Result of FASTA (ccds) for
pFN21AB5781
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5781, 826 aa
1>>>pF1KB5781 826 - 826 aa - 826 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7065+/-0.00124; mu= 12.9045+/- 0.073
mean_var=103.4893+/-21.588, 0's: 0 Z-trim(103.2): 64 B-trim: 0 in 0/48
Lambda= 0.126074
statistics sampled from 7238 (7282) to 7238 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.577), E-opt: 0.2 (0.224), width: 16
Scan time: 2.880
The best scores are: opt bits E(32554)
CCDS11918.1 ELP2 gene_id:55250|Hs108|chr18 ( 826) 5734 1054.8 0
CCDS56065.1 ELP2 gene_id:55250|Hs108|chr18 ( 891) 4551 839.6 0
CCDS56067.1 ELP2 gene_id:55250|Hs108|chr18 ( 800) 4538 837.2 0
CCDS56069.1 ELP2 gene_id:55250|Hs108|chr18 ( 756) 4208 777.2 0
CCDS56066.1 ELP2 gene_id:55250|Hs108|chr18 ( 821) 4094 756.5 4.2e-218
CCDS56068.1 ELP2 gene_id:55250|Hs108|chr18 ( 756) 3136 582.2 1.1e-165
>>CCDS11918.1 ELP2 gene_id:55250|Hs108|chr18 (826 aa)
initn: 5734 init1: 5734 opt: 5734 Z-score: 5641.2 bits: 1054.8 E(32554): 0
Smith-Waterman score: 5734; 100.0% identity (100.0% similar) in 826 aa overlap (1-826:1-826)
10 20 30 40 50 60
pF1KB5 MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TSDPALCTLIVSAAADSAVRLWSKKGPEVMCLQTLNFGNGFALALCLSFLPNTDVPILAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TSDPALCTLIVSAAADSAVRLWSKKGPEVMCLQTLNFGNGFALALCLSFLPNTDVPILAC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 FHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 KDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 SLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 ILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 TTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFAF
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 TNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB5 GAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTL
730 740 750 760 770 780
790 800 810 820
pF1KB5 AIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL
::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 AIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL
790 800 810 820
>>CCDS56065.1 ELP2 gene_id:55250|Hs108|chr18 (891 aa)
initn: 4535 init1: 4535 opt: 4551 Z-score: 4477.8 bits: 839.6 E(32554): 0
Smith-Waterman score: 5358; 92.4% identity (92.4% similar) in 858 aa overlap (34-826:34-891)
10 20 30 40 50 60
pF1KB5 PVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTARVNC
::::::::::::::::::::::::::::::
CCDS56 PVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTARVNC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 IQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRRTSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 IQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRRTSD
70 80 90 100 110 120
130 140 150 160 170
pF1KB5 PALCTLIVSAAADSAVRLWSKKGPEVMCLQTLNFGNGFALALCLSFLPNTDV--------
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PALCTLIVSAAADSAVRLWSKKGPEVMCLQTLNFGNGFALALCLSFLPNTDVTWKTGQVE
130 140 150 160 170 180
pF1KB5 ---------------------------------------------------------PIL
:::
CCDS56 RGRAWKPPASLALCSRSCDSMVSCYASILCKALWKEKLHTFWHHNRISFLPSAFRPIPIL
190 200 210 220 230 240
180 190 200 210 220 230
pF1KB5 ACGNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ACGNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKL
250 260 270 280 290 300
240 250 260 270 280 290
pF1KB5 YIKSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 YIKSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKD
310 320 330 340 350 360
300 310 320 330 340 350
pF1KB5 GVLQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GVLQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIA
370 380 390 400 410 420
360 370 380 390 400 410
pF1KB5 HAFHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 HAFHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPW
430 440 450 460 470 480
420 430 440 450 460 470
pF1KB5 KRKDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KRKDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAIT
490 500 510 520 530 540
480 490 500 510 520 530
pF1KB5 GQSLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GQSLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQ
550 560 570 580 590 600
540 550 560 570 580 590
pF1KB5 PSILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PSILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIIL
610 620 630 640 650 660
600 610 620 630 640 650
pF1KB5 WNTTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 WNTTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLF
