Result of FASTA (omim) for
pFN21AB0444
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0444, 905 aa
1>>>pF1KB0444 905 - 905 aa - 905 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.7628+/-0.000495; mu= 10.2238+/- 0.031
mean_var=163.4193+/-33.444, 0's: 0 Z-trim(112.8): 59 B-trim: 4 in 1/52
Lambda= 0.100328
statistics sampled from 21806 (21851) to 21806 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.599), E-opt: 0.2 (0.256), width: 16
Scan time: 13.250
The best scores are: opt bits E(85289)
XP_006717336 (OMIM: 600777) PREDICTED: transcripti ( 905) 5900 867.3 0
NP_031370 (OMIM: 600777) transcription termination ( 905) 5900 867.3 0
XP_016870594 (OMIM: 600777) PREDICTED: transcripti ( 938) 5900 867.3 0
NP_001192225 (OMIM: 600777) transcription terminat ( 390) 2572 385.3 3.1e-106
XP_016868359 (OMIM: 608491) PREDICTED: cyclin-D-bi ( 667) 208 43.3 0.0047
NP_001135798 (OMIM: 608491) cyclin-D-binding Myb-l ( 672) 208 43.3 0.0047
XP_016868358 (OMIM: 608491) PREDICTED: cyclin-D-bi ( 701) 208 43.3 0.0049
XP_016868357 (OMIM: 608491) PREDICTED: cyclin-D-bi ( 708) 208 43.3 0.0049
XP_016868356 (OMIM: 608491) PREDICTED: cyclin-D-bi ( 719) 208 43.3 0.005
XP_011515041 (OMIM: 608491) PREDICTED: cyclin-D-bi ( 719) 208 43.3 0.005
XP_016868355 (OMIM: 608491) PREDICTED: cyclin-D-bi ( 719) 208 43.3 0.005
XP_016868354 (OMIM: 608491) PREDICTED: cyclin-D-bi ( 760) 208 43.4 0.0052
NP_001135799 (OMIM: 608491) cyclin-D-binding Myb-l ( 760) 208 43.4 0.0052
NP_066968 (OMIM: 608491) cyclin-D-binding Myb-like ( 760) 208 43.4 0.0052
XP_011515039 (OMIM: 608491) PREDICTED: cyclin-D-bi ( 760) 208 43.4 0.0052
XP_011515037 (OMIM: 608491) PREDICTED: cyclin-D-bi ( 760) 208 43.4 0.0052
>>XP_006717336 (OMIM: 600777) PREDICTED: transcription t (905 aa)
initn: 5900 init1: 5900 opt: 5900 Z-score: 4626.6 bits: 867.3 E(85289): 0
Smith-Waterman score: 5900; 100.0% identity (100.0% similar) in 905 aa overlap (1-905:1-905)
10 20 30 40 50 60
pF1KB0 MEGESSRFEIHTPVSDKKKKKCSIHKERPQKHSHEIFRDSSLVNEQSQITRRKKRKKDFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MEGESSRFEIHTPVSDKKKKKCSIHKERPQKHSHEIFRDSSLVNEQSQITRRKKRKKDFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 HLISSPLKKSRICDETANATSTLKKRKKRRYSALEVDEEAGVTVVLVDKENINNTPKHFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HLISSPLKKSRICDETANATSTLKKRKKRRYSALEVDEEAGVTVVLVDKENINNTPKHFR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 KDVDVVCVDMSIEQKLPRKPKTDKFQVLAKSHAHKSEALHSKVREKKNKKHQRKAASWES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KDVDVVCVDMSIEQKLPRKPKTDKFQVLAKSHAHKSEALHSKVREKKNKKHQRKAASWES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 QRARDTLPQSESHQEESWLSVGPGGEITELPASAHKNKSKKKKKKSSNREYETLAMPEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QRARDTLPQSESHQEESWLSVGPGGEITELPASAHKNKSKKKKKKSSNREYETLAMPEGS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 QAGREAGTDMQESQPTVGLDDETPQLLGPTHKKKSKKKKKKKSNHQEFEALAMPEGSQVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QAGREAGTDMQESQPTVGLDDETPQLLGPTHKKKSKKKKKKKSNHQEFEALAMPEGSQVG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 SEVGADMQESRPAVGLHGETAGIPAPAYKNKSKKKKKKSNHQEFEAVAMPESLESAYPEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SEVGADMQESRPAVGLHGETAGIPAPAYKNKSKKKKKKSNHQEFEAVAMPESLESAYPEG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 SQVGSEVGTVEGSTALKGFKESNSTKKKSKKRKLTSVKRARVSGDDFSVPSKNSESTLFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SQVGSEVGTVEGSTALKGFKESNSTKKKSKKRKLTSVKRARVSGDDFSVPSKNSESTLFD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 SVEGDGAMMEEGVKSRPRQKKTQACLASKHVQEAPRLEPANEEHNVETAEDSEIRYLSAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SVEGDGAMMEEGVKSRPRQKKTQACLASKHVQEAPRLEPANEEHNVETAEDSEIRYLSAD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 SGDADDSDADLGSAVKQLQEFIPNIKDRATSTIKRMYRDDLERFKEFKAQGVAIKFGKFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SGDADDSDADLGSAVKQLQEFIPNIKDRATSTIKRMYRDDLERFKEFKAQGVAIKFGKFS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 VKENKQLEKNVEDFLALTGIESADKLLYTDRYPEEKSVITNLKRRYSFRLHIGRNIARPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VKENKQLEKNVEDFLALTGIESADKLLYTDRYPEEKSVITNLKRRYSFRLHIGRNIARPW
