Result of FASTA (omim) for
pFN21AB6362
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6362, 291 aa
1>>>pF1KB6362 291 - 291 aa - 291 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0117+/-0.00027; mu= 14.1416+/- 0.017
mean_var=115.1039+/-22.952, 0's: 0 Z-trim(122.7): 76 B-trim: 183 in 1/55
Lambda= 0.119544
statistics sampled from 41269 (41366) to 41269 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.811), E-opt: 0.2 (0.485), width: 16
Scan time: 8.780
The best scores are: opt bits E(85289)
XP_016867641 (OMIM: 146732) PREDICTED: insulin-lik ( 291) 2048 363.1 3.5e-100
NP_000589 (OMIM: 146732) insulin-like growth facto ( 291) 2048 363.1 3.5e-100
NP_001013416 (OMIM: 146732) insulin-like growth fa ( 297) 2026 359.3 4.9e-99
NP_000590 (OMIM: 146734) insulin-like growth facto ( 272) 805 148.7 1.1e-35
NP_000588 (OMIM: 146731) insulin-like growth facto ( 328) 501 96.4 7.9e-20
NP_001543 (OMIM: 146733) insulin-like growth facto ( 258) 396 78.2 1.9e-14
NP_000587 (OMIM: 146730) insulin-like growth facto ( 259) 338 68.2 1.9e-11
NP_002169 (OMIM: 146735) insulin-like growth facto ( 240) 306 62.6 8.4e-10
XP_016874753 (OMIM: 146735) PREDICTED: insulin-lik ( 136) 245 51.9 8.2e-07
NP_002766 (OMIM: 600142,602194,610149,616779) seri ( 480) 215 47.2 7.3e-05
NP_001300922 (OMIM: 146731) insulin-like growth fa ( 159) 204 44.9 0.00012
NP_001300921 (OMIM: 146731) insulin-like growth fa ( 159) 204 44.9 0.00012
NP_001300919 (OMIM: 146731) insulin-like growth fa ( 181) 204 44.9 0.00014
XP_016870188 (OMIM: 610413) PREDICTED: insulin-lik ( 174) 195 43.3 0.00039
NP_001007564 (OMIM: 610413) insulin-like growth fa ( 278) 195 43.5 0.00054
NP_004589 (OMIM: 602264) testican-1 precursor [Hom ( 439) 191 43.0 0.0012
XP_011538706 (OMIM: 607988) PREDICTED: testican-2 ( 421) 183 41.6 0.0031
NP_001231879 (OMIM: 607988) testican-2 isoform 2 p ( 424) 183 41.6 0.0031
NP_055582 (OMIM: 607988) testican-2 isoform 2 prec ( 424) 183 41.6 0.0031
NP_071421 (OMIM: 125400,607223) SPARC-related modu ( 457) 180 41.2 0.0046
XP_011534367 (OMIM: 125400,607223) PREDICTED: SPAR ( 475) 180 41.2 0.0048
NP_031387 (OMIM: 605399) nidogen-2 precursor [Homo (1375) 182 41.9 0.0081
XP_005267462 (OMIM: 605399) PREDICTED: nidogen-2 i (1402) 182 42.0 0.0082
NP_001191282 (OMIM: 607989) testican-3 isoform 4 [ ( 316) 173 39.8 0.0082
NP_001159884 (OMIM: 125400,607223) SPARC-related m ( 446) 175 40.3 0.0083
XP_011534368 (OMIM: 125400,607223) PREDICTED: SPAR ( 464) 175 40.3 0.0085
NP_001238896 (OMIM: 607989) testican-3 isoform 11 ( 338) 173 39.8 0.0086
NP_001191284 (OMIM: 607989) testican-3 isoform 6 [ ( 340) 173 39.8 0.0087
NP_001191283 (OMIM: 607989) testican-3 isoform 5 [ ( 344) 173 39.8 0.0087
NP_001129076 (OMIM: 601521) endothelial cell-speci ( 134) 167 38.4 0.0091
NP_001191281 (OMIM: 607989) testican-3 isoform 3 [ ( 385) 173 39.9 0.0095
NP_001191285 (OMIM: 607989) testican-3 isoform 7 p ( 393) 173 39.9 0.0096
>>XP_016867641 (OMIM: 146732) PREDICTED: insulin-like gr (291 aa)