670 680 690 700 710 720
660 670 680 690 700 710
pF1KB5 AFTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AFTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLD
730 740 750 760 770 780
720 730 740 750 760 770
pF1KB5 VGGAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VGGAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSH
790 800 810 820 830 840
780 790 800 810 820
pF1KB5 TLAIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TLAIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL
850 860 870 880 890
>>CCDS56067.1 ELP2 gene_id:55250|Hs108|chr18 (800 aa)
initn: 4538 init1: 4538 opt: 4538 Z-score: 4465.8 bits: 837.2 E(32554): 0
Smith-Waterman score: 5493; 96.9% identity (96.9% similar) in 826 aa overlap (1-826:1-800)
10 20 30 40 50 60
pF1KB5 MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TSDPALCTLIVSAAADSAVRLWSKKGPEVMCLQTLNFGNGFALALCLSFLPNTDVPILAC
::::::::::::::::::::::::::::: :::::
CCDS56 TSDPALCTLIVSAAADSAVRLWSKKGPEV--------------------------PILAC
130 140 150
190 200 210 220 230 240
pF1KB5 GNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYI
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 KSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGV
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 LQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 FHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKR
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB5 KDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQ
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB5 SLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPS
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB5 ILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWN
520 530 540 550 560 570
610 620 630 640 650 660
pF1KB5 TTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFAF
580 590 600 610 620 630
670 680 690 700 710 720
pF1KB5 TNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVG
640 650 660 670 680 690
730 740 750 760 770 780
pF1KB5 GAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTL
700 710 720 730 740 750
790 800 810 820
pF1KB5 AIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL
::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL
760 770 780 790 800
>>CCDS56069.1 ELP2 gene_id:55250|Hs108|chr18 (756 aa)
initn: 5213 init1: 4208 opt: 4208 Z-score: 4141.7 bits: 777.2 E(32554): 0
Smith-Waterman score: 5077; 91.5% identity (91.5% similar) in 826 aa overlap (1-826:1-756)
10 20 30 40 50 60
pF1KB5 MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TSDPALCTLIVSAAADSAVRLWSKKGPEVMCLQTLNFGNGFALALCLSFLPNTDVPILAC
::::::::::::::::::::::::::::
CCDS56 TSDPALCTLIVSAAADSAVRLWSKKGPE--------------------------------
130 140
190 200 210 220 230 240
pF1KB5 GNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYI
::::::::::::::::::::::
CCDS56 --------------------------------------GRDLFLASCSQDCLIRIWKLYI
150 160 170
250 260 270 280 290 300
pF1KB5 KSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGV
180 190 200 210 220 230
310 320 330 340 350 360
pF1KB5 LQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHA
240 250 260 270 280 290
370 380 390 400 410 420
pF1KB5 FHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKR
300 310 320 330 340 350
430 440 450 460 470 480
pF1KB5 KDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQ
360 370 380 390 400 410
490 500 510 520 530 540
pF1KB5 SLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPS
420 430 440 450 460 470
550 560 570 580 590 600
pF1KB5 ILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWN
480 490 500 510 520 530
610 620 630 640 650 660
pF1KB5 TTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFAF
540 550 560 570 580 590
670 680 690 700 710 720
pF1KB5 TNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVG
600 610 620 630 640 650
730 740 750 760 770 780
pF1KB5 GAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTL
660 670 680 690 700 710
790 800 810 820
pF1KB5 AIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL
::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL
720 730 740 750
>>CCDS56066.1 ELP2 gene_id:55250|Hs108|chr18 (821 aa)
initn: 5218 init1: 3136 opt: 4094 Z-score: 4029.1 bits: 756.5 E(32554): 4.2e-218
Smith-Waterman score: 5093; 88.3% identity (89.6% similar) in 865 aa overlap (1-826:1-821)
10 20 30 40 50 60
pF1KB5 MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRR
70 80 90 100 110 120
130 140 150
pF1KB5 TSDPALCTLIVSAAADSAVRLWSKKGPEV--------------------MCLQTLN-FGN
::::::::::::::::::::::::::::: .: .. . . .
