Result of FASTA (ccds) for
pFN21AB0402
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0402, 644 aa
1>>>pF1KB0402 644 - 644 aa - 644 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6737+/-0.00092; mu= 13.5047+/- 0.056
mean_var=110.7395+/-21.528, 0's: 0 Z-trim(108.8): 36 B-trim: 0 in 0/51
Lambda= 0.121877
statistics sampled from 10456 (10482) to 10456 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.322), width: 16
Scan time: 2.170
The best scores are: opt bits E(32554)
CCDS43183.1 KNG1 gene_id:3827|Hs108|chr3 ( 644) 4458 795.0 0
CCDS3281.1 KNG1 gene_id:3827|Hs108|chr3 ( 427) 2692 484.4 1.4e-136
CCDS54695.1 KNG1 gene_id:3827|Hs108|chr3 ( 391) 1247 230.3 3.9e-60
>>CCDS43183.1 KNG1 gene_id:3827|Hs108|chr3 (644 aa)
initn: 4458 init1: 4458 opt: 4458 Z-score: 4241.3 bits: 795.0 E(32554): 0
Smith-Waterman score: 4458; 100.0% identity (100.0% similar) in 644 aa overlap (1-644:1-644)
10 20 30 40 50 60
pF1KB0 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 EVKRAQRQVVAGLNFRITYSIVQTNCSKENFLFLTPDCKSLWNGDTGECTDNAYIDIQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EVKRAQRQVVAGLNFRITYSIVQTNCSKENFLFLTPDCKSLWNGDTGECTDNAYIDIQLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 IDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYVVPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYVVPW
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 EKKIYPTVNCQPLGMISLMKRPPGFSPFRSSRIGEIKEETTVSPPHTSMAPAQDEERDSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EKKIYPTVNCQPLGMISLMKRPPGFSPFRSSRIGEIKEETTVSPPHTSMAPAQDEERDSG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 KEQGHTRRHDWGHEKQRKHNLGHGHKHERDQGHGHQRGHGLGHGHEQQHGLGHGHKFKLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KEQGHTRRHDWGHEKQRKHNLGHGHKHERDQGHGHQRGHGLGHGHEQQHGLGHGHKFKLD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 DDLEHQGGHVLDHGHKHKHGHGHGKHKNKGKKNGKHNGWKTEHLASSSEDSTTPSAQTQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DDLEHQGGHVLDHGHKHKHGHGHGKHKNKGKKNGKHNGWKTEHLASSSEDSTTPSAQTQE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 KTEGPTPIPSLAKPGVTVTFSDFQDSDLIATMMPPISPAPIQSDDDWIPDIQIDPNGLSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KTEGPTPIPSLAKPGVTVTFSDFQDSDLIATMMPPISPAPIQSDDDWIPDIQIDPNGLSF
550 560 570 580 590 600
610 620 630 640
pF1KB0 NPISDFPDTTSPKCPGRPWKSVSEINPTTQMKESYYFDLTDGLS
::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NPISDFPDTTSPKCPGRPWKSVSEINPTTQMKESYYFDLTDGLS
610 620 630 640
>>CCDS3281.1 KNG1 gene_id:3827|Hs108|chr3 (427 aa)
initn: 2719 init1: 2692 opt: 2692 Z-score: 2565.7 bits: 484.4 E(32554): 1.4e-136
Smith-Waterman score: 2702; 95.5% identity (96.9% similar) in 425 aa overlap (1-416:1-425)
10 20 30 40 50 60
pF1KB0 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 EVKRAQRQVVAGLNFRITYSIVQTNCSKENFLFLTPDCKSLWNGDTGECTDNAYIDIQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EVKRAQRQVVAGLNFRITYSIVQTNCSKENFLFLTPDCKSLWNGDTGECTDNAYIDIQLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 IDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYVVPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 IDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYVVPW
310 320 330 340 350 360
370 380 390 400 410
pF1KB0 EKKIYPTVNCQPLGMISLMKRPPGFSPFRSSRIGEIKEETTVS---------PPHTSMAP
::::::::::::::::::::::::::::::::::::::::: ::... :
CCDS32 EKKIYPTVNCQPLGMISLMKRPPGFSPFRSSRIGEIKEETTSHLRSCEYKGRPPKAGAEP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB0 AQDEERDSGKEQGHTRRHDWGHEKQRKHNLGHGHKHERDQGHGHQRGHGLGHGHEQQHGL
:...:
CCDS32 ASEREVS
>>CCDS54695.1 KNG1 gene_id:3827|Hs108|chr3 (391 aa)
initn: 1274 init1: 1247 opt: 1247 Z-score: 1193.1 bits: 230.3 E(32554): 3.9e-60
Smith-Waterman score: 2373; 87.1% identity (88.5% similar) in 425 aa overlap (1-416:1-389)
10 20 30 40 50 60
pF1KB0 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 EVKRAQRQVVAGLNFRITYSIVQTNCSKENFLFLTPDCKSLWNGDTGECTDNAYIDIQLR
:::::::: ::::::::::::::::
CCDS54 EVKRAQRQ------------------------------------DTGECTDNAYIDIQLR
190 200
250 260 270 280 290 300
pF1KB0 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFK
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB0 IDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYVVPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYVVPW
270 280 290 300 310 320
370 380 390 400 410
pF1KB0 EKKIYPTVNCQPLGMISLMKRPPGFSPFRSSRIGEIKEETTVS---------PPHTSMAP
::::::::::::::::::::::::::::::::::::::::: ::... :
CCDS54 EKKIYPTVNCQPLGMISLMKRPPGFSPFRSSRIGEIKEETTSHLRSCEYKGRPPKAGAEP
330 340 350 360 370 380
420 430 440 450 460 470
pF1KB0 AQDEERDSGKEQGHTRRHDWGHEKQRKHNLGHGHKHERDQGHGHQRGHGLGHGHEQQHGL
:...:
CCDS54 ASEREVS
390
644 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 17:37:21 2016 done: Sun Nov 6 17:37:21 2016
Total Scan time: 2.170 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]