initn: 2048 init1: 2048 opt: 2048 Z-score: 1919.6 bits: 363.1 E(85289): 3.5e-100
Smith-Waterman score: 2048; 99.7% identity (100.0% similar) in 291 aa overlap (1-291:1-291)
10 20 30 40 50 60
pF1KB6 MQRARPTLWAAALTLLVLLRGPPVARAGASSGGLGPVVRCEPCDARALAQCAPPPAVCAE
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
XP_016 MQRARPTLWAAALTLLVLLRGPPVARAGASSAGLGPVVRCEPCDARALAQCAPPPAVCAE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCVNASAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCVNASAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SRLRAYLLPAPPAPGNASESEEDRSAGSVESPSVSSTHRVSDPKFHPLHSKIIIIKKGHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRLRAYLLPAPPAPGNASESEEDRSAGSVESPSVSSTHRVSDPKFHPLHSKIIIIKKGHA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KDSQRYKVDYESQSTDTQNFSSESKRETEYGPCRREMEDTLNHLKFLNVLSPRGVHIPNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDSQRYKVDYESQSTDTQNFSSESKRETEYGPCRREMEDTLNHLKFLNVLSPRGVHIPNC
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 DKKGFYKKKQCRPSKGRKRGFCWCVDKYGQPLPGYTTKGKEDVHCYSMQSK
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DKKGFYKKKQCRPSKGRKRGFCWCVDKYGQPLPGYTTKGKEDVHCYSMQSK
250 260 270 280 290
>>NP_000589 (OMIM: 146732) insulin-like growth factor-bi (291 aa)
initn: 2048 init1: 2048 opt: 2048 Z-score: 1919.6 bits: 363.1 E(85289): 3.5e-100
Smith-Waterman score: 2048; 99.7% identity (100.0% similar) in 291 aa overlap (1-291:1-291)
10 20 30 40 50 60
pF1KB6 MQRARPTLWAAALTLLVLLRGPPVARAGASSGGLGPVVRCEPCDARALAQCAPPPAVCAE
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
NP_000 MQRARPTLWAAALTLLVLLRGPPVARAGASSAGLGPVVRCEPCDARALAQCAPPPAVCAE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCVNASAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCVNASAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SRLRAYLLPAPPAPGNASESEEDRSAGSVESPSVSSTHRVSDPKFHPLHSKIIIIKKGHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SRLRAYLLPAPPAPGNASESEEDRSAGSVESPSVSSTHRVSDPKFHPLHSKIIIIKKGHA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KDSQRYKVDYESQSTDTQNFSSESKRETEYGPCRREMEDTLNHLKFLNVLSPRGVHIPNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KDSQRYKVDYESQSTDTQNFSSESKRETEYGPCRREMEDTLNHLKFLNVLSPRGVHIPNC
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 DKKGFYKKKQCRPSKGRKRGFCWCVDKYGQPLPGYTTKGKEDVHCYSMQSK
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DKKGFYKKKQCRPSKGRKRGFCWCVDKYGQPLPGYTTKGKEDVHCYSMQSK
250 260 270 280 290
>>NP_001013416 (OMIM: 146732) insulin-like growth factor (297 aa)
initn: 1130 init1: 1130 opt: 2026 Z-score: 1899.0 bits: 359.3 E(85289): 4.9e-99
Smith-Waterman score: 2026; 97.6% identity (98.0% similar) in 297 aa overlap (1-291:1-297)
10 20 30 40 50 60
pF1KB6 MQRARPTLWAAALTLLVLLRGPPVARAGASSGGLGPVVRCEPCDARALAQCAPPPAVCAE
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
NP_001 MQRARPTLWAAALTLLVLLRGPPVARAGASSAGLGPVVRCEPCDARALAQCAPPPAVCAE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCVNASAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCVNASAV
