Result of FASTA (omim) for
pFN21AB5846
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5846, 485 aa
1>>>pF1KB5846 485 - 485 aa - 485 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6006+/-0.000488; mu= 13.0125+/- 0.030
mean_var=239.0226+/-49.187, 0's: 0 Z-trim(115.2): 2038 B-trim: 153 in 1/57
Lambda= 0.082957
statistics sampled from 23216 (25531) to 23216 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.299), width: 16
Scan time: 7.440
The best scores are: opt bits E(85289)
NP_003438 (OMIM: 600834) zinc finger protein 165 [ ( 485) 3323 411.7 2.4e-114
XP_016866748 (OMIM: 600834) PREDICTED: zinc finger ( 485) 3323 411.7 2.4e-114
XP_016866747 (OMIM: 600834) PREDICTED: zinc finger ( 485) 3323 411.7 2.4e-114
XP_016866749 (OMIM: 600834) PREDICTED: zinc finger ( 485) 3323 411.7 2.4e-114
XP_016866750 (OMIM: 600834) PREDICTED: zinc finger ( 311) 2082 262.9 9.6e-70
XP_016866751 (OMIM: 600834) PREDICTED: zinc finger ( 236) 1481 190.8 3.7e-48
XP_006716176 (OMIM: 601261) PREDICTED: zinc finger ( 473) 1090 144.4 6.6e-34
NP_666019 (OMIM: 601261) zinc finger and SCAN doma ( 473) 1090 144.4 6.6e-34
XP_016868073 (OMIM: 601261) PREDICTED: zinc finger ( 473) 1090 144.4 6.6e-34
XP_005250625 (OMIM: 601261) PREDICTED: zinc finger ( 473) 1090 144.4 6.6e-34
NP_061983 (OMIM: 611643) zinc finger protein with ( 545) 1003 134.1 9.7e-31
XP_005249152 (OMIM: 611643) PREDICTED: zinc finger ( 545) 1003 134.1 9.7e-31
XP_016867410 (OMIM: 611272) PREDICTED: zinc finger ( 838) 929 125.5 5.7e-28
XP_016867411 (OMIM: 611272) PREDICTED: zinc finger ( 838) 929 125.5 5.7e-28
XP_016867409 (OMIM: 611272) PREDICTED: zinc finger ( 838) 929 125.5 5.7e-28
XP_011529614 (OMIM: 300627) PREDICTED: zinc finger ( 518) 904 122.2 3.5e-27
NP_689908 (OMIM: 300627) zinc finger protein 449 [ ( 518) 904 122.2 3.5e-27
XP_011524533 (OMIM: 609601) PREDICTED: zinc finger ( 534) 799 109.7 2.1e-23
XP_016881531 (OMIM: 609601) PREDICTED: zinc finger ( 534) 799 109.7 2.1e-23
NP_001128650 (OMIM: 609601) zinc finger protein 39 ( 534) 799 109.7 2.1e-23
XP_011524531 (OMIM: 609601) PREDICTED: zinc finger ( 553) 799 109.7 2.2e-23
XP_011524532 (OMIM: 609601) PREDICTED: zinc finger ( 553) 799 109.7 2.2e-23
XP_006722621 (OMIM: 609601) PREDICTED: zinc finger ( 553) 799 109.7 2.2e-23
XP_006716174 (OMIM: 194510) PREDICTED: zinc finger ( 410) 785 107.8 5.9e-23
XP_016868071 (OMIM: 194510) PREDICTED: zinc finger ( 410) 785 107.8 5.9e-23
NP_001265220 (OMIM: 194510) zinc finger protein 3 ( 410) 785 107.8 5.9e-23
XP_016868072 (OMIM: 194510) PREDICTED: zinc finger ( 410) 785 107.8 5.9e-23
NP_001265221 (OMIM: 194510) zinc finger protein 3 ( 410) 785 107.8 5.9e-23
NP_001265213 (OMIM: 194510) zinc finger protein 3 ( 446) 785 107.9 6.2e-23
NP_001305064 (OMIM: 194510) zinc finger protein 3 ( 446) 785 107.9 6.2e-23
NP_001265219 (OMIM: 194510) zinc finger protein 3 ( 446) 785 107.9 6.2e-23
NP_116313 (OMIM: 194510) zinc finger protein 3 iso ( 446) 785 107.9 6.2e-23
NP_001265216 (OMIM: 194510) zinc finger protein 3 ( 446) 785 107.9 6.2e-23
NP_001305065 (OMIM: 194510) zinc finger protein 3 ( 453) 785 107.9 6.3e-23
NP_694563 (OMIM: 194480) zinc finger protein 3 hom ( 502) 785 107.9 6.6e-23
NP_612474 (OMIM: 165280) zinc finger protein GLI4 ( 376) 774 106.4 1.4e-22
XP_011513176 (OMIM: 602240) PREDICTED: zinc finger ( 391) 774 106.5 1.4e-22
NP_001265050 (OMIM: 602240) zinc finger protein wi ( 391) 774 106.5 1.4e-22
NP_001265051 (OMIM: 602240) zinc finger protein wi ( 391) 774 106.5 1.4e-22
XP_011513175 (OMIM: 602240) PREDICTED: zinc finger ( 391) 774 106.5 1.4e-22
NP_001265048 (OMIM: 602240) zinc finger protein wi ( 578) 774 106.7 1.8e-22
XP_016866755 (OMIM: 602240) PREDICTED: zinc finger ( 578) 774 106.7 1.8e-22
XP_011513172 (OMIM: 602240) PREDICTED: zinc finger ( 578) 774 106.7 1.8e-22