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 KLIYYRAKKMFDVNNYKGRYSEGDTEKLKMYHSLLGNDWKTIGEMVARSSLSVALKFSQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KLIYYRAKKMFDVNNYKGRYSEGDTEKLKMYHSLLGNDWKTIGEMVARSSLSVALKFSQI
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 SSQRNRGAWSKSETRKLIKAVEEVILKKMSPQELKEVDSKLQENPESCLSIVREKLYKGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SSQRNRGAWSKSETRKLIKAVEEVILKKMSPQELKEVDSKLQENPESCLSIVREKLYKGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 SWVEVEAKVQTRNWMQCKSKWTEILTKRMTNGRRIYYGMNALRAKVSLIERLYEINVEDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SWVEVEAKVQTRNWMQCKSKWTEILTKRMTNGRRIYYGMNALRAKVSLIERLYEINVEDT
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 NEIDWEDLASAIGDVPPSYVQTKFSRLKAVYVPFWQKKTFPEIIDYLYETTLPLLKEKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NEIDWEDLASAIGDVPPSYVQTKFSRLKAVYVPFWQKKTFPEIIDYLYETTLPLLKEKLE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB0 KMMEKKGTKIQTPAAPKQVFPFRDIFYYEDDSEGEDIEKESEGQAPCMAHACNSSTLGGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KMMEKKGTKIQTPAAPKQVFPFRDIFYYEDDSEGEDIEKESEGQAPCMAHACNSSTLGGQ
850 860 870 880 890 900
pF1KB0 GRWII
:::::
XP_006 GRWII
>>NP_031370 (OMIM: 600777) transcription termination fac (905 aa)
initn: 5900 init1: 5900 opt: 5900 Z-score: 4626.6 bits: 867.3 E(85289): 0
Smith-Waterman score: 5900; 100.0% identity (100.0% similar) in 905 aa overlap (1-905:1-905)
10 20 30 40 50 60
pF1KB0 MEGESSRFEIHTPVSDKKKKKCSIHKERPQKHSHEIFRDSSLVNEQSQITRRKKRKKDFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 MEGESSRFEIHTPVSDKKKKKCSIHKERPQKHSHEIFRDSSLVNEQSQITRRKKRKKDFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 HLISSPLKKSRICDETANATSTLKKRKKRRYSALEVDEEAGVTVVLVDKENINNTPKHFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 HLISSPLKKSRICDETANATSTLKKRKKRRYSALEVDEEAGVTVVLVDKENINNTPKHFR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 KDVDVVCVDMSIEQKLPRKPKTDKFQVLAKSHAHKSEALHSKVREKKNKKHQRKAASWES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 KDVDVVCVDMSIEQKLPRKPKTDKFQVLAKSHAHKSEALHSKVREKKNKKHQRKAASWES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 QRARDTLPQSESHQEESWLSVGPGGEITELPASAHKNKSKKKKKKSSNREYETLAMPEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 QRARDTLPQSESHQEESWLSVGPGGEITELPASAHKNKSKKKKKKSSNREYETLAMPEGS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 QAGREAGTDMQESQPTVGLDDETPQLLGPTHKKKSKKKKKKKSNHQEFEALAMPEGSQVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 QAGREAGTDMQESQPTVGLDDETPQLLGPTHKKKSKKKKKKKSNHQEFEALAMPEGSQVG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 SEVGADMQESRPAVGLHGETAGIPAPAYKNKSKKKKKKSNHQEFEAVAMPESLESAYPEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 SEVGADMQESRPAVGLHGETAGIPAPAYKNKSKKKKKKSNHQEFEAVAMPESLESAYPEG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 SQVGSEVGTVEGSTALKGFKESNSTKKKSKKRKLTSVKRARVSGDDFSVPSKNSESTLFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 SQVGSEVGTVEGSTALKGFKESNSTKKKSKKRKLTSVKRARVSGDDFSVPSKNSESTLFD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 SVEGDGAMMEEGVKSRPRQKKTQACLASKHVQEAPRLEPANEEHNVETAEDSEIRYLSAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 SVEGDGAMMEEGVKSRPRQKKTQACLASKHVQEAPRLEPANEEHNVETAEDSEIRYLSAD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 SGDADDSDADLGSAVKQLQEFIPNIKDRATSTIKRMYRDDLERFKEFKAQGVAIKFGKFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 SGDADDSDADLGSAVKQLQEFIPNIKDRATSTIKRMYRDDLERFKEFKAQGVAIKFGKFS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 VKENKQLEKNVEDFLALTGIESADKLLYTDRYPEEKSVITNLKRRYSFRLHIGRNIARPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 VKENKQLEKNVEDFLALTGIESADKLLYTDRYPEEKSVITNLKRRYSFRLHIGRNIARPW
