Result of FASTA (ccds) for
pFN21AB5784
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5784, 770 aa
1>>>pF1KB5784 770 - 770 aa - 770 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.8002+/-0.00102; mu= -8.8875+/- 0.061
mean_var=357.1605+/-75.295, 0's: 0 Z-trim(114.5): 35 B-trim: 399 in 1/52
Lambda= 0.067864
statistics sampled from 15073 (15100) to 15073 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.761), E-opt: 0.2 (0.464), width: 16
Scan time: 3.100
The best scores are: opt bits E(32554)
CCDS34149.1 DAB2 gene_id:1601|Hs108|chr5 ( 770) 5195 522.9 7.3e-148
CCDS58946.1 DAB2 gene_id:1601|Hs108|chr5 ( 749) 3703 376.9 6.7e-104
CCDS607.1 DAB1 gene_id:1600|Hs108|chr1 ( 555) 746 87.3 7.5e-17
>>CCDS34149.1 DAB2 gene_id:1601|Hs108|chr5 (770 aa)
initn: 5195 init1: 5195 opt: 5195 Z-score: 2768.1 bits: 522.9 E(32554): 7.3e-148
Smith-Waterman score: 5195; 100.0% identity (100.0% similar) in 770 aa overlap (1-770:1-770)
10 20 30 40 50 60
pF1KB5 MSNEVETSATNGQPDQQAAPKAPSKKEKKKGPEKTDEYLLARFKGDGVKYKAKLIGIDDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MSNEVETSATNGQPDQQAAPKAPSKKEKKKGPEKTDEYLLARFKGDGVKYKAKLIGIDDV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PDARGDKMSQDSMMKLKGMAAAGRSQGQHKQRIWVNISLSGIKIIDEKTGVIEHEHPVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 PDARGDKMSQDSMMKLKGMAAAGRSQGQHKQRIWVNISLSGIKIIDEKTGVIEHEHPVNK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 ISFIARDVTDNRAFGYVCGGEGQHQFFAIKTGQQAEPLVVDLKDLFQVIYNVKKKEEEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ISFIARDVTDNRAFGYVCGGEGQHQFFAIKTGQQAEPLVVDLKDLFQVIYNVKKKEEEKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KIEEASKAVENGSEALMILDDQTNKLKSGVDQMDLFGDMSTPPDLNSPTESKDILLVDLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 KIEEASKAVENGSEALMILDDQTNKLKSGVDQMDLFGDMSTPPDLNSPTESKDILLVDLN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SEIDTNQNSLRENPFLTNGITSCSLPRPTPQASFLPENAFSANLNFFPTPNPDPFRDDPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SEIDTNQNSLRENPFLTNGITSCSLPRPTPQASFLPENAFSANLNFFPTPNPDPFRDDPF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TQPDQSTPSSFDSLKSPDQKKENSSSSSTPLSNGPLNGDVDYFGQQFDQISNRTGKQEAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 TQPDQSTPSSFDSLKSPDQKKENSSSSSTPLSNGPLNGDVDYFGQQFDQISNRTGKQEAQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 AGPWPFSSSQTQPAVRTQNGVSEREQNGFSVKSSPNPFVGSPPKGLSIQNGVKQDLESSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 AGPWPFSSSQTQPAVRTQNGVSEREQNGFSVKSSPNPFVGSPPKGLSIQNGVKQDLESSV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 QSSPHDSIAIIPPPQSTKPGRGRRTAKSSANDLLASDIFAPPVSEPSGQASPTGQPTALQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QSSPHDSIAIIPPPQSTKPGRGRRTAKSSANDLLASDIFAPPVSEPSGQASPTGQPTALQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 PNPLDLFKTSAPAPVGPLVGLGGVTVTLPQAGPWNTASLVFNQSPSMAPGAMMGGQPSGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 PNPLDLFKTSAPAPVGPLVGLGGVTVTLPQAGPWNTASLVFNQSPSMAPGAMMGGQPSGF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 SQPVIFGTSPAVSGWNQPSPFAASTPPPVPVVWGPSASVAPNAWSTTSPLGNPFQSNIFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SQPVIFGTSPAVSGWNQPSPFAASTPPPVPVVWGPSASVAPNAWSTTSPLGNPFQSNIFP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 APAVSTQPPSMHSSLLVTPPQPPPRAGPPKDISSDAFTALDPLGDKEIKDVKEMFKDFQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 APAVSTQPPSMHSSLLVTPPQPPPRAGPPKDISSDAFTALDPLGDKEIKDVKEMFKDFQL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 RQPPAVPARKGEQTSSGTLSAFASYFNSKVGIPQENADHDDFDANQLLNKINEPPKPAPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RQPPAVPARKGEQTSSGTLSAFASYFNSKVGIPQENADHDDFDANQLLNKINEPPKPAPR
670 680 690 700 710 720
730 740 750 760 770
