Result of FASTA (omim) for
pFN21AB5739
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5739, 789 aa
1>>>pF1KB5739 789 - 789 aa - 789 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2582+/-0.000468; mu= 15.0463+/- 0.029
mean_var=73.9604+/-15.214, 0's: 0 Z-trim(109.2): 26 B-trim: 290 in 2/53
Lambda= 0.149133
statistics sampled from 17367 (17375) to 17367 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.544), E-opt: 0.2 (0.204), width: 16
Scan time: 11.510
The best scores are: opt bits E(85289)
NP_955400 (OMIM: 608430) short transient receptor ( 789) 5141 1116.3 0
NP_056453 (OMIM: 608430) short transient receptor ( 797) 5115 1110.7 0
XP_016883288 (OMIM: 608430) PREDICTED: short trans ( 757) 4359 948.0 0
XP_011527074 (OMIM: 608430) PREDICTED: short trans ( 507) 3187 695.8 1.2e-199
XP_016883289 (OMIM: 608430) PREDICTED: short trans ( 459) 2942 643.1 8e-184
XP_011527076 (OMIM: 608430) PREDICTED: short trans ( 399) 2577 564.5 3.1e-160
XP_016883290 (OMIM: 608430) PREDICTED: short trans ( 399) 2577 564.5 3.1e-160
>>NP_955400 (OMIM: 608430) short transient receptor pote (789 aa)
initn: 5141 init1: 5141 opt: 5141 Z-score: 5974.3 bits: 1116.3 E(85289): 0
Smith-Waterman score: 5141; 100.0% identity (100.0% similar) in 789 aa overlap (1-789:1-789)
10 20 30 40 50 60
pF1KB5 MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQGASEENGLPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQGASEENGLPH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 TSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLFDKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 TSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLFDKLI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 WRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 WRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAIS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 LKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 LKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 YADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 YADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 KFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYISQVPTQMSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 KFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYISQVPTQMSF
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 LFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 LFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNN
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB5 FHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYIEEPYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_955 FHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYIEEPYM
730 740 750 760 770 780
pF1KB5 DIDRDFTEE
:::::::::
NP_955 DIDRDFTEE
>>NP_056453 (OMIM: 608430) short transient receptor pote (797 aa)
initn: 2890 init1: 2890 opt: 5115 Z-score: 5944.0 bits: 1110.7 E(85289): 0
Smith-Waterman score: 5115; 99.0% identity (99.0% similar) in 797 aa overlap (1-789:1-797)
10 20 30 40 50 60
pF1KB5 MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQ--------GA
:::::::::::::::::::::::::::::::::::::::::::::::::: ::
NP_056 LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQASIVFPPPGA
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB5 SEENGLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SEENGLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB5 NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB5 LNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVE
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB5 SFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRF
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB5 NKYINTDAKFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 NKYINTDAKFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYIS
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB5 QVPTQMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QVPTQMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKK
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB5 YPGFLLNNFHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 YPGFLLNNFHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALV
730 740 750 760 770 780
780
pF1KB5 SYIEEPYMDIDRDFTEE
:::::::::::::::::
NP_056 SYIEEPYMDIDRDFTEE
790
>>XP_016883288 (OMIM: 608430) PREDICTED: short transient (757 aa)
initn: 2287 init1: 2252 opt: 4359 Z-score: 5065.3 bits: 948.0 E(85289): 0
Smith-Waterman score: 4359; 96.0% identity (97.6% similar) in 707 aa overlap (1-699:1-704)
10 20 30 40 50 60
pF1KB5 MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQ--------GA
:::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_016 LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQASIVFPPPGA
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB5 SEENGLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEENGLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB5 NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB5 LNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVE
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB5 SFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRF
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB5 NKYINTDAKFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKYINTDAKFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYIS
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB5 QVPTQMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKK
:::::::::::::::::::::::. :.. . ..: . :... :.