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 SRLRAYLLPAPPAPG------NASESEEDRSAGSVESPSVSSTHRVSDPKFHPLHSKIII
::::::::::::::: :::::::::::::::::::::::::::::::::::::::
NP_001 SRLRAYLLPAPPAPGEPPAPGNASESEEDRSAGSVESPSVSSTHRVSDPKFHPLHSKIII
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 IKKGHAKDSQRYKVDYESQSTDTQNFSSESKRETEYGPCRREMEDTLNHLKFLNVLSPRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKKGHAKDSQRYKVDYESQSTDTQNFSSESKRETEYGPCRREMEDTLNHLKFLNVLSPRG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 VHIPNCDKKGFYKKKQCRPSKGRKRGFCWCVDKYGQPLPGYTTKGKEDVHCYSMQSK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VHIPNCDKKGFYKKKQCRPSKGRKRGFCWCVDKYGQPLPGYTTKGKEDVHCYSMQSK
250 260 270 280 290
>>NP_000590 (OMIM: 146734) insulin-like growth factor-bi (272 aa)
initn: 812 init1: 372 opt: 805 Z-score: 761.4 bits: 148.7 E(85289): 1.1e-35
Smith-Waterman score: 817; 44.0% identity (67.6% similar) in 293 aa overlap (8-290:3-268)
10 20 30 40 50 60
pF1KB6 MQRARPTLWAAALTLLVLLRGPPVARAGASSGGLGPVVRCEPCDARALAQCAPPPAVCAE
: .:.: ::. :: :.: :: :.::::: .::..: : : : :
NP_000 MVLLTAVLLLLAAYAGP------AQS--LGSFVHCEPCDEKALSMCPPSPLGC-E
10 20 30 40
70 80 90 100 110 120
pF1KB6 LVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCVNASAV
::.:::::::.::::.::: ::.:::::..:::: : :: .::.::: :::.:.: ..
NP_000 LVKEPGCGCCMTCALAEGQSCGVYTERCAQGLRCLPRQDEEKPLHALLHGRGVCLNEKSY
50 60 70 80 90 100
130 140 150 160 170
pF1KB6 SRLRAYLLPAPPAPGNASESEEDRSAGSVESPSVSS-THRVSDPK-FHPLHSKIIIIKKG
. . . .:.. : :..: .... .:: :.: :..: .:
NP_000 RE----------------QVKIERDSREHEEPTTSEMAEETYSPKIFRPKHTRISELKAE
110 120 130 140 150
180 190 200 210 220 230
pF1KB6 HAKDSQRYKVDYESQSTDTQNFSS-------ESKRETEYGPCRREMEDTLNHLKFLNVLS
.: ..: :. . ..: . : ..:.: :::::.:: .:..:: .
NP_000 AVKKDRRKKLTQSKFVGGAENTAHPRIISAPEMRQESEQGPCRRHMEASLQELKASPRMV
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB6 PRGVHIPNCDKKGFYKKKQCRPSKGRKRGFCWCVDKYGQPLPGYT-TKGKEDVHCYSMQS
::.:..::::.:::::.:::.::.:::::.::::::::. :::. . : : .:....:
NP_000 PRAVYLPNCDRKGFYKRKQCKPSRGRKRGICWCVDKYGMKLPGMEYVDG--DFQCHTFDS
220 230 240 250 260
pF1KB6 K
NP_000 SNVE
270
>>NP_000588 (OMIM: 146731) insulin-like growth factor-bi (328 aa)
initn: 537 init1: 303 opt: 501 Z-score: 477.0 bits: 96.4 E(85289): 7.9e-20
Smith-Waterman score: 538; 33.4% identity (57.7% similar) in 293 aa overlap (28-286:29-312)
10 20 30 40 50
pF1KB6 MQRARPTLWAAALTLLVLLRGPPVARAGASSGGLGP----VVRCEPCDARALAQCAPPP
:::.:: : . :: :: . :: :.:::
NP_000 MLPRVGCPALPLPPPPLLPLLPLLLLLLGASGGGGGARAEVLFRCPPCTPERLAACGPPP
10 20 30 40 50 60
60 70 80 90 100
pF1KB6 AV---------------CAELVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDE
.. ::::::::::::: .:: ::. ::.:: :::.:::: : :
NP_000 VAPPAAVAAVAGGARMPCAELVREPGCGCCSVCARLEGEACGVYTPRCGQGLRCYPHPGS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 ARPLQALLDGRGLCVNASAVSRLRAYLLPAPPAPGNASESEEDRSAGSVESPSVSSTHRV
:::::. :.: : . : : : ..... .:.: :.. :.:: .