pF1KB5 QVSLPVTKSTDNAFENPFFKDSFGSSQASVASSQPVSSEMYRDPFGNPFA
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QVSLPVTKSTDNAFENPFFKDSFGSSQASVASSQPVSSEMYRDPFGNPFA
730 740 750 760 770
>>CCDS58946.1 DAB2 gene_id:1601|Hs108|chr5 (749 aa)
initn: 3697 init1: 3697 opt: 3703 Z-score: 1978.8 bits: 376.9 E(32554): 6.7e-104
Smith-Waterman score: 4994; 97.3% identity (97.3% similar) in 770 aa overlap (1-770:1-749)
10 20 30 40 50 60
pF1KB5 MSNEVETSATNGQPDQQAAPKAPSKKEKKKGPEKTDEYLLARFKGDGVKYKAKLIGIDDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MSNEVETSATNGQPDQQAAPKAPSKKEKKKGPEKTDEYLLARFKGDGVKYKAKLIGIDDV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PDARGDKMSQDSMMKLKGMAAAGRSQGQHKQRIWVNISLSGIKIIDEKTGVIEHEHPVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PDARGDKMSQDSMMKLKGMAAAGRSQGQHKQRIWVNISLSGIKIIDEKTGVIEHEHPVNK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 ISFIARDVTDNRAFGYVCGGEGQHQFFAIKTGQQAEPLVVDLKDLFQVIYNVKKKEEEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ISFIARDVTDNRAFGYVCGGEGQHQFFAIKTGQQAEPLVVDLKDLFQVIYNVKKKEEEKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KIEEASKAVENGSEALMILDDQTNKLKSGVDQMDLFGDMSTPPDLNSPTESKDILLVDLN
:::::::::::::::::::::::::::: :::::::::::
CCDS58 KIEEASKAVENGSEALMILDDQTNKLKS---------------------ESKDILLVDLN
190 200 210
250 260 270 280 290 300
pF1KB5 SEIDTNQNSLRENPFLTNGITSCSLPRPTPQASFLPENAFSANLNFFPTPNPDPFRDDPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SEIDTNQNSLRENPFLTNGITSCSLPRPTPQASFLPENAFSANLNFFPTPNPDPFRDDPF
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 TQPDQSTPSSFDSLKSPDQKKENSSSSSTPLSNGPLNGDVDYFGQQFDQISNRTGKQEAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TQPDQSTPSSFDSLKSPDQKKENSSSSSTPLSNGPLNGDVDYFGQQFDQISNRTGKQEAQ
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 AGPWPFSSSQTQPAVRTQNGVSEREQNGFSVKSSPNPFVGSPPKGLSIQNGVKQDLESSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AGPWPFSSSQTQPAVRTQNGVSEREQNGFSVKSSPNPFVGSPPKGLSIQNGVKQDLESSV
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB5 QSSPHDSIAIIPPPQSTKPGRGRRTAKSSANDLLASDIFAPPVSEPSGQASPTGQPTALQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QSSPHDSIAIIPPPQSTKPGRGRRTAKSSANDLLASDIFAPPVSEPSGQASPTGQPTALQ
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB5 PNPLDLFKTSAPAPVGPLVGLGGVTVTLPQAGPWNTASLVFNQSPSMAPGAMMGGQPSGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PNPLDLFKTSAPAPVGPLVGLGGVTVTLPQAGPWNTASLVFNQSPSMAPGAMMGGQPSGF
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB5 SQPVIFGTSPAVSGWNQPSPFAASTPPPVPVVWGPSASVAPNAWSTTSPLGNPFQSNIFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SQPVIFGTSPAVSGWNQPSPFAASTPPPVPVVWGPSASVAPNAWSTTSPLGNPFQSNIFP
520 530 540 550 560 570
610 620 630 640 650 660
pF1KB5 APAVSTQPPSMHSSLLVTPPQPPPRAGPPKDISSDAFTALDPLGDKEIKDVKEMFKDFQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 APAVSTQPPSMHSSLLVTPPQPPPRAGPPKDISSDAFTALDPLGDKEIKDVKEMFKDFQL
580 590 600 610 620 630
670 680 690 700 710 720
pF1KB5 RQPPAVPARKGEQTSSGTLSAFASYFNSKVGIPQENADHDDFDANQLLNKINEPPKPAPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RQPPAVPARKGEQTSSGTLSAFASYFNSKVGIPQENADHDDFDANQLLNKINEPPKPAPR
640 650 660 670 680 690
730 740 750 760 770
pF1KB5 QVSLPVTKSTDNAFENPFFKDSFGSSQASVASSQPVSSEMYRDPFGNPFA
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QVSLPVTKSTDNAFENPFFKDSFGSSQASVASSQPVSSEMYRDPFGNPFA
700 710 720 730 740
>>CCDS607.1 DAB1 gene_id:1600|Hs108|chr1 (555 aa)
initn: 1062 init1: 701 opt: 746 Z-score: 416.0 bits: 87.3 E(32554): 7.5e-17
Smith-Waterman score: 839; 32.9% identity (51.7% similar) in 773 aa overlap (13-768:4-540)
10 20 30 40 50
pF1KB5 MSNEVETSATNGQPDQQAAPKAPSKKE-KKKGPEKTDEYLLARFKGDGVKYKAKLIGIDD
. . :.: :. .::. .::: .... :. ::::.::.:::::::::.
