Result of FASTA (omim) for
pFN21AB5872
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5872, 384 aa
1>>>pF1KB5872 384 - 384 aa - 384 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.1949+/-0.000336; mu= 0.8749+/- 0.021
mean_var=251.6909+/-53.092, 0's: 0 Z-trim(123.7): 145 B-trim: 3731 in 2/58
Lambda= 0.080843
statistics sampled from 43719 (43881) to 43719 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.809), E-opt: 0.2 (0.514), width: 16
Scan time: 9.360
The best scores are: opt bits E(85289)
NP_003193 (OMIM: 189908) transcription factor 7 is ( 384) 2640 320.4 4.5e-87
XP_006714747 (OMIM: 189908) PREDICTED: transcripti ( 365) 2463 299.7 7.1e-81
XP_006714742 (OMIM: 189908) PREDICTED: transcripti ( 429) 2463 299.8 8e-81
NP_998813 (OMIM: 189908) transcription factor 7 is ( 269) 1862 229.5 7.2e-60
NP_963963 (OMIM: 189908) transcription factor 7 is ( 269) 1862 229.5 7.2e-60
NP_963965 (OMIM: 189908) transcription factor 7 is ( 268) 1685 208.9 1.2e-53
NP_001128323 (OMIM: 189908) transcription factor 7 ( 269) 1685 208.9 1.2e-53
XP_006714749 (OMIM: 189908) PREDICTED: transcripti ( 314) 1685 208.9 1.3e-53
XP_011541914 (OMIM: 189908) PREDICTED: transcripti ( 244) 1628 202.2 1.1e-51
XP_006714745 (OMIM: 189908) PREDICTED: transcripti ( 396) 1509 188.5 2.4e-47
XP_011541908 (OMIM: 189908) PREDICTED: transcripti ( 402) 1509 188.5 2.4e-47
XP_006714743 (OMIM: 189908) PREDICTED: transcripti ( 415) 1509 188.5 2.4e-47
NP_001333354 (OMIM: 189908) transcription factor 7 ( 415) 1509 188.5 2.4e-47
XP_011541906 (OMIM: 189908) PREDICTED: transcripti ( 416) 1509 188.5 2.4e-47
XP_006714741 (OMIM: 189908) PREDICTED: transcripti ( 460) 1509 188.5 2.6e-47
XP_011541911 (OMIM: 189908) PREDICTED: transcripti ( 289) 1451 181.6 2e-45
XP_016865279 (OMIM: 189908) PREDICTED: transcripti ( 213) 1157 147.2 3.4e-35
NP_001124186 (OMIM: 153245) lymphoid enhancer-bind ( 386) 1117 142.8 1.3e-33
XP_011541915 (OMIM: 189908) PREDICTED: transcripti ( 227) 1057 135.6 1.2e-31
NP_001124185 (OMIM: 153245) lymphoid enhancer-bind ( 371) 1042 134.0 5.6e-31
NP_001333379 (OMIM: 189908) transcription factor 7 ( 281) 1009 130.0 6.6e-30
XP_016865278 (OMIM: 189908) PREDICTED: transcripti ( 281) 1009 130.0 6.6e-30
XP_011541910 (OMIM: 189908) PREDICTED: transcripti ( 320) 1009 130.1 7.2e-30
XP_011541909 (OMIM: 189908) PREDICTED: transcripti ( 341) 1009 130.1 7.6e-30
XP_006714748 (OMIM: 189908) PREDICTED: transcripti ( 345) 1009 130.1 7.6e-30
XP_006714750 (OMIM: 189908) PREDICTED: transcripti ( 258) 980 126.6 6.4e-29
XP_011541913 (OMIM: 189908) PREDICTED: transcripti ( 258) 980 126.6 6.4e-29
XP_011541912 (OMIM: 189908) PREDICTED: transcripti ( 258) 980 126.6 6.4e-29
XP_005263105 (OMIM: 153245) PREDICTED: lymphoid en ( 318) 932 121.1 3.6e-27
NP_001159591 (OMIM: 153245) lymphoid enhancer-bind ( 303) 857 112.3 1.5e-24
XP_005263104 (OMIM: 153245) PREDICTED: lymphoid en ( 346) 802 106.0 1.4e-22
XP_006714296 (OMIM: 153245) PREDICTED: lymphoid en ( 299) 800 105.7 1.5e-22
XP_005263103 (OMIM: 153245) PREDICTED: lymphoid en ( 414) 802 106.0 1.6e-22
NP_001139758 (OMIM: 125853,602228) transcription f ( 442) 768 102.1 2.7e-21
NP_001185460 (OMIM: 125853,602228) transcription f ( 465) 768 102.1 2.8e-21
NP_001185459 (OMIM: 125853,602228) transcription f ( 408) 766 101.8 2.9e-21
XP_005270161 (OMIM: 125853,602228) PREDICTED: tran ( 438) 766 101.9 3.1e-21
XP_005270159 (OMIM: 125853,602228) PREDICTED: tran ( 461) 766 101.9 3.2e-21
NP_001139755 (OMIM: 125853,602228) transcription f ( 489) 766 101.9 3.4e-21
XP_016872084 (OMIM: 125853,602228) PREDICTED: tran ( 513) 766 101.9 3.5e-21
XP_005270160 (OMIM: 125853,602228) PREDICTED: tran ( 447) 763 101.5 4e-21
XP_005270157 (OMIM: 125853,602228) PREDICTED: tran ( 470) 763 101.5 4.2e-21
XP_005270152 (OMIM: 125853,602228) PREDICTED: tran ( 518) 761 101.3 5.3e-21
NP_057353 (OMIM: 153245) lymphoid enhancer-binding ( 399) 727 97.3 6.8e-20
XP_016872078 (OMIM: 125853,602228) PREDICTED: tran ( 631) 709 95.4 4.1e-19
NP_001185458 (OMIM: 125853,602228) transcription f ( 459) 701 94.3 6.2e-19
NP_001185457 (OMIM: 125853,602228) transcription f ( 459) 701 94.3 6.2e-19
XP_005270153 (OMIM: 125853,602228) PREDICTED: tran ( 482) 701 94.3 6.4e-19
NP_001185455 (OMIM: 125853,602228) transcription f ( 579) 702 94.5 6.7e-19
NP_001139746 (OMIM: 125853,602228) transcription f ( 602) 702 94.5 6.9e-19
>>NP_003193 (OMIM: 189908) transcription factor 7 isofor (384 aa)
initn: 2640 init1: 2640 opt: 2640 Z-score: 1684.2 bits: 320.4 E(85289): 4.5e-87
Smith-Waterman score: 2640; 100.0% identity (100.0% similar) in 384 aa overlap (1-384:1-384)
10 20 30 40 50 60
