Result of FASTA (omim) for
pFN21AB6255
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6255, 762 aa
1>>>pF1KB6255 762 - 762 aa - 762 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8669+/-0.000444; mu= 17.2637+/- 0.027
mean_var=79.5112+/-15.443, 0's: 0 Z-trim(109.5): 35 B-trim: 327 in 1/52
Lambda= 0.143834
statistics sampled from 17640 (17672) to 17640 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.559), E-opt: 0.2 (0.207), width: 16
Scan time: 11.250
The best scores are: opt bits E(85289)
NP_001309970 (OMIM: 604950) putative homeodomain t ( 762) 5031 1054.6 0
NP_001309972 (OMIM: 604950) putative homeodomain t ( 762) 5031 1054.6 0
NP_001309971 (OMIM: 604950) putative homeodomain t ( 762) 5031 1054.6 0
NP_006599 (OMIM: 604950) putative homeodomain tran ( 762) 5031 1054.6 0
NP_001309974 (OMIM: 604950) putative homeodomain t ( 720) 4749 996.0 0
NP_001309973 (OMIM: 604950) putative homeodomain t ( 720) 4749 996.0 0
NP_001309977 (OMIM: 604950) putative homeodomain t ( 637) 4216 885.4 0
NP_001309976 (OMIM: 604950) putative homeodomain t ( 637) 4216 885.4 0
NP_001309978 (OMIM: 604950) putative homeodomain t ( 637) 4216 885.4 0
NP_001309979 (OMIM: 604950) putative homeodomain t ( 595) 3934 826.9 0
NP_001309982 (OMIM: 604950) putative homeodomain t ( 575) 3735 785.6 0
NP_001309981 (OMIM: 604950) putative homeodomain t ( 575) 3735 785.6 0
NP_001309980 (OMIM: 604950) putative homeodomain t ( 533) 3453 727.0 4.8e-209
NP_001309975 (OMIM: 604950) putative homeodomain t ( 476) 3103 654.4 3.2e-187
XP_011514726 (OMIM: 616785) PREDICTED: putative ho ( 610) 1782 380.3 1.3e-104
NP_065165 (OMIM: 616785) putative homeodomain tran ( 747) 1782 380.4 1.5e-104
NP_001120830 (OMIM: 616785) putative homeodomain t ( 747) 1782 380.4 1.5e-104
XP_005250566 (OMIM: 616785) PREDICTED: putative ho ( 751) 1782 380.4 1.5e-104
NP_001120829 (OMIM: 616785) putative homeodomain t ( 751) 1782 380.4 1.5e-104
XP_005250565 (OMIM: 616785) PREDICTED: putative ho ( 751) 1782 380.4 1.5e-104
XP_016867948 (OMIM: 616785) PREDICTED: putative ho ( 674) 1599 342.4 3.8e-93
XP_011514725 (OMIM: 616785) PREDICTED: putative ho ( 678) 1599 342.4 3.8e-93
XP_006716126 (OMIM: 616785) PREDICTED: putative ho ( 708) 1380 296.9 1.9e-79
XP_016867947 (OMIM: 616785) PREDICTED: putative ho ( 703) 869 190.9 1.6e-47
XP_011514724 (OMIM: 616785) PREDICTED: putative ho ( 707) 869 190.9 1.6e-47
NP_001120832 (OMIM: 616785) putative homeodomain t ( 352) 822 181.0 7.5e-45
NP_001120831 (OMIM: 616785) putative homeodomain t ( 356) 804 177.3 1e-43
>>NP_001309970 (OMIM: 604950) putative homeodomain trans (762 aa)
initn: 5031 init1: 5031 opt: 5031 Z-score: 5641.3 bits: 1054.6 E(85289): 0
Smith-Waterman score: 5031; 100.0% identity (100.0% similar) in 762 aa overlap (1-762:1-762)
10 20 30 40 50 60
pF1KB6 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPF
670 680 690 700 710 720
730 740 750 760
pF1KB6 RLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRLWKIKS
::::::::::::::::::::::::::::::::::::::::::
NP_001 RLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRLWKIKS
730 740 750 760
>>NP_001309972 (OMIM: 604950) putative homeodomain trans (762 aa)
initn: 5031 init1: 5031 opt: 5031 Z-score: 5641.3 bits: 1054.6 E(85289): 0
Smith-Waterman score: 5031; 100.0% identity (100.0% similar) in 762 aa overlap (1-762:1-762)
10 20 30 40 50 60
pF1KB6 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPF
670 680 690 700 710 720
730 740 750 760
pF1KB6 RLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRLWKIKS
::::::::::::::::::::::::::::::::::::::::::
NP_001 RLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRLWKIKS
730 740 750 760
>>NP_001309971 (OMIM: 604950) putative homeodomain trans (762 aa)
initn: 5031 init1: 5031 opt: 5031 Z-score: 5641.3 bits: 1054.6 E(85289): 0
Smith-Waterman score: 5031; 100.0% identity (100.0% similar) in 762 aa overlap (1-762:1-762)
10 20 30 40 50 60
pF1KB6 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPF
670 680 690 700 710 720
730 740 750 760
pF1KB6 RLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRLWKIKS
::::::::::::::::::::::::::::::::::::::::::
NP_001 RLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRLWKIKS
730 740 750 760
>>NP_006599 (OMIM: 604950) putative homeodomain transcri (762 aa)
initn: 5031 init1: 5031 opt: 5031 Z-score: 5641.3 bits: 1054.6 E(85289): 0
Smith-Waterman score: 5031; 100.0% identity (100.0% similar) in 762 aa overlap (1-762:1-762)
10 20 30 40 50 60
pF1KB6 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 LASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPF
670 680 690 700 710 720
730 740 750 760
pF1KB6 RLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRLWKIKS
::::::::::::::::::::::::::::::::::::::::::