NP_006289 (OMIM: 602240) zinc finger protein with ( 578) 774 106.7 1.8e-22
NP_001276331 (OMIM: 604077) zinc finger protein 13 ( 616) 774 106.8 1.8e-22
XP_016882731 (OMIM: 604077) PREDICTED: zinc finger ( 621) 774 106.8 1.9e-22
XP_016882730 (OMIM: 604077) PREDICTED: zinc finger ( 628) 774 106.8 1.9e-22
XP_016882729 (OMIM: 604077) PREDICTED: zinc finger ( 658) 774 106.8 1.9e-22
NP_001276330 (OMIM: 604077) zinc finger protein 13 ( 658) 774 106.8 1.9e-22
XP_006723425 (OMIM: 604077) PREDICTED: zinc finger ( 670) 774 106.8 1.9e-22
>>NP_003438 (OMIM: 600834) zinc finger protein 165 [Homo (485 aa)
initn: 3323 init1: 3323 opt: 3323 Z-score: 2174.0 bits: 411.7 E(85289): 2.4e-114
Smith-Waterman score: 3323; 99.4% identity (99.6% similar) in 485 aa overlap (1-485:1-485)
10 20 30 40 50 60
pF1KB5 MATEPKKAAAQNSPEDEGLLIVKIGEEEFIHGQDTCLQRSELLKQELCRQLFRQFCYQDS
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
NP_003 MATEPKKAAAQNSPEDEGLLIVKIEEEEFIHGQDTCLQRSELLKQELCRQLFRQFCYQDS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEEA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALNVKLQPVETKAHFDSSEPQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALNVKLQPVETKAHFDSSEPQLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 WDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAGRVKRQWEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 WDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAGRVKRQWEKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKSCKHGTCDQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKSCKHGTCDQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 SKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAKHAAVFSGDKTHQCNECGKAFRHSSKLA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAKHAAVFSGDKTHQCNECGKAFRHSSKLA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 RHQRIQTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGRAFNLNSHLIRHQR
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGRAFNLNSHLIRHQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 IHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQSSNLSQHQRIHMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 IHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQSSNLSQHQRIHMR
430 440 450 460 470 480
pF1KB5 ENLLM
:::::
NP_003 ENLLM
>>XP_016866748 (OMIM: 600834) PREDICTED: zinc finger pro (485 aa)
initn: 3323 init1: 3323 opt: 3323 Z-score: 2174.0 bits: 411.7 E(85289): 2.4e-114
Smith-Waterman score: 3323; 99.4% identity (99.6% similar) in 485 aa overlap (1-485:1-485)
10 20 30 40 50 60
pF1KB5 MATEPKKAAAQNSPEDEGLLIVKIGEEEFIHGQDTCLQRSELLKQELCRQLFRQFCYQDS
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
XP_016 MATEPKKAAAQNSPEDEGLLIVKIEEEEFIHGQDTCLQRSELLKQELCRQLFRQFCYQDS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEEA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALNVKLQPVETKAHFDSSEPQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALNVKLQPVETKAHFDSSEPQLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 WDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAGRVKRQWEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAGRVKRQWEKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKSCKHGTCDQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKSCKHGTCDQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 SKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAKHAAVFSGDKTHQCNECGKAFRHSSKLA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAKHAAVFSGDKTHQCNECGKAFRHSSKLA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 RHQRIQTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGRAFNLNSHLIRHQR
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGRAFNLNSHLIRHQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 IHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQSSNLSQHQRIHMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQSSNLSQHQRIHMR
430 440 450 460 470 480
pF1KB5 ENLLM
:::::
XP_016 ENLLM
>>XP_016866747 (OMIM: 600834) PREDICTED: zinc finger pro (485 aa)
initn: 3323 init1: 3323 opt: 3323 Z-score: 2174.0 bits: 411.7 E(85289): 2.4e-114
Smith-Waterman score: 3323; 99.4% identity (99.6% similar) in 485 aa overlap (1-485:1-485)
10 20 30 40 50 60
pF1KB5 MATEPKKAAAQNSPEDEGLLIVKIGEEEFIHGQDTCLQRSELLKQELCRQLFRQFCYQDS
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
XP_016 MATEPKKAAAQNSPEDEGLLIVKIEEEEFIHGQDTCLQRSELLKQELCRQLFRQFCYQDS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEEA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALNVKLQPVETKAHFDSSEPQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALNVKLQPVETKAHFDSSEPQLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 WDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAGRVKRQWEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAGRVKRQWEKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKSCKHGTCDQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKSCKHGTCDQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 SKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAKHAAVFSGDKTHQCNECGKAFRHSSKLA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAKHAAVFSGDKTHQCNECGKAFRHSSKLA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 RHQRIQTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGRAFNLNSHLIRHQR
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGRAFNLNSHLIRHQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 IHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQSSNLSQHQRIHMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQSSNLSQHQRIHMR
430 440 450 460 470 480
pF1KB5 ENLLM
:::::
XP_016 ENLLM
>>XP_016866749 (OMIM: 600834) PREDICTED: zinc finger pro (485 aa)
initn: 3323 init1: 3323 opt: 3323 Z-score: 2174.0 bits: 411.7 E(85289): 2.4e-114
Smith-Waterman score: 3323; 99.4% identity (99.6% similar) in 485 aa overlap (1-485:1-485)
10 20 30 40 50 60
pF1KB5 MATEPKKAAAQNSPEDEGLLIVKIGEEEFIHGQDTCLQRSELLKQELCRQLFRQFCYQDS
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
XP_016 MATEPKKAAAQNSPEDEGLLIVKIEEEEFIHGQDTCLQRSELLKQELCRQLFRQFCYQDS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEEA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALNVKLQPVETKAHFDSSEPQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALNVKLQPVETKAHFDSSEPQLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 WDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAGRVKRQWEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAGRVKRQWEKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKSCKHGTCDQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKSCKHGTCDQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 SKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAKHAAVFSGDKTHQCNECGKAFRHSSKLA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAKHAAVFSGDKTHQCNECGKAFRHSSKLA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 RHQRIQTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGRAFNLNSHLIRHQR
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGRAFNLNSHLIRHQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 IHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQSSNLSQHQRIHMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQSSNLSQHQRIHMR
430 440 450 460 470 480
pF1KB5 ENLLM
:::::
XP_016 ENLLM
>>XP_016866750 (OMIM: 600834) PREDICTED: zinc finger pro (311 aa)
initn: 2082 init1: 2082 opt: 2082 Z-score: 1373.2 bits: 262.9 E(85289): 9.6e-70
Smith-Waterman score: 2082; 99.3% identity (99.7% similar) in 302 aa overlap (184-485:10-311)
160 170 180 190 200 210
pF1KB5 PPGPALNVKLQPVETKAHFDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRIS
::::::::::::::::::::::::::::::