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 KLIYYRAKKMFDVNNYKGRYSEGDTEKLKMYHSLLGNDWKTIGEMVARSSLSVALKFSQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 KLIYYRAKKMFDVNNYKGRYSEGDTEKLKMYHSLLGNDWKTIGEMVARSSLSVALKFSQI
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 SSQRNRGAWSKSETRKLIKAVEEVILKKMSPQELKEVDSKLQENPESCLSIVREKLYKGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 SSQRNRGAWSKSETRKLIKAVEEVILKKMSPQELKEVDSKLQENPESCLSIVREKLYKGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 SWVEVEAKVQTRNWMQCKSKWTEILTKRMTNGRRIYYGMNALRAKVSLIERLYEINVEDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 SWVEVEAKVQTRNWMQCKSKWTEILTKRMTNGRRIYYGMNALRAKVSLIERLYEINVEDT
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 NEIDWEDLASAIGDVPPSYVQTKFSRLKAVYVPFWQKKTFPEIIDYLYETTLPLLKEKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 NEIDWEDLASAIGDVPPSYVQTKFSRLKAVYVPFWQKKTFPEIIDYLYETTLPLLKEKLE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB0 KMMEKKGTKIQTPAAPKQVFPFRDIFYYEDDSEGEDIEKESEGQAPCMAHACNSSTLGGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 KMMEKKGTKIQTPAAPKQVFPFRDIFYYEDDSEGEDIEKESEGQAPCMAHACNSSTLGGQ
850 860 870 880 890 900
pF1KB0 GRWII
:::::
NP_031 GRWII
>>XP_016870594 (OMIM: 600777) PREDICTED: transcription t (938 aa)
initn: 5900 init1: 5900 opt: 5900 Z-score: 4626.4 bits: 867.3 E(85289): 0
Smith-Waterman score: 5900; 100.0% identity (100.0% similar) in 905 aa overlap (1-905:34-938)
10 20 30
pF1KB0 MEGESSRFEIHTPVSDKKKKKCSIHKERPQ
::::::::::::::::::::::::::::::
XP_016 SHLVSSSSLSPGAPTREQSGVSLAPQRRNKMEGESSRFEIHTPVSDKKKKKCSIHKERPQ
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB0 KHSHEIFRDSSLVNEQSQITRRKKRKKDFQHLISSPLKKSRICDETANATSTLKKRKKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KHSHEIFRDSSLVNEQSQITRRKKRKKDFQHLISSPLKKSRICDETANATSTLKKRKKRR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB0 YSALEVDEEAGVTVVLVDKENINNTPKHFRKDVDVVCVDMSIEQKLPRKPKTDKFQVLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YSALEVDEEAGVTVVLVDKENINNTPKHFRKDVDVVCVDMSIEQKLPRKPKTDKFQVLAK
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB0 SHAHKSEALHSKVREKKNKKHQRKAASWESQRARDTLPQSESHQEESWLSVGPGGEITEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SHAHKSEALHSKVREKKNKKHQRKAASWESQRARDTLPQSESHQEESWLSVGPGGEITEL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB0 PASAHKNKSKKKKKKSSNREYETLAMPEGSQAGREAGTDMQESQPTVGLDDETPQLLGPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PASAHKNKSKKKKKKSSNREYETLAMPEGSQAGREAGTDMQESQPTVGLDDETPQLLGPT
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB0 HKKKSKKKKKKKSNHQEFEALAMPEGSQVGSEVGADMQESRPAVGLHGETAGIPAPAYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKKKSKKKKKKKSNHQEFEALAMPEGSQVGSEVGADMQESRPAVGLHGETAGIPAPAYKN
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB0 KSKKKKKKSNHQEFEAVAMPESLESAYPEGSQVGSEVGTVEGSTALKGFKESNSTKKKSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KSKKKKKKSNHQEFEAVAMPESLESAYPEGSQVGSEVGTVEGSTALKGFKESNSTKKKSK
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB0 KRKLTSVKRARVSGDDFSVPSKNSESTLFDSVEGDGAMMEEGVKSRPRQKKTQACLASKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRKLTSVKRARVSGDDFSVPSKNSESTLFDSVEGDGAMMEEGVKSRPRQKKTQACLASKH
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB0 VQEAPRLEPANEEHNVETAEDSEIRYLSADSGDADDSDADLGSAVKQLQEFIPNIKDRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQEAPRLEPANEEHNVETAEDSEIRYLSADSGDADDSDADLGSAVKQLQEFIPNIKDRAT