NP_000 ELPLQALVMGEGTC------EKRRDAEYGASPE--QVADNGDDHSEGGLVENHVDSTMNM
130 140 150 160 170
170 180 190 200 210
pF1KB6 ----SDPKFHPLHS--KIIIIKKGHAKDSQRYKVDYESQSTDTQNFSSESKRETEYGPCR
.. .::.: : . . . .. ...: .. .. . .. . ::.
NP_000 LGGGGSAGRKPLKSGMKELAVFREKVTEQHR-QMGKGGKHHLGLEEPKKLRPPPARTPCQ
180 190 200 210 220 230
220 230 240 250 260
pF1KB6 REMEDTLNHLKFLNVLSPRG-------VHIPNCDKKGFYKKKQCRPSKGRKRGFCWCVD-
.:....:.... . . . :: .:::::::.:.:. :::. : . .:: ::::.
NP_000 QELDQVLERISTMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNGQRGECWCVNP
240 250 260 270 280 290
270 280 290
pF1KB6 KYGQPLPGYTT-KGKEDVHCYSMQSK
. :. . : : .: . : .
NP_000 NTGKLIQGAPTIRGDPECHLFYNEQQEARGVHTQRMQ
300 310 320
>>NP_001543 (OMIM: 146733) insulin-like growth factor-bi (258 aa)
initn: 562 init1: 337 opt: 396 Z-score: 380.5 bits: 78.2 E(85289): 1.9e-14
Smith-Waterman score: 554; 35.4% identity (58.4% similar) in 274 aa overlap (16-284:10-250)
10 20 30 40 50 60
pF1KB6 MQRARPTLWAAALTLLVLLRGPPVARAGASSGGLGPVVRCEPCDARALAQCAPPPAVCAE
:.: :: : : : ...: ::. . ::.: :: . : :
NP_001 MLPLCLVAALLLAAGP-----GPSLGD--EAIHCPPCSEEKLARCRPPVG-CEE
10 20 30 40
70 80 90 100 110 120
pF1KB6 LVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCVNASAV
:::::::::: ::::. :.:::.:: :::::::: : .::..:. :.:.:.. . .
NP_001 LVREPGCGCCATCALGLGMPCGVYTPRCGSGLRCYPPRGVEKPLHTLMHGQGVCMELAEI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 SRLRAYLLPAPPAPGNASESEEDRSAGSVESPSVSSTHRVSDPKFHPLHSKIIIIKKGHA
.. : : :...: .. :: . .: . .: .:: . ..