XP_016 MNLPPQTSLDNESENSRSMPKLEIFEKIESQRIISGRIS
10 20 30
220 230 240 250 260 270
pF1KB5 GYISEASGESQDICKSAGRVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GYISEASGESQDICKSAGRVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHD
40 50 60 70 80 90
280 290 300 310 320 330
pF1KB5 GCERRLNLNSNEFTHQKSCKHGTCDQSSKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAK
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
XP_016 GCERRLNLNSNEFTHQKSCKHGTCDQSFKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAK
100 110 120 130 140 150
340 350 360 370 380 390
pF1KB5 HAAVFSGDKTHQCNECGKAFRHSSKLARHQRIQTGERCYECNECGKSFAESSDLTRHRRI
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
XP_016 HAAVFSGDKTHQCNECGKAFRHSSKLARHQRIHTGERCYECNECGKSFAESSDLTRHRRI
160 170 180 190 200 210
400 410 420 430 440 450
pF1KB5 HTGERPFGCKECGRAFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTGERPFGCKECGRAFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGE
220 230 240 250 260 270
460 470 480
pF1KB5 KPYECSECGRAFSQSSNLSQHQRIHMRENLLM
::::::::::::::::::::::::::::::::
XP_016 KPYECSECGRAFSQSSNLSQHQRIHMRENLLM
280 290 300 310
>>XP_016866751 (OMIM: 600834) PREDICTED: zinc finger pro (236 aa)
initn: 1506 init1: 1481 opt: 1481 Z-score: 985.6 bits: 190.8 E(85289): 3.7e-48
Smith-Waterman score: 1481; 99.1% identity (99.6% similar) in 223 aa overlap (1-223:1-223)
10 20 30 40 50 60
pF1KB5 MATEPKKAAAQNSPEDEGLLIVKIGEEEFIHGQDTCLQRSELLKQELCRQLFRQFCYQDS
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
XP_016 MATEPKKAAAQNSPEDEGLLIVKIEEEEFIHGQDTCLQRSELLKQELCRQLFRQFCYQDS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEEA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALNVKLQPVETKAHFDSSEPQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALNVKLQPVETKAHFDSSEPQLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 WDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAGRVKRQWEKE
:::::::::::::::::::::::::::::::::::::::::.:
XP_016 WDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGNSWKGHCQVLLNAGF
190 200 210 220 230
250 260 270 280 290 300
pF1KB5 SGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKSCKHGTCDQS
>>XP_006716176 (OMIM: 601261) PREDICTED: zinc finger and (473 aa)
initn: 2407 init1: 578 opt: 1090 Z-score: 729.7 bits: 144.4 E(85289): 6.6e-34
Smith-Waterman score: 1140; 41.2% identity (67.8% similar) in 478 aa overlap (14-481:17-469)
10 20 30 40 50
pF1KB5 MATEPKKAAAQNSPEDE-GLLIVKIGEEEFIHGQDTCLQRSELLKQ-ELCRQLFRQF
:... : :.::. :.: .... : . :. :: ::::
XP_006 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKE---------EKGKYLPSLEMFRQRFRQF
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 CYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPE
:.:.::::::::.:: :::.::.::::::::::::::::::::::: .:::::.:: ::
XP_006 GYHDTPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 SGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPAL----NVKLQPVETKAH
:.:::::.:::::: :: ::.. . :. .:.: : : ... ::.::. .
XP_006 SAEEAVTLLEDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAG
..: : . . .:.: ... :.. . ... . . .: ::: : . :: .
XP_006 YESWGPLYIQESGEEQEFAQDPRKVRDCRLSTQHEESADEQKG--SEAEGLKGDIISV--
180 190 200 210 220
240 250 260 270 280 290
pF1KB5 RVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKS
. . . : : : .. ...: : . .. .: : .. .. ..
XP_006 -IIANKPEASLERQCVNLENEKGTKPPLQEAGSKKG----------RESVPTKPTPGERR
230 240 250 260 270
300 310 320 330 340
pF1KB5 CKHGTCDQSSKWNSDFINHQIIYAGEKNH---QYGKSFK-SPKLAKHAAVFSGDKTHQCN
. : .. . .:.. .:. ..::: . . ::.:. : .:. : . :. ..:
XP_006 YICAECGKAFSNSSNLTKHRRTHTGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-
280 290 300 310 320 330
350 360 370 380 390 400
pF1KB5 ECGKAFRHSSKLARHQRIQTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGR
.::::: .:: : .:::..: : :.:..:::.:. ...: :: ::::::.:. :.:::.