490 500 510 520 530 540
520 530 540 550 560 570
pF1KB0 STIKRMYRDDLERFKEFKAQGVAIKFGKFSVKENKQLEKNVEDFLALTGIESADKLLYTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STIKRMYRDDLERFKEFKAQGVAIKFGKFSVKENKQLEKNVEDFLALTGIESADKLLYTD
550 560 570 580 590 600
580 590 600 610 620 630
pF1KB0 RYPEEKSVITNLKRRYSFRLHIGRNIARPWKLIYYRAKKMFDVNNYKGRYSEGDTEKLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RYPEEKSVITNLKRRYSFRLHIGRNIARPWKLIYYRAKKMFDVNNYKGRYSEGDTEKLKM
610 620 630 640 650 660
640 650 660 670 680 690
pF1KB0 YHSLLGNDWKTIGEMVARSSLSVALKFSQISSQRNRGAWSKSETRKLIKAVEEVILKKMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YHSLLGNDWKTIGEMVARSSLSVALKFSQISSQRNRGAWSKSETRKLIKAVEEVILKKMS
670 680 690 700 710 720
700 710 720 730 740 750
pF1KB0 PQELKEVDSKLQENPESCLSIVREKLYKGISWVEVEAKVQTRNWMQCKSKWTEILTKRMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQELKEVDSKLQENPESCLSIVREKLYKGISWVEVEAKVQTRNWMQCKSKWTEILTKRMT
730 740 750 760 770 780
760 770 780 790 800 810
pF1KB0 NGRRIYYGMNALRAKVSLIERLYEINVEDTNEIDWEDLASAIGDVPPSYVQTKFSRLKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGRRIYYGMNALRAKVSLIERLYEINVEDTNEIDWEDLASAIGDVPPSYVQTKFSRLKAV
790 800 810 820 830 840
820 830 840 850 860 870
pF1KB0 YVPFWQKKTFPEIIDYLYETTLPLLKEKLEKMMEKKGTKIQTPAAPKQVFPFRDIFYYED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YVPFWQKKTFPEIIDYLYETTLPLLKEKLEKMMEKKGTKIQTPAAPKQVFPFRDIFYYED
850 860 870 880 890 900
880 890 900
pF1KB0 DSEGEDIEKESEGQAPCMAHACNSSTLGGQGRWII
:::::::::::::::::::::::::::::::::::
XP_016 DSEGEDIEKESEGQAPCMAHACNSSTLGGQGRWII
910 920 930
>>NP_001192225 (OMIM: 600777) transcription termination (390 aa)
initn: 2572 init1: 2572 opt: 2572 Z-score: 2028.4 bits: 385.3 E(85289): 3.1e-106
Smith-Waterman score: 2572; 100.0% identity (100.0% similar) in 390 aa overlap (516-905:1-390)
490 500 510 520 530 540
pF1KB0 DSDADLGSAVKQLQEFIPNIKDRATSTIKRMYRDDLERFKEFKAQGVAIKFGKFSVKENK
::::::::::::::::::::::::::::::
NP_001 MYRDDLERFKEFKAQGVAIKFGKFSVKENK
10 20 30
550 560 570 580 590 600
pF1KB0 QLEKNVEDFLALTGIESADKLLYTDRYPEEKSVITNLKRRYSFRLHIGRNIARPWKLIYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLEKNVEDFLALTGIESADKLLYTDRYPEEKSVITNLKRRYSFRLHIGRNIARPWKLIYY
40 50 60 70 80 90
610 620 630 640 650 660
pF1KB0 RAKKMFDVNNYKGRYSEGDTEKLKMYHSLLGNDWKTIGEMVARSSLSVALKFSQISSQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RAKKMFDVNNYKGRYSEGDTEKLKMYHSLLGNDWKTIGEMVARSSLSVALKFSQISSQRN
100 110 120 130 140 150
670 680 690 700 710 720
pF1KB0 RGAWSKSETRKLIKAVEEVILKKMSPQELKEVDSKLQENPESCLSIVREKLYKGISWVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGAWSKSETRKLIKAVEEVILKKMSPQELKEVDSKLQENPESCLSIVREKLYKGISWVEV
160 170 180 190 200 210
730 740 750 760 770 780
pF1KB0 EAKVQTRNWMQCKSKWTEILTKRMTNGRRIYYGMNALRAKVSLIERLYEINVEDTNEIDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAKVQTRNWMQCKSKWTEILTKRMTNGRRIYYGMNALRAKVSLIERLYEINVEDTNEIDW
220 230 240 250 260 270
790 800 810 820 830 840
pF1KB0 EDLASAIGDVPPSYVQTKFSRLKAVYVPFWQKKTFPEIIDYLYETTLPLLKEKLEKMMEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDLASAIGDVPPSYVQTKFSRLKAVYVPFWQKKTFPEIIDYLYETTLPLLKEKLEKMMEK
280 290 300 310 320 330
850 860 870 880 890 900
pF1KB0 KGTKIQTPAAPKQVFPFRDIFYYEDDSEGEDIEKESEGQAPCMAHACNSSTLGGQGRWII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGTKIQTPAAPKQVFPFRDIFYYEDDSEGEDIEKESEGQAPCMAHACNSSTLGGQGRWII
340 350 360 370 380 390
>>XP_016868359 (OMIM: 608491) PREDICTED: cyclin-D-bindin (667 aa)
initn: 237 init1: 153 opt: 208 Z-score: 175.8 bits: 43.3 E(85289): 0.0047
Smith-Waterman score: 384; 25.8% identity (54.3% similar) in 372 aa overlap (464-827:35-365)
440 450 460 470 480 490
pF1KB0 KSRPRQKKTQACLASKHVQEAPRLEPANEEHNVETAEDSEIRYLSADSGDADDSDADLGS
.:: ..: ..: . ::: .. :.