XP_016 QVPTQMSFLFRLINIIHVQTLTQK---CVSGDPALLRTVLRRNQCPIVQTGPKEGGLASA
670 680 690 700 710
720 730 740 750 760 770
pF1KB5 YPGFLLNNFHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALV
XP_016 LRSQADLQASALPASPMSTSLTPSALLGFGIGPEAAQLPH
720 730 740 750
>>XP_011527074 (OMIM: 608430) PREDICTED: short transient (507 aa)
initn: 3200 init1: 2252 opt: 3187 Z-score: 3705.4 bits: 695.8 E(85289): 1.2e-199
Smith-Waterman score: 3187; 98.4% identity (98.4% similar) in 504 aa overlap (1-496:1-504)
10 20 30 40 50 60
pF1KB5 MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQ--------GA
:::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_011 LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQASIVFPPPGA
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB5 SEENGLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SEENGLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB5 NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB5 LNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVE
::::::::::::::::::::::::
XP_011 LNELSAISLKANIPEVEAVLNTDRLGS
490 500
>>XP_016883289 (OMIM: 608430) PREDICTED: short transient (459 aa)
initn: 2955 init1: 2890 opt: 2942 Z-score: 3421.2 bits: 643.1 E(85289): 8e-184
Smith-Waterman score: 2942; 98.3% identity (98.3% similar) in 459 aa overlap (339-789:1-459)
310 320 330 340 350 360
pF1KB5 VSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQ--------GASEENGLPH
:::::::::::: ::::::::::
XP_016 MRVANEESEHNQASIVFPPPGASEENGLPH
10 20 30
370 380 390 400 410 420
pF1KB5 TSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLFDKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLFDKLI
40 50 60 70 80 90
430 440 450 460 470 480
pF1KB5 WRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAIS
100 110 120 130 140 150
490 500 510 520 530 540
pF1KB5 LKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTS
160 170 180 190 200 210
550 560 570 580 590 600
pF1KB5 YADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDA
220 230 240 250 260 270
610 620 630 640 650 660
pF1KB5 KFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYISQVPTQMSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYISQVPTQMSF
280 290 300 310 320 330
670 680 690 700 710 720
pF1KB5 LFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNN
340 350 360 370 380 390
730 740 750 760 770 780
pF1KB5 FHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYIEEPYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYIEEPYM
400 410 420 430 440 450
pF1KB5 DIDRDFTEE
:::::::::
XP_016 DIDRDFTEE
>>XP_011527076 (OMIM: 608430) PREDICTED: short transient (399 aa)
initn: 2577 init1: 2577 opt: 2577 Z-score: 2997.8 bits: 564.5 E(85289): 3.1e-160
Smith-Waterman score: 2577; 99.7% identity (100.0% similar) in 392 aa overlap (398-789:8-399)
370 380 390 400 410 420
pF1KB5 PQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLFDKLIWRKHSAS
.:::::::::::::::::::::::::::::
XP_011 MRSQSTIKVHRMIAEFKLIPGLNNLFDKLIWRKHSAS
10 20 30
430 440 450 460 470 480
pF1KB5 ALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAISLKANIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAISLKANIPE
40 50 60 70 80 90
490 500 510 520 530 540
pF1KB5 VEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTSYADQMFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTSYADQMFL
100 110 120 130 140 150
550 560 570 580 590 600
pF1KB5 LKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDAKFQVFLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDAKFQVFLK
160 170 180 190 200 210
610 620 630 640 650 660
pF1KB5 QINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYISQVPTQMSFLFRLINI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYISQVPTQMSFLFRLINI
220 230 240 250 260 270
670 680 690 700 710 720
pF1KB5 IHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNNFHNLLRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNNFHNLLRF
280 290 300 310 320 330
730 740 750 760 770 780
pF1KB5 WQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYIEEPYMDIDRDFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYIEEPYMDIDRDFT
340 350 360 370 380 390
pF1KB5 EE
::
XP_011 EE
>>XP_016883290 (OMIM: 608430) PREDICTED: short transient (399 aa)
initn: 2577 init1: 2577 opt: 2577 Z-score: 2997.8 bits: 564.5 E(85289): 3.1e-160
Smith-Waterman score: 2577; 99.7% identity (100.0% similar) in 392 aa overlap (398-789:8-399)
370 380 390 400 410 420
pF1KB5 PQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLFDKLIWRKHSAS
.:::::::::::::::::::::::::::::
XP_016 MRSQSTIKVHRMIAEFKLIPGLNNLFDKLIWRKHSAS
10 20 30
430 440 450 460 470 480
pF1KB5 ALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAISLKANIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAISLKANIPE
40 50 60 70 80 90
490 500 510 520 530 540
pF1KB5 VEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTSYADQMFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTSYADQMFL
100 110 120 130 140 150
550 560 570 580 590 600
pF1KB5 LKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDAKFQVFLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDAKFQVFLK
160 170 180 190 200 210
610 620 630 640 650 660
pF1KB5 QINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYISQVPTQMSFLFRLINI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYISQVPTQMSFLFRLINI
220 230 240 250 260 270
670 680 690 700 710 720
pF1KB5 IHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNNFHNLLRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNNFHNLLRF
280 290 300 310 320 330
730 740 750 760 770 780
pF1KB5 WQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYIEEPYMDIDRDFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYIEEPYMDIDRDFT
340 350 360 370 380 390
pF1KB5 EE
::
XP_016 EE
789 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:05:50 2016 done: Sun Nov 6 21:05:51 2016
Total Scan time: 11.510 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]