XP_006 KCGKAFGQSSDLLKHQRMHTEEAPYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGK
340 350 360 370 380 390
410 420 430 440 450 460
pF1KB5 AFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQ
.:. .. : :::.:: ::::.:.::::.: ::.. .: ::::::::: : .::..: .
XP_006 SFSQHAGLSSHQRLHTGEKPYKCKECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCS
400 410 420 430 440 450
470 480
pF1KB5 SSNLSQHQRIHMRENLLM
.::::.:::.: :
XP_006 KSNLSKHQRVHTGEGEAP
460 470
>>NP_666019 (OMIM: 601261) zinc finger and SCAN domain-c (473 aa)
initn: 2407 init1: 578 opt: 1090 Z-score: 729.7 bits: 144.4 E(85289): 6.6e-34
Smith-Waterman score: 1140; 41.2% identity (67.8% similar) in 478 aa overlap (14-481:17-469)
10 20 30 40 50
pF1KB5 MATEPKKAAAQNSPEDE-GLLIVKIGEEEFIHGQDTCLQRSELLKQ-ELCRQLFRQF
:... : :.::. :.: .... : . :. :: ::::
NP_666 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKE---------EKGKYLPSLEMFRQRFRQF
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 CYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPE
:.:.::::::::.:: :::.::.::::::::::::::::::::::: .:::::.:: ::
NP_666 GYHDTPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 SGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPAL----NVKLQPVETKAH
:.:::::.:::::: :: ::.. . :. .:.: : : ... ::.::. .
NP_666 SAEEAVTLLEDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAG
..: : . . .:.: ... :.. . ... . . .: ::: : . :: .
NP_666 YESWGPLYIQESGEEQEFAQDPRKVRDCRLSTQHEESADEQKG--SEAEGLKGDIISV--
180 190 200 210 220
240 250 260 270 280 290
pF1KB5 RVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKS
. . . : : : .. ...: : . .. .: : .. .. ..
NP_666 -IIANKPEASLERQCVNLENEKGTKPPLQEAGSKKG----------RESVPTKPTPGERR
230 240 250 260 270
300 310 320 330 340
pF1KB5 CKHGTCDQSSKWNSDFINHQIIYAGEKNH---QYGKSFK-SPKLAKHAAVFSGDKTHQCN
. : .. . .:.. .:. ..::: . . ::.:. : .:. : . :. ..:
NP_666 YICAECGKAFSNSSNLTKHRRTHTGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-
280 290 300 310 320 330
350 360 370 380 390 400
pF1KB5 ECGKAFRHSSKLARHQRIQTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGR
.::::: .:: : .:::..: : :.:..:::.:. ...: :: ::::::.:. :.:::.
NP_666 KCGKAFGQSSDLLKHQRMHTEEAPYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGK
340 350 360 370 380 390
410 420 430 440 450 460
pF1KB5 AFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQ
.:. .. : :::.:: ::::.:.::::.: ::.. .: ::::::::: : .::..: .
NP_666 SFSQHAGLSSHQRLHTGEKPYKCKECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCS
400 410 420 430 440 450
470 480
pF1KB5 SSNLSQHQRIHMRENLLM
.::::.:::.: :
NP_666 KSNLSKHQRVHTGEGEAP
460 470
>>XP_016868073 (OMIM: 601261) PREDICTED: zinc finger and (473 aa)
initn: 2407 init1: 578 opt: 1090 Z-score: 729.7 bits: 144.4 E(85289): 6.6e-34
Smith-Waterman score: 1140; 41.2% identity (67.8% similar) in 478 aa overlap (14-481:17-469)
10 20 30 40 50
pF1KB5 MATEPKKAAAQNSPEDE-GLLIVKIGEEEFIHGQDTCLQRSELLKQ-ELCRQLFRQF
:... : :.::. :.: .... : . :. :: ::::
XP_016 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKE---------EKGKYLPSLEMFRQRFRQF
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 CYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPE
:.:.::::::::.:: :::.::.::::::::::::::::::::::: .:::::.:: ::
XP_016 GYHDTPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 SGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPAL----NVKLQPVETKAH
:.:::::.:::::: :: ::.. . :. .:.: : : ... ::.::. .
XP_016 SAEEAVTLLEDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAG
..: : . . .:.: ... :.. . ... . . .: ::: : . :: .