XP_016 EEDSDTVTVETVNSVTLTQDTEGNLILHCPQNVSENDQSFEVTMTATTEVADD-EVTEGT
10 20 30 40 50 60
500 510 520 530 540
pF1KB0 AVK-------QLQEFIPNIKDRATSTIKRMYRDDLERFKEFKAQGVAIKFGKFSVKENKQ
... ::.:. : . .. .:.... . : . .: : : .: .:
XP_016 VTQIQILQNEQLDEISP-LGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDI
70 80 90 100 110 120
550 560 570 580 590 600
pF1KB0 LEKNVEDFLALTGIESADKLLYTDRYPEEKSVITNLKRRYSFRLHIGRNIARPWKLIYYR
: .:.: .: ::..: .... :.:. : :. .. :: .: :
XP_016 LMNNIERYLKARGIKDATEIIFEMSKDERKD----------FYRTIAWGLNRPLFAVYRR
130 140 150 160 170
610 620 630 640 650 660
pF1KB0 AKKMFDVNNYKGRYSEGDTEKLKMYHSLLGNDWKTIGEMVARSSLSVALKFSQISSQRNR
. .:.: :. :.:. . :::: . :::: ::: ..::. :: . ... :
XP_016 VLRMYDDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAALGRSASSVKDRCRLMKDTCNT
180 190 200 210 220 230
670 680 690 700 710 720
pF1KB0 GAWSKSETRKLIKAVEEVILKKMSPQELKEVDSKLQENPESCLSIVREKLYKGISWVEVE
: :.. : ..: ..:.: : . : .. . .:.::. :
XP_016 GKWTEEEEKRLAEVVHE--LTSTEPGDI---------------------VTQGVSWAAVA
240 250 260
730 740 750 760 770 780
pF1KB0 AKVQTRNWMQCKSKWTEILTKRMTNGRRIYYGMNALRAKVSLIERLYEINVEDTNEIDWE
.: ::. ::.::: . :. ....: . . . ...:: :. :..: : :.:.:.
XP_016 ERVGTRSEKQCRSKWLNYLNWKQSGGTEW-----TKEDEINLILRIAELDVADENDINWD
270 280 290 300 310 320
790 800 810 820 830 840
pF1KB0 DLASAIGDV-PPSYVQTKFSRLKAVYVPFWQKKTFPEIIDYLYETTLPLLKEKLEKMMEK
:: . ..: :.....:. .: . . .:: .: :
XP_016 LLAEGWSSVRSPQWLRSKWWTIKR-QIANHKDVSFPVLIKGLKQLHENQKNNPTLLENKS
330 340 350 360 370 380
850 860 870 880 890 900
pF1KB0 KGTKIQTPAAPKQVFPFRDIFYYEDDSEGEDIEKESEGQAPCMAHACNSSTLGGQGRWII
XP_016 GSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQIPVQITHVSSADSPATVDSETI
390 400 410 420 430 440
>>NP_001135798 (OMIM: 608491) cyclin-D-binding Myb-like (672 aa)
initn: 237 init1: 153 opt: 208 Z-score: 175.8 bits: 43.3 E(85289): 0.0047
Smith-Waterman score: 381; 26.4% identity (55.0% similar) in 333 aa overlap (496-827:26-318)
470 480 490 500 510 520
pF1KB0 VETAEDSEIRYLSADSGDADDSDADLGSAVKQLQEFIPNIKDRATSTIKRMYRDDLERFK
.::.:. : . .. .:.... . :
NP_001 MTATTEVADDEVTEGTVTQIQILQNEQLDEISP-LGNEEVSAVSQAWFTTKEDKD
10 20 30 40 50
530 540 550 560 570 580
pF1KB0 EFKAQGVAIKFGKFSVKENKQLEKNVEDFLALTGIESADKLLYTDRYPEEKSVITNLKRR
. .: : : .: .: : .:.: .: ::..: .... :.:.
NP_001 SLTNKGHKWKQGMWSKEEIDILMNNIERYLKARGIKDATEIIFEMSKDERKD--------
60 70 80 90 100
590 600 610 620 630 640
pF1KB0 YSFRLHIGRNIARPWKLIYYRAKKMFDVNNYKGRYSEGDTEKLKMYHSLLGNDWKTIGEM
: :. .. :: .: :. .:.: :. :.:. . :::: . :::: :::
NP_001 --FYRTIAWGLNRPLFAVYRRVLRMYDDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAA
110 120 130 140 150 160
650 660 670 680 690 700
pF1KB0 VARSSLSVALKFSQISSQRNRGAWSKSETRKLIKAVEEVILKKMSPQELKEVDSKLQENP
..::. :: . ... : : :.. : ..: ..:.: : . : ..