CCDS56 TSDPALCTLIVSAAADSAVRLWSKKGPEVTWKTGQVERGRAWKPPASLALCSRSCDSMVS
130 140 150 160 170 180
160 170 180 190 200
pF1KB5 GFALALC----------------LSFLPNT--DVPILACGNDDCRIHIFAQQNDQFQKVL
.: :: .::::.. .::::::::::::::::::::::::::
CCDS56 CYASILCKALWKEKLHTFWHHNRISFLPSAFRPIPILACGNDDCRIHIFAQQNDQFQKVL
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB5 SLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYIKSTSLETQDDDNIRLKENTFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYIKSTSLETQDDDNIRLKENTFT
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB5 IENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGVLQQPVRLLSASMDKTMILWAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 IENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGVLQQPVRLLSASMDKTMILWAP
310 320 330 340 350 360
330 340 350 360 370 380
pF1KB5 DEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHAFHGALHLWKQNTVNPREWTPE
:::::::::: ::::::
CCDS56 DEESGVWLEQ--------------------------------------------REWTPE
370
390 400 410 420 430 440
pF1KB5 IVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 IVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDL
380 390 400 410 420 430
450 460 470 480 490 500
pF1KB5 KCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQSLNHVLCNQDSDLPEGATVPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQSLNHVLCNQDSDLPEGATVPA
440 450 460 470 480 490
510 520 530 540 550 560
pF1KB5 LGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQ
500 510 520 530 540 550
570 580 590 600 610 620
pF1KB5 KLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMA
560 570 580 590 600 610
630 640 650 660 670 680
pF1KB5 FSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFAFTNKITSVHSRIIWSCDWSPDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFAFTNKITSVHSRIIWSCDWSPDS
620 630 640 650 660 670
690 700 710 720 730 740
pF1KB5 KYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVGGAVTAVSVCPVLHPSQRYVVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVGGAVTAVSVCPVLHPSQRYVVA
680 690 700 710 720 730
750 760 770 780 790 800
pF1KB5 VGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTLAIRKLCWKNCSGKTEQKEAEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTLAIRKLCWKNCSGKTEQKEAEG
740 750 760 770 780 790
810 820
pF1KB5 AEWLHFASCGEDHTVKIHRVNKCAL
:::::::::::::::::::::::::
CCDS56 AEWLHFASCGEDHTVKIHRVNKCAL
800 810 820
>>CCDS56068.1 ELP2 gene_id:55250|Hs108|chr18 (756 aa)
initn: 4211 init1: 3136 opt: 3136 Z-score: 3088.0 bits: 582.2 E(32554): 1.1e-165
Smith-Waterman score: 5082; 91.5% identity (91.5% similar) in 826 aa overlap (1-826:1-756)
10 20 30 40 50 60
pF1KB5 MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TSDPALCTLIVSAAADSAVRLWSKKGPEVMCLQTLNFGNGFALALCLSFLPNTDVPILAC
::::::::::::::::::::::::::::: :::::
CCDS56 TSDPALCTLIVSAAADSAVRLWSKKGPEV--------------------------PILAC
130 140 150
190 200 210 220 230 240
pF1KB5 GNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYI
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 KSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGV
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 LQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHA
:::::::::::::::::::::::::::::::
CCDS56 LQQPVRLLSASMDKTMILWAPDEESGVWLEQ-----------------------------
280 290 300
370 380 390 400 410 420
pF1KB5 FHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKR
:::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ---------------REWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKR
310 320 330 340 350
430 440 450 460 470 480
pF1KB5 KDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQ
360 370 380 390 400 410
490 500 510 520 530 540
pF1KB5 SLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPS
420 430 440 450 460 470
550 560 570 580 590 600
pF1KB5 ILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWN
480 490 500 510 520 530
610 620 630 640 650 660
pF1KB5 TTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFAF
540 550 560 570 580 590
670 680 690 700 710 720
pF1KB5 TNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVG
600 610 620 630 640 650
730 740 750 760 770 780
pF1KB5 GAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTL
660 670 680 690 700 710
790 800 810 820
pF1KB5 AIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL
::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL
720 730 740 750
826 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:41:18 2016 done: Sun Nov 6 13:41:18 2016
Total Scan time: 2.880 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]