pF1KB5 MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPERDLAELKSSLVNESE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPERDLAELKSSLVNESE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAIN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 QILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGG
310 320 330 340 350 360
370 380
pF1KB5 KRNAFGTYPEKAAAPAPFLPMTVL
::::::::::::::::::::::::
NP_003 KRNAFGTYPEKAAAPAPFLPMTVL
370 380
>>XP_006714747 (OMIM: 189908) PREDICTED: transcription f (365 aa)
initn: 2463 init1: 2463 opt: 2463 Z-score: 1572.9 bits: 299.7 E(85289): 7.1e-81
Smith-Waterman score: 2463; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB5 MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPERDLAELKSSLVNESE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPERDLAELKSSLVNESE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAIN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 QILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTDN
310 320 330 340 350 360
370 380
pF1KB5 KRNAFGTYPEKAAAPAPFLPMTVL
XP_006 SLHYS
>>XP_006714742 (OMIM: 189908) PREDICTED: transcription f (429 aa)
initn: 2463 init1: 2463 opt: 2463 Z-score: 1572.0 bits: 299.8 E(85289): 8e-81
Smith-Waterman score: 2463; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB5 MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPERDLAELKSSLVNESE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPERDLAELKSSLVNESE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAIN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 QILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTDP
310 320 330 340 350 360
370 380
pF1KB5 KRNAFGTYPEKAAAPAPFLPMTVL
XP_006 GSPKKCRARFGLNQQTDWCGPCRWVCPHHRSPFALSCFPDSAHVPLGLQPTPLAPQPTSI
370 380 390 400 410 420
>>NP_998813 (OMIM: 189908) transcription factor 7 isofor (269 aa)
initn: 1862 init1: 1862 opt: 1862 Z-score: 1195.9 bits: 229.5 E(85289): 7.2e-60
Smith-Waterman score: 1862; 100.0% identity (100.0% similar) in 269 aa overlap (116-384:1-269)
90 100 110 120 130 140
pF1KB5 GREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKETVYSAFNLLMHYPPPSGAGQHPQPQP
::::::::::::::::::::::::::::::
NP_998 MYKETVYSAFNLLMHYPPPSGAGQHPQPQP
10 20 30
150 160 170 180 190 200
pF1KB5 PLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 PLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQ
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB5 LPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 LPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAK
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB5 KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKE
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB5 RQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPMTVL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 RQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPMTVL
220 230 240 250 260
>>NP_963963 (OMIM: 189908) transcription factor 7 isofor (269 aa)
initn: 1862 init1: 1862 opt: 1862 Z-score: 1195.9 bits: 229.5 E(85289): 7.2e-60
Smith-Waterman score: 1862; 100.0% identity (100.0% similar) in 269 aa overlap (116-384:1-269)
90 100 110 120 130 140
pF1KB5 GREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKETVYSAFNLLMHYPPPSGAGQHPQPQP
::::::::::::::::::::::::::::::
NP_963 MYKETVYSAFNLLMHYPPPSGAGQHPQPQP
10 20 30
150 160 170 180 190 200
pF1KB5 PLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 PLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQ
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB5 LPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 LPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAK
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB5 KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKE
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB5 RQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPMTVL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 RQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPMTVL
220 230 240 250 260
>>NP_963965 (OMIM: 189908) transcription factor 7 isofor (268 aa)
initn: 1685 init1: 1685 opt: 1685 Z-score: 1084.3 bits: 208.9 E(85289): 1.2e-53
Smith-Waterman score: 1685; 100.0% identity (100.0% similar) in 243 aa overlap (116-358:1-243)
90 100 110 120 130 140
pF1KB5 GREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKETVYSAFNLLMHYPPPSGAGQHPQPQP
::::::::::::::::::::::::::::::
NP_963 MYKETVYSAFNLLMHYPPPSGAGQHPQPQP
10 20 30
150 160 170 180 190 200
pF1KB5 PLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 PLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQ
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB5 LPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 LPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAK
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB5 KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKE
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB5 RQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPMTVL
:::::::::::::::::::::::::::::::::
NP_963 RQLHMQLYPGWSARDNYGKKKRRSREKHQESTTDPGSPKKCRARFGLNQQTDWCGPCR
220 230 240 250 260
>>NP_001128323 (OMIM: 189908) transcription factor 7 iso (269 aa)
initn: 1685 init1: 1685 opt: 1685 Z-score: 1084.3 bits: 208.9 E(85289): 1.2e-53
Smith-Waterman score: 1685; 100.0% identity (100.0% similar) in 243 aa overlap (116-358:1-243)
90 100 110 120 130 140
pF1KB5 GREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKETVYSAFNLLMHYPPPSGAGQHPQPQP
::::::::::::::::::::::::::::::
NP_001 MYKETVYSAFNLLMHYPPPSGAGQHPQPQP
10 20 30
150 160 170 180 190 200
pF1KB5 PLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQ
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB5 LPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAK
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB5 KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKE
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB5 RQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPMTVL
:::::::::::::::::::::::::::::::::
NP_001 RQLHMQLYPGWSARDNYGKKKRRSREKHQESTTETNWPRELKDGNGQESLSMSSSSSPA
220 230 240 250 260
>>XP_006714749 (OMIM: 189908) PREDICTED: transcription f (314 aa)
initn: 1685 init1: 1685 opt: 1685 Z-score: 1083.4 bits: 208.9 E(85289): 1.3e-53
Smith-Waterman score: 1685; 100.0% identity (100.0% similar) in 243 aa overlap (116-358:1-243)
90 100 110 120 130 140
pF1KB5 GREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKETVYSAFNLLMHYPPPSGAGQHPQPQP
::::::::::::::::::::::::::::::
XP_006 MYKETVYSAFNLLMHYPPPSGAGQHPQPQP
10 20 30
150 160 170 180 190 200
pF1KB5 PLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQ
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB5 LPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAK
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB5 KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKE
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB5 RQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPMTVL
:::::::::::::::::::::::::::::::::
XP_006 RQLHMQLYPGWSARDNYGKKKRRSREKHQESTTDPGSPKKCRARFGLNQQTDWCGPCRWV
220 230 240 250 260 270
XP_006 CPHHRSPFALSCFPDSAHVPLGLQPTPLAPQPTSILSRLGAQAS
280 290 300 310
>>XP_011541914 (OMIM: 189908) PREDICTED: transcription f (244 aa)
initn: 1628 init1: 1628 opt: 1628 Z-score: 1048.9 bits: 202.2 E(85289): 1.1e-51
Smith-Waterman score: 1628; 99.6% identity (100.0% similar) in 238 aa overlap (147-384:7-244)
120 130 140 150 160 170
pF1KB5 YKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPA
.:::::::::::::::::::::::::::::
XP_011 MQHVGIMHKANQPPHGVPQLSLYEHFNSPHPTPAPA
10 20 30
180 190 200 210 220 230
pF1KB5 DISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPAI
40 50 60 70 80 90
240 250 260 270 280 290
pF1KB5 VPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKES
100 110 120 130 140 150
300 310 320 330 340 350
pF1KB5 AAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQES
160 170 180 190 200 210
360 370 380
pF1KB5 TTGGKRNAFGTYPEKAAAPAPFLPMTVL
::::::::::::::::::::::::::::
XP_011 TTGGKRNAFGTYPEKAAAPAPFLPMTVL
220 230 240
>>XP_006714745 (OMIM: 189908) PREDICTED: transcription f (396 aa)
initn: 1489 init1: 1489 opt: 1509 Z-score: 971.1 bits: 188.5 E(85289): 2.4e-47
Smith-Waterman score: 2391; 92.0% identity (92.0% similar) in 389 aa overlap (1-358:1-389)
10 20 30 40 50 60
pF1KB5 MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPERDLAELKSSLVNESE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPERDLAELKSSLVNESE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQ
130 140 150 160 170 180
190 200 210
pF1KB5 KQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSW----------------------------
::::::::::::::::::::::::::::::::
XP_006 KQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWPSPPLYPLSPSCGYRQHFPAPTAAPGAP
190 200 210 220 230 240
220 230 240 250 260
pF1KB5 ---FTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YPRFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTI
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB5 KKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLH
310 320 330 340 350 360
330 340 350 360 370 380
pF1KB5 MQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPMTVL
:::::::::::::::::::::::::::::
XP_006 MQLYPGWSARDNYGKKKRRSREKHQESTTDNSLHYS
370 380 390
384 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 16:03:45 2016 done: Mon Nov 7 16:03:46 2016
Total Scan time: 9.360 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]