NP_001 LGRSASSVKDRCRLMKDTCNTGKWTEEEEKRLAEVVHE--LTSTEPGDI-----------
170 180 190 200 210
710 720 730 740 750 760
pF1KB0 ESCLSIVREKLYKGISWVEVEAKVQTRNWMQCKSKWTEILTKRMTNGRRIYYGMNALRAK
. .:.::. : .: ::. ::.::: . :. ....: . . . .
NP_001 ----------VTQGVSWAAVAERVGTRSEKQCRSKWLNYLNWKQSGGTEW-----TKEDE
220 230 240 250
770 780 790 800 810 820
pF1KB0 VSLIERLYEINVEDTNEIDWEDLASAIGDV-PPSYVQTKFSRLKAVYVPFWQKKTFPEII
..:: :. :..: : :.:.:. :: . ..: :.....:. .: . . .:: .:
NP_001 INLILRIAELDVADENDINWDLLAEGWSSVRSPQWLRSKWWTIKR-QIANHKDVSFPVLI
260 270 280 290 300 310
830 840 850 860 870 880
pF1KB0 DYLYETTLPLLKEKLEKMMEKKGTKIQTPAAPKQVFPFRDIFYYEDDSEGEDIEKESEGQ
:
NP_001 KGLKQLHENQKNNPTLLENKSGSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQI
320 330 340 350 360 370
>>XP_016868358 (OMIM: 608491) PREDICTED: cyclin-D-bindin (701 aa)
initn: 237 init1: 153 opt: 208 Z-score: 175.5 bits: 43.3 E(85289): 0.0049
Smith-Waterman score: 382; 25.5% identity (55.1% similar) in 376 aa overlap (460-827:14-347)
430 440 450 460 470 480
pF1KB0 EEGVKSRPRQKKTQACLASKHVQEAPRLEPANEEHNVETAEDSEIRYLSADSGDADDSDA
:.... :. .. :. ..: . ::: ..
XP_016 MVVNQILHGAVHLASDNRVSENDQSFEVT-MTATTEVADD-EV
10 20 30 40
490 500 510 520 530 540
pF1KB0 DLGSAVK-------QLQEFIPNIKDRATSTIKRMYRDDLERFKEFKAQGVAIKFGKFSVK
:.... ::.:. : . .. .:.... . : . .: : : .: .
XP_016 TEGTVTQIQILQNEQLDEISP-LGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKE
50 60 70 80 90 100
550 560 570 580 590 600
pF1KB0 ENKQLEKNVEDFLALTGIESADKLLYTDRYPEEKSVITNLKRRYSFRLHIGRNIARPWKL
: : .:.: .: ::..: .... :.:. : :. .. ::
XP_016 EIDILMNNIERYLKARGIKDATEIIFEMSKDERKD----------FYRTIAWGLNRPLFA
110 120 130 140 150
610 620 630 640 650 660
pF1KB0 IYYRAKKMFDVNNYKGRYSEGDTEKLKMYHSLLGNDWKTIGEMVARSSLSVALKFSQISS
.: :. .:.: :. :.:. . :::: . :::: ::: ..::. :: . ...
XP_016 VYRRVLRMYDDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAALGRSASSVKDRCRLMKD
160 170 180 190 200 210
670 680 690 700 710 720
pF1KB0 QRNRGAWSKSETRKLIKAVEEVILKKMSPQELKEVDSKLQENPESCLSIVREKLYKGISW
: : :.. : ..: ..:.: : . : .. . .:.::
XP_016 TCNTGKWTEEEEKRLAEVVHE--LTSTEPGDI---------------------VTQGVSW
220 230 240
730 740 750 760 770 780
pF1KB0 VEVEAKVQTRNWMQCKSKWTEILTKRMTNGRRIYYGMNALRAKVSLIERLYEINVEDTNE
. : .: ::. ::.::: . :. ....: . . . ...:: :. :..: : :.
XP_016 AAVAERVGTRSEKQCRSKWLNYLNWKQSGGTEW-----TKEDEINLILRIAELDVADEND
250 260 270 280 290 300
790 800 810 820 830 840
pF1KB0 IDWEDLASAIGDV-PPSYVQTKFSRLKAVYVPFWQKKTFPEIIDYLYETTLPLLKEKLEK
:.:. :: . ..: :.....:. .: . . .:: .: :
XP_016 INWDLLAEGWSSVRSPQWLRSKWWTIKR-QIANHKDVSFPVLIKGLKQLHENQKNNPTLL
310 320 330 340 350 360
850 860 870 880 890 900
pF1KB0 MMEKKGTKIQTPAAPKQVFPFRDIFYYEDDSEGEDIEKESEGQAPCMAHACNSSTLGGQG
XP_016 ENKSGSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQIPVQITHVSSADSPATVD
370 380 390 400 410 420
>>XP_016868357 (OMIM: 608491) PREDICTED: cyclin-D-bindin (708 aa)
initn: 237 init1: 153 opt: 208 Z-score: 175.5 bits: 43.3 E(85289): 0.0049
Smith-Waterman score: 389; 24.6% identity (53.4% similar) in 414 aa overlap (423-827:37-406)
400 410 420 430 440 450
pF1KB0 KLTSVKRARVSGDDFSVPSKNSESTLFDSVEGDGAMMEEGVKSRPRQKKTQACLASKHVQ
:.: :.... : .:. ::.:. :
XP_016 DSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIE--PPHKRL--CLSSEDDQ
10 20 30 40 50 60
460 470 480 490 500
pF1KB0 EAPRLEPANEEHNVETAE-DSEIRYLSADSGDADDSDADLGSAVK-------QLQEFIPN
: . .: :. .. . . .. :... :.... ::.:. :
XP_016 SIDDSTPCISVVALPLSENDQSFEVTMTATTEVADDEVTEGTVTQIQILQNEQLDEISP-
70 80 90 100 110 120
510 520 530 540 550 560
pF1KB0 IKDRATSTIKRMYRDDLERFKEFKAQGVAIKFGKFSVKENKQLEKNVEDFLALTGIESAD
. .. .:.... . : . .: : : .: .: : .:.: .: ::..:
XP_016 LGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDILMNNIERYLKARGIKDAT
130 140 150 160 170 180
570 580 590 600 610 620
pF1KB0 KLLYTDRYPEEKSVITNLKRRYSFRLHIGRNIARPWKLIYYRAKKMFDVNNYKGRYSEGD
.... :.:. : :. .. :: .: :. .:.: :. :.:. .