NP_001 EAIQESLQP--------SDKDEGDHPNNSFSPCSAHDRRCLQKHF----AKI----RDRS
110 120 130 140 150
190 200 210 220 230
pF1KB6 KDSQRYKVDYESQSTDTQNFSSESKRETEYGPCRREMEDTLNHLKFLNVLSPRGVHI---
.. ..::. . :. : . : :. :.. .:..: . . . ..:
NP_001 TSGGKMKVNGAPR---------EDARPVPQGSCQSELHRALERLAASQSRTHEDLYIIPI
160 170 180 190 200
240 250 260 270 280 290
pF1KB6 PNCDKKGFYKKKQCRPSKGRKRGFCWCVD-KYGQPLPG-YTTKGKEDVHCYSMQSK
::::..: .. :::.:. .:: ::::: : : ::: ::. : :
NP_001 PNCDRNGNFHPKQCHPALDGQRGKCWCVDRKTGVKLPGGLEPKGELDCHQLADSFRE
210 220 230 240 250
>>NP_000587 (OMIM: 146730) insulin-like growth factor-bi (259 aa)
initn: 493 init1: 323 opt: 338 Z-score: 326.4 bits: 68.2 E(85289): 1.9e-11
Smith-Waterman score: 447; 33.0% identity (57.3% similar) in 279 aa overlap (13-285:11-251)
10 20 30 40 50 60
pF1KB6 MQRARPTLWAAALTLLVLLRGPPVARAGASSGGLGPVVRCEPCDARALAQCAPPPAVCAE
:.::.: ....:...:. : .: ::.:. :: : : : :.:
NP_000 MSEVPVARVWLVLLLL-----TVQVGVTAGA--PW-QCAPCSAEKLALCPPVSASCSE
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 LVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCVNASAV
..: ::::: ::: : ::. : ::. :: :. : : .::.:: :.: ::. : .
NP_000 VTRSAGCGCCPMCALPLGAACGVATARCARGLSCRALPGEQQPLHALTRGQGACVQESDA
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 SRLRAYLLPAPPAPGNASESEEDRSAGSVESP-SVSSTHRVSDPKFHPLHSKIIIIKKGH
: :: .:.: ::: ::: :. :.. .:: .
NP_000 S--------AP----HAAE------AGSPESPESTEITEEELLDNFHLM-----------
120 130 140
180 190 200 210 220 230
pF1KB6 AKDSQRYKVDYESQST-DTQNFSSESKRETEYGPCRREMEDTLNHLKFLNVLSPRGV---
: . . ... ... :: : .. .. . ::: :. ... : . : . .
NP_000 APSEEDHSILWDAISTYDGSKALHVTNIKKWKEPCRIELYRVVESLAKAQETSGEEISKF
150 160 170 180 190 200
240 250 260 270 280 290
pF1KB6 HIPNCDKKGFYKKKQCRPSKGRKRGFCWCVDKY-GQPLPGYTTKGKEDVHCYSMQSK
..:::.:.:::...::. : . :.:::: . :. .:: . . . : .:
NP_000 YLPNCNKNGFYHSRQCETSMDGEAGLCWCVYPWNGKRIPG-SPEIRGDPNCQIYFNVQN
210 220 230 240 250
>>NP_002169 (OMIM: 146735) insulin-like growth factor-bi (240 aa)
initn: 516 init1: 298 opt: 306 Z-score: 297.0 bits: 62.6 E(85289): 8.4e-10
Smith-Waterman score: 481; 34.8% identity (58.0% similar) in 264 aa overlap (29-290:19-239)
10 20 30 40 50 60
pF1KB6 MQRARPTLWAAALTLLVLLRGPPVARAGASSGGLGPVVRCEPCDARALAQCAPPPAVCAE
:.: : : ..:: : . : : : : :
NP_002 MTPHRLLPPLLLLLALLLAASPG-GALARCPGCGQGVQAGC-PGGCVEEE
10 20 30 40
70 80 90 100 110
pF1KB6 LVREPGCGCCLT--CALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCVNAS
:. :: . : ::: ::.:: :. ::.:.: :. ::.::: ::: :
NP_002 DGGSPAEGCAEAEGCLRREGQECGVYTPNCAPGLQCHPPKDDEAPLRALLLGRGRC----
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB6 AVSRLRAYLLPAPPAPGNASESEEDRSAGSVESPSVSSTHRVSDPKFHPLHSKIIIIKKG
::: ::. : :. . :: ..: : .: ...
