Result of FASTA (ccds) for
pFN21AB6251
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6251, 760 aa
1>>>pF1KB6251 760 - 760 aa - 760 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0971+/-0.00107; mu= 11.2594+/- 0.065
mean_var=101.6192+/-19.932, 0's: 0 Z-trim(104.9): 41 B-trim: 0 in 0/52
Lambda= 0.127229
statistics sampled from 8126 (8151) to 8126 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.608), E-opt: 0.2 (0.25), width: 16
Scan time: 3.290
The best scores are: opt bits E(32554)
CCDS5601.1 DMTF1 gene_id:9988|Hs108|chr7 ( 760) 4955 920.8 0
CCDS47633.1 DMTF1 gene_id:9988|Hs108|chr7 ( 672) 4385 816.1 0
>>CCDS5601.1 DMTF1 gene_id:9988|Hs108|chr7 (760 aa)
initn: 4955 init1: 4955 opt: 4955 Z-score: 4918.3 bits: 920.8 E(32554): 0
Smith-Waterman score: 4955; 100.0% identity (100.0% similar) in 760 aa overlap (1-760:1-760)
10 20 30 40 50 60
pF1KB6 MSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIEPPHKRLCLSSED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIEPPHKRLCLSSED
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DQSIDDSTPCISVVALPLSENDQSFEVTMTATTEVADDEVTEGTVTQIQILQNEQLDEIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DQSIDDSTPCISVVALPLSENDQSFEVTMTATTEVADDEVTEGTVTQIQILQNEQLDEIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PLGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDILMNNIERYLKARGIKDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PLGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDILMNNIERYLKARGIKDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMYDDRNHVGKYTPEEIEKLKELRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMYDDRNHVGKYTPEEIEKLKELRI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 KHGNDWATIGAALGRSASSVKDRCRLMKDTCNTGKWTEEEEKRLAEVVHELTSTEPGDIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KHGNDWATIGAALGRSASSVKDRCRLMKDTCNTGKWTEEEEKRLAEVVHELTSTEPGDIV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 TQGVSWAAVAERVGTRSEKQCRSKWLNYLNWKQSGGTEWTKEDEINLILRIAELDVADEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TQGVSWAAVAERVGTRSEKQCRSKWLNYLNWKQSGGTEWTKEDEINLILRIAELDVADEN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 DINWDLLAEGWSSVRSPQWLRSKWWTIKRQIANHKDVSFPVLIKGLKQLHENQKNNPTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DINWDLLAEGWSSVRSPQWLRSKWWTIKRQIANHKDVSFPVLIKGLKQLHENQKNNPTLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 ENKSGSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQIPVQITHVSSADSPATVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ENKSGSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQIPVQITHVSSADSPATVD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 SETITLNSGTLQTFEILPSFHLQPTGTPGTYLLQTSSSQGLPLTLTASPTVTLTAAAPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SETITLNSGTLQTFEILPSFHLQPTGTPGTYLLQTSSSQGLPLTLTASPTVTLTAAAPAS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 PEQIIVHALSPEHLLNTSDNVTVQCHTPRVIIQTVATEDITSSISQAELTVDSDIQSSDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PEQIIVHALSPEHLLNTSDNVTVQCHTPRVIIQTVATEDITSSISQAELTVDSDIQSSDF
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 PEPPDALEADTFPDEIHHPKMTVEPSFNDAHVSKFSDQNSTELMNSVMVRTEEEISDTDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PEPPDALEADTFPDEIHHPKMTVEPSFNDAHVSKFSDQNSTELMNSVMVRTEEEISDTDL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 KQEESPSDLASAYVTEGLESPTIEEQVDQTIDDETILIVPSPHGFIQASDVIDTESVLPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KQEESPSDLASAYVTEGLESPTIEEQVDQTIDDETILIVPSPHGFIQASDVIDTESVLPL