XP_016 EIIFEMSKDERKD----------FYRTIAWGLNRPLFAVYRRVLRMYDDRNHVGKYTPEE
190 200 210 220 230
630 640 650 660 670 680
pF1KB0 TEKLKMYHSLLGNDWKTIGEMVARSSLSVALKFSQISSQRNRGAWSKSETRKLIKAVEEV
:::: . :::: ::: ..::. :: . ... : : :.. : ..: ..:.:
XP_016 IEKLKELRIKHGNDWATIGAALGRSASSVKDRCRLMKDTCNTGKWTEEEEKRLAEVVHE-
240 250 260 270 280 290
690 700 710 720 730 740
pF1KB0 ILKKMSPQELKEVDSKLQENPESCLSIVREKLYKGISWVEVEAKVQTRNWMQCKSKWTEI
: . : .. . .:.::. : .: ::. ::.::: .
XP_016 -LTSTEPGDI---------------------VTQGVSWAAVAERVGTRSEKQCRSKWLNY
300 310 320
750 760 770 780 790 800
pF1KB0 LTKRMTNGRRIYYGMNALRAKVSLIERLYEINVEDTNEIDWEDLASAIGDV-PPSYVQTK
:. ....: . . . ...:: :. :..: : :.:.:. :: . ..: :.....:
XP_016 LNWKQSGGTEW-----TKEDEINLILRIAELDVADENDINWDLLAEGWSSVRSPQWLRSK
330 340 350 360 370 380
810 820 830 840 850 860
pF1KB0 FSRLKAVYVPFWQKKTFPEIIDYLYETTLPLLKEKLEKMMEKKGTKIQTPAAPKQVFPFR
. .: . . .:: .: :
XP_016 WWTIKR-QIANHKDVSFPVLIKGLKQLHENQKNNPTLLENKSGSGVPNSNTNSSVQHVQI
390 400 410 420 430 440
>>XP_016868356 (OMIM: 608491) PREDICTED: cyclin-D-bindin (719 aa)
initn: 237 init1: 153 opt: 208 Z-score: 175.4 bits: 43.3 E(85289): 0.005
Smith-Waterman score: 384; 25.8% identity (54.3% similar) in 372 aa overlap (464-827:35-365)
440 450 460 470 480 490
pF1KB0 KSRPRQKKTQACLASKHVQEAPRLEPANEEHNVETAEDSEIRYLSADSGDADDSDADLGS
.:: ..: ..: . ::: .. :.
XP_016 EEDSDTVTVETVNSVTLTQDTEGNLILHCPQNVSENDQSFEVTMTATTEVADD-EVTEGT
10 20 30 40 50 60
500 510 520 530 540
pF1KB0 AVK-------QLQEFIPNIKDRATSTIKRMYRDDLERFKEFKAQGVAIKFGKFSVKENKQ
... ::.:. : . .. .:.... . : . .: : : .: .:
XP_016 VTQIQILQNEQLDEISP-LGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDI
70 80 90 100 110 120
550 560 570 580 590 600
pF1KB0 LEKNVEDFLALTGIESADKLLYTDRYPEEKSVITNLKRRYSFRLHIGRNIARPWKLIYYR
: .:.: .: ::..: .... :.:. : :. .. :: .: :
XP_016 LMNNIERYLKARGIKDATEIIFEMSKDERKD----------FYRTIAWGLNRPLFAVYRR
130 140 150 160 170
610 620 630 640 650 660
pF1KB0 AKKMFDVNNYKGRYSEGDTEKLKMYHSLLGNDWKTIGEMVARSSLSVALKFSQISSQRNR
. .:.: :. :.:. . :::: . :::: ::: ..::. :: . ... :
XP_016 VLRMYDDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAALGRSASSVKDRCRLMKDTCNT
180 190 200 210 220 230
670 680 690 700 710 720
pF1KB0 GAWSKSETRKLIKAVEEVILKKMSPQELKEVDSKLQENPESCLSIVREKLYKGISWVEVE
: :.. : ..: ..:.: : . : .. . .:.::. :
XP_016 GKWTEEEEKRLAEVVHE--LTSTEPGDI---------------------VTQGVSWAAVA
240 250 260
730 740 750 760 770 780
pF1KB0 AKVQTRNWMQCKSKWTEILTKRMTNGRRIYYGMNALRAKVSLIERLYEINVEDTNEIDWE
.: ::. ::.::: . :. ....: . . . ...:: :. :..: : :.:.:.
