Result of FASTA (omim) for
pFN21AB0433
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0433, 456 aa
1>>>pF1KB0433 456 - 456 aa - 456 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2325+/-0.000298; mu= 19.0597+/- 0.019
mean_var=77.9259+/-15.314, 0's: 0 Z-trim(118.5): 6 B-trim: 0 in 0/53
Lambda= 0.145289
statistics sampled from 31502 (31508) to 31502 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.369), width: 16
Scan time: 10.310
The best scores are: opt bits E(85289)
NP_073571 (OMIM: 616091) methyltransferase-like pr ( 456) 3139 667.2 2.5e-191
NP_001025162 (OMIM: 616091) methyltransferase-like ( 478) 2902 617.5 2.4e-176
XP_016877090 (OMIM: 616091) PREDICTED: methyltrans ( 298) 2082 445.5 9.1e-125
XP_006720299 (OMIM: 616091) PREDICTED: methyltrans ( 320) 1845 395.8 8.7e-110
>>NP_073571 (OMIM: 616091) methyltransferase-like protei (456 aa)
initn: 3139 init1: 3139 opt: 3139 Z-score: 3555.8 bits: 667.2 E(85289): 2.5e-191
Smith-Waterman score: 3139; 100.0% identity (100.0% similar) in 456 aa overlap (1-456:1-456)
10 20 30 40 50 60
pF1KB0 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH
370 380 390 400 410 420
430 440 450
pF1KB0 GRDLYRCARVSSWGDLLPVLTPSAFPPSTAQDPSES
::::::::::::::::::::::::::::::::::::
NP_073 GRDLYRCARVSSWGDLLPVLTPSAFPPSTAQDPSES
430 440 450
>>NP_001025162 (OMIM: 616091) methyltransferase-like pro (478 aa)
initn: 2901 init1: 2901 opt: 2902 Z-score: 3287.0 bits: 617.5 E(85289): 2.4e-176
Smith-Waterman score: 2902; 95.5% identity (96.4% similar) in 448 aa overlap (1-446:1-445)
10 20 30 40 50 60
pF1KB0 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH
370 380 390 400 410 420
430 440 450
pF1KB0 GRDLYRCARVSSWGDLLPVLTPSA--FPPSTAQDPSES
:: : ..: :. .: ::
NP_001 GR--YGGCDQNQW-DVAGSCSPRQHLFPQGFVSLCPCQLLGRSFTCAYSVCVSSIYGSGS
430 440 450 460 470
>>XP_016877090 (OMIM: 616091) PREDICTED: methyltransfera (298 aa)
initn: 2082 init1: 2082 opt: 2082 Z-score: 2360.9 bits: 445.5 E(85289): 9.1e-125
Smith-Waterman score: 2082; 100.0% identity (100.0% similar) in 298 aa overlap (159-456:1-298)
130 140 150 160 170 180
pF1KB0 KLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRARNPAFQPQT
::::::::::::::::::::::::::::::
XP_016 MAARLDGGFAAVSRAFHEIRARNPAFQPQT
10 20 30
190 200 210 220 230 240
pF1KB0 LMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEPYIPGVFFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEPYIPGVFFR
40 50 60 70 80 90
250 260 270 280 290 300
pF1KB0 QFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTKAGHSLLMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTKAGHSLLMD
100 110 120 130 140 150
310 320 330 340 350 360
pF1KB0 ARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSWNKKPKEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSWNKKPKEEK
160 170 180 190 200 210
370 380 390 400 410 420
pF1KB0 FSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRHGRDLYRCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRHGRDLYRCA
220 230 240 250 260 270
430 440 450
pF1KB0 RVSSWGDLLPVLTPSAFPPSTAQDPSES
::::::::::::::::::::::::::::
XP_016 RVSSWGDLLPVLTPSAFPPSTAQDPSES
280 290
>>XP_006720299 (OMIM: 616091) PREDICTED: methyltransfera (320 aa)
initn: 1844 init1: 1844 opt: 1845 Z-score: 2092.0 bits: 395.8 E(85289): 8.7e-110
Smith-Waterman score: 1845; 93.1% identity (94.5% similar) in 290 aa overlap (159-446:1-287)
130 140 150 160 170 180
pF1KB0 KLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRARNPAFQPQT
::::::::::::::::::::::::::::::
XP_006 MAARLDGGFAAVSRAFHEIRARNPAFQPQT
10 20 30
190 200 210 220 230 240
pF1KB0 LMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEPYIPGVFFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEPYIPGVFFR
40 50 60 70 80 90
250 260 270 280 290 300
pF1KB0 QFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTKAGHSLLMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTKAGHSLLMD
100 110 120 130 140 150
310 320 330 340 350 360
pF1KB0 ARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSWNKKPKEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSWNKKPKEEK
160 170 180 190 200 210
370 380 390 400 410 420
pF1KB0 FSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRHGRDLYRCA
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :
XP_006 FSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRHGR--YGGC
220 230 240 250 260
430 440 450
pF1KB0 RVSSWGDLLPVLTPSA--FPPSTAQDPSES
..: :. .: ::
XP_006 DQNQW-DVAGSCSPRQHLFPQGFVSLCPCQLLGRSFTCAYSVCVSSIYGSGSL
270 280 290 300 310 320
456 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 14:30:50 2016 done: Sun Nov 6 14:30:51 2016
Total Scan time: 10.310 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]