NP_002 ---------LPAR-APAVAEENPK-------ESKPQAGTARPQD------------VNR-
110 120 130
180 190 200 210 220 230
pF1KB6 HAKDSQRYKVDYESQSTDTQNFSSESKRETEYGPCRREMEDTLNHLKFLNVLSPRGVHIP
.:.:: . ...: .: .: . ..::.:::::.....:..:. . . ...:
NP_002 --RDQQR---NPGTSTTPSQP-NSAGVQDTEMGPCRRHLDSVLQQLQTEVYRGAQTLYVP
140 150 160 170 180
240 250 260 270 280 290
pF1KB6 NCDKKGFYKKKQCRPSKGRKRGFCWCVDKYGQPLPGYTTKGKEDVHCYSMQSK
:::..:::.:.::: :.:..:: :::::..:. ::: . :. . : . .:
NP_002 NCDHRGFYRKRQCRSSQGQRRGPCWCVDRMGKSLPG-SPDGNGSSSCPTGSSG
190 200 210 220 230 240
>>XP_016874753 (OMIM: 146735) PREDICTED: insulin-like gr (136 aa)
initn: 248 init1: 198 opt: 245 Z-score: 243.3 bits: 51.9 E(85289): 8.2e-07
Smith-Waterman score: 245; 40.5% identity (54.1% similar) in 111 aa overlap (29-135:19-127)
10 20 30 40 50 60
pF1KB6 MQRARPTLWAAALTLLVLLRGPPVARAGASSGGLGPVVRCEPCDARALAQCAPPPAVCAE
:.: : : ..:: : . : : : : :
XP_016 MTPHRLLPPLLLLLALLLAASPG-GALARCPGCGQGVQAGC-PGGCVEEE
10 20 30 40
70 80 90 100 110
pF1KB6 LVREPGCGCCLT--CALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCVNAS
:. :: . : ::: ::.:: :. ::.:.: :. ::.::: ::: :. :
XP_016 DGGSPAEGCAEAEGCLRREGQECGVYTPNCAPGLQCHPPKDDEAPLRALLLGRGRCLPAR
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB6 AVSRLRA--YLLPAPPAPGNASESEEDRSAGSVESPSVSSTHRVSDPKFHPLHSKIIIIK
: . : . : : ::
XP_016 APAVLSSPRTLRKLSPEPGATCSCRGES
110 120 130
>>NP_002766 (OMIM: 600142,602194,610149,616779) serine p (480 aa)
initn: 205 init1: 128 opt: 215 Z-score: 208.3 bits: 47.2 E(85289): 7.3e-05
Smith-Waterman score: 215; 39.0% identity (53.4% similar) in 118 aa overlap (10-119:6-115)
10 20 30 40 50
pF1KB6 MQRARPTLWAAALTLLVLLRGPP----VARAGASSG-GLGPVVRCEPCDARALAQCAPPP
:: : ::.:: . : ..::: :. . : :::: :.: : :
NP_002 MQIPRAALLPLLLLLLAAPASAQLSRAGRSAPLAAGCPDRCEP------ARCPPQP
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 AVCAELVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGR---G
: . .:::: .:. :: ::. :: ::.: : . : .: . : :
NP_002 EHCEGGRARDACGCCEVCGAPEGAACGLQEGPCGEGLQCV-VP-FGVPASATVRRRAQAG
60 70 80 90 100
120 130 140 150 160 170
pF1KB6 LCVNASAVSRLRAYLLPAPPAPGNASESEEDRSAGSVESPSVSSTHRVSDPKFHPLHSKI
::: ::.
NP_002 LCVCASSEPVCGSDANTYANLCQLRAASRRSERLHRPPVIVLQRGACGQGQEDPNSLRHK
110 120 130 140 150 160
291 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:40:07 2016 done: Sun Nov 6 23:40:08 2016
Total Scan time: 8.780 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]