XP_016 ERVGTRSEKQCRSKWLNYLNWKQSGGTEW-----TKEDEINLILRIAELDVADENDINWD
270 280 290 300 310 320
790 800 810 820 830 840
pF1KB0 DLASAIGDV-PPSYVQTKFSRLKAVYVPFWQKKTFPEIIDYLYETTLPLLKEKLEKMMEK
:: . ..: :.....:. .: . . .:: .: :
XP_016 LLAEGWSSVRSPQWLRSKWWTIKR-QIANHKDVSFPVLIKGLKQLHENQKNNPTLLENKS
330 340 350 360 370 380
850 860 870 880 890 900
pF1KB0 KGTKIQTPAAPKQVFPFRDIFYYEDDSEGEDIEKESEGQAPCMAHACNSSTLGGQGRWII
XP_016 GSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQIPVQITHVSSADSPATVDSETI
390 400 410 420 430 440
>>XP_011515041 (OMIM: 608491) PREDICTED: cyclin-D-bindin (719 aa)
initn: 237 init1: 153 opt: 208 Z-score: 175.4 bits: 43.3 E(85289): 0.005
Smith-Waterman score: 384; 25.8% identity (54.3% similar) in 372 aa overlap (464-827:35-365)
440 450 460 470 480 490
pF1KB0 KSRPRQKKTQACLASKHVQEAPRLEPANEEHNVETAEDSEIRYLSADSGDADDSDADLGS
.:: ..: ..: . ::: .. :.
XP_011 EEDSDTVTVETVNSVTLTQDTEGNLILHCPQNVSENDQSFEVTMTATTEVADD-EVTEGT
10 20 30 40 50 60
500 510 520 530 540
pF1KB0 AVK-------QLQEFIPNIKDRATSTIKRMYRDDLERFKEFKAQGVAIKFGKFSVKENKQ
... ::.:. : . .. .:.... . : . .: : : .: .:
XP_011 VTQIQILQNEQLDEISP-LGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDI
70 80 90 100 110 120
550 560 570 580 590 600
pF1KB0 LEKNVEDFLALTGIESADKLLYTDRYPEEKSVITNLKRRYSFRLHIGRNIARPWKLIYYR
: .:.: .: ::..: .... :.:. : :. .. :: .: :
XP_011 LMNNIERYLKARGIKDATEIIFEMSKDERKD----------FYRTIAWGLNRPLFAVYRR
130 140 150 160 170
610 620 630 640 650 660
pF1KB0 AKKMFDVNNYKGRYSEGDTEKLKMYHSLLGNDWKTIGEMVARSSLSVALKFSQISSQRNR
. .:.: :. :.:. . :::: . :::: ::: ..::. :: . ... :
XP_011 VLRMYDDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAALGRSASSVKDRCRLMKDTCNT
180 190 200 210 220 230
670 680 690 700 710 720
pF1KB0 GAWSKSETRKLIKAVEEVILKKMSPQELKEVDSKLQENPESCLSIVREKLYKGISWVEVE
: :.. : ..: ..:.: : . : .. . .:.::. :
XP_011 GKWTEEEEKRLAEVVHE--LTSTEPGDI---------------------VTQGVSWAAVA
240 250 260
730 740 750 760 770 780
pF1KB0 AKVQTRNWMQCKSKWTEILTKRMTNGRRIYYGMNALRAKVSLIERLYEINVEDTNEIDWE
.: ::. ::.::: . :. ....: . . . ...:: :. :..: : :.:.:.
XP_011 ERVGTRSEKQCRSKWLNYLNWKQSGGTEW-----TKEDEINLILRIAELDVADENDINWD
270 280 290 300 310 320
790 800 810 820 830 840
pF1KB0 DLASAIGDV-PPSYVQTKFSRLKAVYVPFWQKKTFPEIIDYLYETTLPLLKEKLEKMMEK
:: . ..: :.....:. .: . . .:: .: :
XP_011 LLAEGWSSVRSPQWLRSKWWTIKR-QIANHKDVSFPVLIKGLKQLHENQKNNPTLLENKS
330 340 350 360 370 380
850 860 870 880 890 900
pF1KB0 KGTKIQTPAAPKQVFPFRDIFYYEDDSEGEDIEKESEGQAPCMAHACNSSTLGGQGRWII
XP_011 GSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQIPVQITHVSSADSPATVDSETI
390 400 410 420 430 440
905 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 20:28:13 2016 done: Sun Nov 6 20:28:15 2016
Total Scan time: 13.250 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]