NP_006 RLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRLWKIKS
730 740 750 760
>>NP_001309974 (OMIM: 604950) putative homeodomain trans (720 aa)
initn: 4749 init1: 4749 opt: 4749 Z-score: 5325.5 bits: 996.0 E(85289): 0
Smith-Waterman score: 4749; 100.0% identity (100.0% similar) in 720 aa overlap (43-762:1-720)
20 30 40 50 60 70
pF1KB6 QKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGSTFAKAKPEIPWTS
::::::::::::::::::::::::::::::
NP_001 MGHIKPDLIDVDLIRGSTFAKAKPEIPWTS
10 20 30
80 90 100 110 120 130
pF1KB6 LTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMMPIVNISEVLGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMMPIVNISEVLGPL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 CLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNNSSDKVRGIETLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNNSSDKVRGIETLE
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 SVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRPEIRMWQTREKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRPEIRMWQTREKAK
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB6 FSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSDNGCEVKNRKSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSDNGCEVKNRKSIL
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB6 SRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSRSLNMSRRDSEST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSRSLNMSRRDSEST
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB6 RHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDVFQQNHLFWLQNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDVFQQNHLFWLQNS
340 350 360 370 380 390
440 450 460 470 480 490
pF1KB6 SPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLGNVVTIGLAFFPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLGNVVTIGLAFFPF
400 410 420 430 440 450
500 510 520 530 540 550
pF1KB6 LHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCLTWMFFFMMCVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCLTWMFFFMMCVAE
460 470 480 490 500 510
560 570 580 590 600 610
pF1KB6 RTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYLKRRGPQRSVDVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYLKRRGPQRSVDVV
520 530 540 550 560 570
620 630 640 650 660 670
pF1KB6 VSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLRLASLGSETNKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLRLASLGSETNKKY
580 590 600 610 620 630
680 690 700 710 720 730
pF1KB6 SNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPFRLYGLTMNPLIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPFRLYGLTMNPLIY
640 650 660 670 680 690
740 750 760
pF1KB6 NITRVVILSAVSGVISDLLGFNIRLWKIKS
::::::::::::::::::::::::::::::
NP_001 NITRVVILSAVSGVISDLLGFNIRLWKIKS
700 710 720
>>NP_001309973 (OMIM: 604950) putative homeodomain trans (720 aa)
initn: 4749 init1: 4749 opt: 4749 Z-score: 5325.5 bits: 996.0 E(85289): 0
Smith-Waterman score: 4749; 100.0% identity (100.0% similar) in 720 aa overlap (43-762:1-720)
20 30 40 50 60 70
pF1KB6 QKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGSTFAKAKPEIPWTS
::::::::::::::::::::::::::::::
NP_001 MGHIKPDLIDVDLIRGSTFAKAKPEIPWTS
10 20 30
80 90 100 110 120 130
pF1KB6 LTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMMPIVNISEVLGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMMPIVNISEVLGPL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 CLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNNSSDKVRGIETLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNNSSDKVRGIETLE
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 SVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRPEIRMWQTREKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRPEIRMWQTREKAK
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB6 FSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSDNGCEVKNRKSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSDNGCEVKNRKSIL
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB6 SRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSRSLNMSRRDSEST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSRSLNMSRRDSEST
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB6 RHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDVFQQNHLFWLQNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDVFQQNHLFWLQNS
340 350 360 370 380 390
440 450 460 470 480 490
pF1KB6 SPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLGNVVTIGLAFFPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLGNVVTIGLAFFPF
400 410 420 430 440 450
500 510 520 530 540 550
pF1KB6 LHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCLTWMFFFMMCVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCLTWMFFFMMCVAE
460 470 480 490 500 510
560 570 580 590 600 610