XP_016 YESWGPLYIQESGEEQEFAQDPRKVRDCRLSTQHEESADEQKG--SEAEGLKGDIISV--
180 190 200 210 220
240 250 260 270 280 290
pF1KB5 RVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKS
. . . : : : .. ...: : . .. .: : .. .. ..
XP_016 -IIANKPEASLERQCVNLENEKGTKPPLQEAGSKKG----------RESVPTKPTPGERR
230 240 250 260 270
300 310 320 330 340
pF1KB5 CKHGTCDQSSKWNSDFINHQIIYAGEKNH---QYGKSFK-SPKLAKHAAVFSGDKTHQCN
. : .. . .:.. .:. ..::: . . ::.:. : .:. : . :. ..:
XP_016 YICAECGKAFSNSSNLTKHRRTHTGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-
280 290 300 310 320 330
350 360 370 380 390 400
pF1KB5 ECGKAFRHSSKLARHQRIQTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGR
.::::: .:: : .:::..: : :.:..:::.:. ...: :: ::::::.:. :.:::.
XP_016 KCGKAFGQSSDLLKHQRMHTEEAPYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGK
340 350 360 370 380 390
410 420 430 440 450 460
pF1KB5 AFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQ
.:. .. : :::.:: ::::.:.::::.: ::.. .: ::::::::: : .::..: .
XP_016 SFSQHAGLSSHQRLHTGEKPYKCKECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCS
400 410 420 430 440 450
470 480
pF1KB5 SSNLSQHQRIHMRENLLM
.::::.:::.: :
XP_016 KSNLSKHQRVHTGEGEAP
460 470
>>XP_005250625 (OMIM: 601261) PREDICTED: zinc finger and (473 aa)
initn: 2407 init1: 578 opt: 1090 Z-score: 729.7 bits: 144.4 E(85289): 6.6e-34
Smith-Waterman score: 1140; 41.2% identity (67.8% similar) in 478 aa overlap (14-481:17-469)
10 20 30 40 50
pF1KB5 MATEPKKAAAQNSPEDE-GLLIVKIGEEEFIHGQDTCLQRSELLKQ-ELCRQLFRQF
:... : :.::. :.: .... : . :. :: ::::
XP_005 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKE---------EKGKYLPSLEMFRQRFRQF
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 CYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPE
:.:.::::::::.:: :::.::.::::::::::::::::::::::: .:::::.:: ::
XP_005 GYHDTPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 SGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPAL----NVKLQPVETKAH
:.:::::.:::::: :: ::.. . :. .:.: : : ... ::.::. .
XP_005 SAEEAVTLLEDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAG
..: : . . .:.: ... :.. . ... . . .: ::: : . :: .
XP_005 YESWGPLYIQESGEEQEFAQDPRKVRDCRLSTQHEESADEQKG--SEAEGLKGDIISV--
180 190 200 210 220
240 250 260 270 280 290
pF1KB5 RVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKS
. . . : : : .. ...: : . .. .: : .. .. ..
XP_005 -IIANKPEASLERQCVNLENEKGTKPPLQEAGSKKG----------RESVPTKPTPGERR
230 240 250 260 270
300 310 320 330 340
pF1KB5 CKHGTCDQSSKWNSDFINHQIIYAGEKNH---QYGKSFK-SPKLAKHAAVFSGDKTHQCN
. : .. . .:.. .:. ..::: . . ::.:. : .:. : . :. ..:
XP_005 YICAECGKAFSNSSNLTKHRRTHTGEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDC-
280 290 300 310 320 330
350 360 370 380 390 400
pF1KB5 ECGKAFRHSSKLARHQRIQTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGR
.::::: .:: : .:::..: : :.:..:::.:. ...: :: ::::::.:. :.:::.
XP_005 KCGKAFGQSSDLLKHQRMHTEEAPYQCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGK
340 350 360 370 380 390
410 420 430 440 450 460
pF1KB5 AFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQ
.:. .. : :::.:: ::::.:.::::.: ::.. .: ::::::::: : .::..: .
XP_005 SFSQHAGLSSHQRLHTGEKPYKCKECGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCS
400 410 420 430 440 450
470 480
pF1KB5 SSNLSQHQRIHMRENLLM
.::::.:::.: :
XP_005 KSNLSKHQRVHTGEGEAP
460 470
485 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 16:48:30 2016 done: Mon Nov 7 16:48:31 2016
Total Scan time: 7.440 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]