670 680 690 700 710 720
730 740 750 760
pF1KB6 TTLTDPILQHHQEESNIIGSSLGSPVSEDSKDVEDLVNCH
::::::::::::::::::::::::::::::::::::::::
CCDS56 TTLTDPILQHHQEESNIIGSSLGSPVSEDSKDVEDLVNCH
730 740 750 760
>>CCDS47633.1 DMTF1 gene_id:9988|Hs108|chr7 (672 aa)
initn: 4385 init1: 4385 opt: 4385 Z-score: 4353.7 bits: 816.1 E(32554): 0
Smith-Waterman score: 4385; 100.0% identity (100.0% similar) in 672 aa overlap (89-760:1-672)
60 70 80 90 100 110
pF1KB6 EDDQSIDDSTPCISVVALPLSENDQSFEVTMTATTEVADDEVTEGTVTQIQILQNEQLDE
::::::::::::::::::::::::::::::
CCDS47 MTATTEVADDEVTEGTVTQIQILQNEQLDE
10 20 30
120 130 140 150 160 170
pF1KB6 ISPLGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDILMNNIERYLKARGIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ISPLGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDILMNNIERYLKARGIK
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB6 DATEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMYDDRNHVGKYTPEEIEKLKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DATEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMYDDRNHVGKYTPEEIEKLKEL
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB6 RIKHGNDWATIGAALGRSASSVKDRCRLMKDTCNTGKWTEEEEKRLAEVVHELTSTEPGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RIKHGNDWATIGAALGRSASSVKDRCRLMKDTCNTGKWTEEEEKRLAEVVHELTSTEPGD
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB6 IVTQGVSWAAVAERVGTRSEKQCRSKWLNYLNWKQSGGTEWTKEDEINLILRIAELDVAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IVTQGVSWAAVAERVGTRSEKQCRSKWLNYLNWKQSGGTEWTKEDEINLILRIAELDVAD
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB6 ENDINWDLLAEGWSSVRSPQWLRSKWWTIKRQIANHKDVSFPVLIKGLKQLHENQKNNPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ENDINWDLLAEGWSSVRSPQWLRSKWWTIKRQIANHKDVSFPVLIKGLKQLHENQKNNPT
280 290 300 310 320 330
420 430 440 450 460 470
pF1KB6 LLENKSGSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQIPVQITHVSSADSPAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LLENKSGSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQIPVQITHVSSADSPAT
340 350 360 370 380 390
480 490 500 510 520 530
pF1KB6 VDSETITLNSGTLQTFEILPSFHLQPTGTPGTYLLQTSSSQGLPLTLTASPTVTLTAAAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VDSETITLNSGTLQTFEILPSFHLQPTGTPGTYLLQTSSSQGLPLTLTASPTVTLTAAAP
400 410 420 430 440 450
540 550 560 570 580 590
pF1KB6 ASPEQIIVHALSPEHLLNTSDNVTVQCHTPRVIIQTVATEDITSSISQAELTVDSDIQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ASPEQIIVHALSPEHLLNTSDNVTVQCHTPRVIIQTVATEDITSSISQAELTVDSDIQSS
460 470 480 490 500 510
600 610 620 630 640 650
pF1KB6 DFPEPPDALEADTFPDEIHHPKMTVEPSFNDAHVSKFSDQNSTELMNSVMVRTEEEISDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DFPEPPDALEADTFPDEIHHPKMTVEPSFNDAHVSKFSDQNSTELMNSVMVRTEEEISDT
520 530 540 550 560 570
660 670 680 690 700 710
pF1KB6 DLKQEESPSDLASAYVTEGLESPTIEEQVDQTIDDETILIVPSPHGFIQASDVIDTESVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DLKQEESPSDLASAYVTEGLESPTIEEQVDQTIDDETILIVPSPHGFIQASDVIDTESVL
580 590 600 610 620 630
720 730 740 750 760
pF1KB6 PLTTLTDPILQHHQEESNIIGSSLGSPVSEDSKDVEDLVNCH
::::::::::::::::::::::::::::::::::::::::::
CCDS47 PLTTLTDPILQHHQEESNIIGSSLGSPVSEDSKDVEDLVNCH
640 650 660 670
760 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 18:08:22 2016 done: Mon Nov 7 18:08:22 2016
Total Scan time: 3.290 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]