pF1KB6 RTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYLKRRGPQRSVDVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYLKRRGPQRSVDVV
520 530 540 550 560 570
620 630 640 650 660 670
pF1KB6 VSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLRLASLGSETNKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLRLASLGSETNKKY
580 590 600 610 620 630
680 690 700 710 720 730
pF1KB6 SNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPFRLYGLTMNPLIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPFRLYGLTMNPLIY
640 650 660 670 680 690
740 750 760
pF1KB6 NITRVVILSAVSGVISDLLGFNIRLWKIKS
::::::::::::::::::::::::::::::
NP_001 NITRVVILSAVSGVISDLLGFNIRLWKIKS
700 710 720
>>NP_001309977 (OMIM: 604950) putative homeodomain trans (637 aa)
initn: 4212 init1: 4212 opt: 4216 Z-score: 4728.5 bits: 885.4 E(85289): 0
Smith-Waterman score: 4216; 99.5% identity (99.7% similar) in 635 aa overlap (1-635:1-635)
10 20 30 40 50 60
pF1KB6 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLR
::::::::::::::::::::::::::::::: .:
NP_001 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVKVSHLL
610 620 630
670 680 690 700 710 720
pF1KB6 LASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPF
>>NP_001309976 (OMIM: 604950) putative homeodomain trans (637 aa)
initn: 4212 init1: 4212 opt: 4216 Z-score: 4728.5 bits: 885.4 E(85289): 0
Smith-Waterman score: 4216; 99.5% identity (99.7% similar) in 635 aa overlap (1-635:1-635)
10 20 30 40 50 60
pF1KB6 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLR
::::::::::::::::::::::::::::::: .:
NP_001 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVKVSHLL
610 620 630
670 680 690 700 710 720
pF1KB6 LASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPF
>>NP_001309978 (OMIM: 604950) putative homeodomain trans (637 aa)
initn: 4212 init1: 4212 opt: 4216 Z-score: 4728.5 bits: 885.4 E(85289): 0
Smith-Waterman score: 4216; 99.5% identity (99.7% similar) in 635 aa overlap (1-635:1-635)
10 20 30 40 50 60
pF1KB6 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLR
::::::::::::::::::::::::::::::: .:
NP_001 KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVKVSHLL
610 620 630
670 680 690 700 710 720
pF1KB6 LASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPF
>>NP_001309979 (OMIM: 604950) putative homeodomain trans (595 aa)
initn: 3930 init1: 3930 opt: 3934 Z-score: 4412.7 bits: 826.9 E(85289): 0
Smith-Waterman score: 3934; 99.5% identity (99.7% similar) in 593 aa overlap (43-635:1-593)
20 30 40 50 60 70
pF1KB6 QKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGSTFAKAKPEIPWTS
::::::::::::::::::::::::::::::
NP_001 MGHIKPDLIDVDLIRGSTFAKAKPEIPWTS
10 20 30
80 90 100 110 120 130
pF1KB6 LTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMMPIVNISEVLGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMMPIVNISEVLGPL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 CLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNNSSDKVRGIETLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNNSSDKVRGIETLE
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 SVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRPEIRMWQTREKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRPEIRMWQTREKAK
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB6 FSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSDNGCEVKNRKSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSDNGCEVKNRKSIL
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB6 SRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSRSLNMSRRDSEST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSRSLNMSRRDSEST
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB6 RHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDVFQQNHLFWLQNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDVFQQNHLFWLQNS
340 350 360 370 380 390
440 450 460 470 480 490
pF1KB6 SPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLGNVVTIGLAFFPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLGNVVTIGLAFFPF
400 410 420 430 440 450
500 510 520 530 540 550
pF1KB6 LHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCLTWMFFFMMCVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCLTWMFFFMMCVAE
460 470 480 490 500 510
560 570 580 590 600 610
pF1KB6 RTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYLKRRGPQRSVDVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYLKRRGPQRSVDVV
520 530 540 550 560 570
620 630 640 650 660 670
pF1KB6 VSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLRLASLGSETNKKY
::::::::::::::::::: .:
NP_001 VSSVFLLTLSIAFICCAQVKVSHLL
580 590
762 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:25:58 2016 done: Sun Nov 6 05:26:00 2016
Total Scan time: 11.250 Total Display time: 0.230
Function used was FASTA [36.3.4 Apr, 2011]