ::::. .. :. :
CCDS55 MTFYVASLALELIWMLSSPAGPSSYKVGTMAEKFDCHYCRDPLQGKKYVQKDGHHCCLKC
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 FETLFANTCEECGKPIGCDCKDLSYKDRHWHEACFHCSQCRNSLVDKPFAAKEDQLLCTD
:. . :::: :: :::: : :.. ::.: ::..::.:..: . :... :.::....::.
CCDS55 FDKFCANTCVECRKPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKILCNK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 CYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFCV
: . : : ::. : :.:. : ...::::. ::. :: : :.: ::: ::.:: .. .::
CCDS55 CTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCV
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 PCYEKQHAMQCVQCKKPITTGGVTYREQPWHKECFVCTACRKQLSGQRFTARDDFAYCLN
:.: . : .::.:.: ::.::.::..:::: .::::..: :.:.:::::: .: ::..
CCDS55 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVD
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 CFCDLYAKKCAGCTNPISGLG-GTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDI
:. .. ::::::: :::.:.: :.. ...: ..::. ::.:::::..:... :. .....
CCDS55 CYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQV
250 260 270 280 290 300
pF1KB6 LCPDCGKDI
::::.: .
CCDS55 YCPDCAKKL
>>CCDS55507.1 FHL1 gene_id:2273|Hs108|chrX (323 aa)
initn: 1344 init1: 963 opt: 979 Z-score: 517.6 bits: 103.8 E(32554): 1.6e-22
Smith-Waterman score: 979; 50.4% identity (77.8% similar) in 230 aa overlap (1-230:1-230)
10 20 30 40 50 60
pF1KB6 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRH
:.:.::::.: . : ::::. .. :. ::. . :::: :: :::: : :.. ::.:
CCDS55 MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 WHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGS
::..::.:..: . :... :.::....::. : . : : ::. : :.:. : ...::::.
CCDS55 WHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQP
::. :: : :.: ::: ::.:: .. .:: :.: . : .::.:.: ::.::.::..::
CCDS55 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFE
:: .::::..: :.:.:::::: .: ::..:. .. ::::::: :::.:
CCDS55 WHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGKRTVSRVSHP
190 200 210 220 230 240
250 260 270
pF1KB6 ERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
CCDS55 VSKARKPPVCHGKRLPLTLFPSANLRGRHPGGERTCPSWVVVLYRKNRSLAAPRGPGLVK
250 260 270 280 290 300
>>CCDS76036.1 FHL1 gene_id:2273|Hs108|chrX (194 aa)
initn: 658 init1: 658 opt: 658 Z-score: 361.3 bits: 74.2 E(32554): 8.3e-14
Smith-Waterman score: 658; 45.4% identity (74.1% similar) in 174 aa overlap (1-174:1-174)
10 20 30 40 50 60
pF1KB6 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRH
:.:.::::.: . : ::::. .. :. ::. . :::: :: :::: : :.. ::.:
CCDS76 MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 WHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGS
::..::.:..: . :... :.::....::. : . : : ::. : :.:. : ...::::.
CCDS76 WHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQP
::. :: : :.: ::: ::.:: .. .:: :.: . : .::.:.: .. . :
CCDS76 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKGLVKAPVWWPMKD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFE
CCDS76 NPGTTTASTAKNAP
190
>>CCDS83493.1 FHL1 gene_id:2273|Hs108|chrX (210 aa)
initn: 658 init1: 658 opt: 658 Z-score: 360.9 bits: 74.2 E(32554): 8.8e-14
Smith-Waterman score: 658; 45.4% identity (74.1% similar) in 174 aa overlap (1-174:17-190)
10 20 30 40
pF1KB6 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECG
:.:.::::.: . : ::::. .. :. ::. . :::: ::
CCDS83 MASHRHSGPSSYKVGTMAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 KPIGCDCKDLSYKDRHWHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQEC
:::: : :.. ::.: ::..::.:..: . :... :.::....::. : . : : ::. :
CCDS83 KPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGC
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 KKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQ
:.:. : ...::::. ::. :: : :.: ::: ::.:: .. .:: :.: . : .::.
CCDS83 FKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 CKKPITTGGVTYREQPWHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGC
:.: .. . :
CCDS83 CNKGLVKAPVWWPMKDNPGTTTASTAKNAP
190 200 210
279 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:26:21 2016 done: Mon Nov 7 01:26:22 2016
Total Scan time: 2.150 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]