CCDS60 MSTETELQVAVKTSAKKDSRKKGQDRSEATLIKRFKGEGVRYKAKLIGIDE
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 VPDARGDKMSQDSMMKLKGMAAAGRSQGQHKQRIWVNISLSGIKIIDEKTGVIEHEHPVN
: :::::. :::::::::..:..::.:.:::.:...::..::::.:::::...:.: :.
CCDS60 VSAARGDKLCQDSMMKLKGVVAGARSKGEHKQKIFLTISFGGIKIFDEKTGALQHHHAVH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 KISFIARDVTDNRAFGYVCGGEGQHQFFAIKTGQQAEPLVVDLKDLFQVIYNVKKKEEEK
.::.::.:.::.:::::::: ::.:.: ::::.: :::...::.::::.::..:..:: .
CCDS60 EISYIAKDITDHRAFGYVCGKEGNHRFVAIKTAQAAEPVILDLRDLFQLIYELKQREELE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 KKIEEASKAVENGSEALMILDDQTNKLKSGVDQMDLFGDMSTPPDLNSPTESKDILLVDL
:: .. : : .. .: : : :.
CCDS60 KKAQK---------------DKQCEQ---AVYQTILEEDV--------------------
180 190
240 250 260 270 280 290
pF1KB5 NSEIDTNQNSLRENPFLTNGITSCSLPRPTPQASFLPENAFSANLNFFPTPNPDPFRDDP
:.: . : :. .:.:: :
CCDS60 ------------EDPVYQYIV-------------------FEAG--------HEPIRD-P
200 210
300 310 320 330 340 350
pF1KB5 FTQPD-QSTPSSFDSLKSPDQKKENSSSSSTPLSNGPLNGDVDYFGQQFDQISNRTGKQE
:. . ..:.: :::: : :
CCDS60 ETEENIYQVPTS--------QKKE---------------GVYDV----------------
220 230
360 370 380 390 400 410
pF1KB5 AQAGPWPFSSSQTQPAVRTQNGVSEREQNGFSVKSSPNPFVGSPPKGLSIQNGVKQDLES
: ..::. ..:.. : :. :.: : . :::
CCDS60 ----P------KSQPV----SAVTQLEL--FGDMSTP-PDITSPP---------------
240 250 260
420 430 440 450 460 470
pF1KB5 SVQSSPHDSIAIIPPPQSTKPGRGRRTAKSSANDLLASDIFAPPVSEPSGQASPTGQPTA
. ..: : :.:: ..: :. ..:.:. : : :
CCDS60 -TPATPGD--AFIPSSSQTLPA--------------SADVFS---SVPFG----------
270 280 290
480 490 500 510 520 530
pF1KB5 LQPNPLDLFKTSAPAPVGPLVGLGGVTVTLPQAGPWNTASLVFNQSPSMAPGAMMGGQPS
.: .: : :..:.: ::. :. :.: . .::.::
CCDS60 -----------TAAVPSG-YVAMGAV---LPSF--WG-------QQPLVQQQMVMGAQPP
300 310 320
540 550 560 570 580 590
pF1KB5 GFSQPVIFGTSPAVSGWNQPSPFAASTPPPVPVVWGPSASVAPNAWSTTSPLGNPFQSNI
.: :. :..: . :.::. : : : : :.: : . : :. : :. .
CCDS60 -VAQ-VMPGAQPIA--WGQPGLFPA-TQQPWPTVAG---QFPPAAFM-------PTQT-V
330 340 350 360 370
600 610 620 630 640 650
pF1KB5 FPAPAVSTQPPSMHSSLLVTPPQPPPRAGPPKDISSDAFTALDPLGDKEIKDV-KEMFKD
.: ::. : : .:: : : .::. : .: :: . . :: :::
CCDS60 MPLPAAMFQGP-------LTPLATVP--G-----TSDS-TRSSPQTDKPRQKMGKETFKD
380 390 400 410
660 670 680 690 700 710
pF1KB5 FQLRQPPAVPARKGEQTS-SGTLSAFASYFNSKVGIPQENADHDDFDANQL-LNKI----
::. ::: ::.:: .: : . : ::.:::: :::. :.. : :::: .:: :. .
CCDS60 FQMAQPPPVPSRKPDQPSLTCTSEAFSSYFN-KVGVAQDTDDCDDFDISQLNLTPVTSTT
420 430 440 450 460 470
720 730 740 750 760
pF1KB5 ---NEPPKPAPRQVSLPVTKSTDNAFE---NPFFKDSFGSSQASVASSQPVSSEMYR--D
: :: ::::: : : .:...: . . .:...: : . : . : .:. :
CCDS60 PSTNSPPTPAPRQSS-PSKSSASHASDPTTDDIFEEGFESPSKSEEQEAPDGSQASSNSD
480 490 500 510 520 530
770
pF1KB5 PFGNPFA
:::.:
CCDS60 PFGEPSGEPSGDNISPQAGS
540 550
770 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:33:30 2016 done: Mon Nov 7 02:33:31 2016
Total Scan time: 3.100 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]