Result of FASTA (ccds) for
pFN21AA0564
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0564, 1905 aa
1>>>pF1KA0564 1905 - 1905 aa - 1905 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4619+/-0.00118; mu= 19.1188+/- 0.071
mean_var=91.1162+/-18.325, 0's: 0 Z-trim(103.3): 19 B-trim: 0 in 0/51
Lambda= 0.134362
statistics sampled from 7342 (7350) to 7342 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.564), E-opt: 0.2 (0.226), width: 16
Scan time: 6.900
The best scores are: opt bits E(32554)
CCDS41881.1 VWA8 gene_id:23078|Hs108|chr13 (1905) 12570 2448.2 0
CCDS31963.1 VWA8 gene_id:23078|Hs108|chr13 (1039) 6779 1325.6 0
>>CCDS41881.1 VWA8 gene_id:23078|Hs108|chr13 (1905 aa)
initn: 12570 init1: 12570 opt: 12570 Z-score: 13159.0 bits: 2448.2 E(32554): 0
Smith-Waterman score: 12570; 100.0% identity (100.0% similar) in 1905 aa overlap (1-1905:1-1905)
10 20 30 40 50 60
pF1KA0 MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRLLHAGSGADTGDTVNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRLLHAGSGADTGDTVNI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 GDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQDVFLIGPPGPLRRSIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQDVFLIGPPGPLRRSIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 MQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILEGLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILEGLEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 AERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKKELDSWKIVRVSENFRVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKKELDSWKIVRVSENFRVIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 LGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSIGANVSAEKVSQLLSFATTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSIGANVSAEKVSQLLSFATTL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 CSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWLYPYSILLGHEGKMAVEGVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 CSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWLYPYSILLGHEGKMAVEGVLK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 RFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASDR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 FIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 FIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTAR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 DLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 GSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 TMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFTHKLRETQDPTAQSLAASLSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 TMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFTHKLRETQDPTAQSLAASLSTR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 QLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEKNLADATIEINTDDNLEPELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 QLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEKNLADATIEINTDDNLEPELK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 DYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLV
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 GNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPSVKDGLIVYEDSPLVKAVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPSVKDGLIVYEDSPLVKAVKL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 GHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPDFRMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPDFRMI
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 VLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPHSELEMLRQYGPNVPEPILQKLVAAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 VLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPHSELEMLRQYGPNVPEPILQKLVAAFG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 ELRSLADQGIINYPYSTREVVNIVKHLQKFPTEGLSSVVRNVFDFDSYNNDMREILINTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ELRSLADQGIINYPYSTREVVNIVKHLQKFPTEGLSSVVRNVFDFDSYNNDMREILINTL
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 HKYGIPIGAKPTSVQLAKELTLPEQTFMGYWTIGQARSGMQKLLCPVETHHIDIKGPALI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 HKYGIPIGAKPTSVQLAKELTLPEQTFMGYWTIGQARSGMQKLLCPVETHHIDIKGPALI
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 NIQEYPIERHEERSLNFTEECASWRIPLDEINIICDIATSHENEQNTLYVVTCNPASLYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NIQEYPIERHEERSLNFTEECASWRIPLDEINIICDIATSHENEQNTLYVVTCNPASLYF
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 MNMTGKSGFFVDFFDIFPRTANGVWHPFVTVAPLGSPLKGQVVLHEQQSNVILLLDTTGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MNMTGKSGFFVDFFDIFPRTANGVWHPFVTVAPLGSPLKGQVVLHEQQSNVILLLDTTGR
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 ALHRLILPSEKFTSKKPFWWNKEEAETYKMCKEFSHKNWLVFYKEKGNSLTVLDVLEGRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ALHRLILPSEKFTSKKPFWWNKEEAETYKMCKEFSHKNWLVFYKEKGNSLTVLDVLEGRT
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 HTISLPINLKTVFLVAEDKWLLVESKTNQKYLLTKPAHIESEGSGVCQLYVLKEEPPSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 HTISLPINLKTVFLVAEDKWLLVESKTNQKYLLTKPAHIESEGSGVCQLYVLKEEPPSTG
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 FGVTQETEFSIPHKISSDQLSSEHLSSAVEQKIASPNRILSDEKNYATIVVGFPDLMSPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 FGVTQETEFSIPHKISSDQLSSEHLSSAVEQKIASPNRILSDEKNYATIVVGFPDLMSPS
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 EVYSWKRPSSLHKRSGTDTSFYRGKKKRGTPKQSNCVTLLDTNQVVRILPPGEVPLKDIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EVYSWKRPSSLHKRSGTDTSFYRGKKKRGTPKQSNCVTLLDTNQVVRILPPGEVPLKDIY
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA0 PKDVTPPQTSGYIEVTDLQSKKLRYIPIPRSESLSPYTTWLSTISDTDALLAEWDKSGVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PKDVTPPQTSGYIEVTDLQSKKLRYIPIPRSESLSPYTTWLSTISDTDALLAEWDKSGVV
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA0 TVDMGGHIRLWETGLERLQRSLMEWRNMIGQDDRNMQITINRDSGEDVSSPKHGKEDPDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 TVDMGGHIRLWETGLERLQRSLMEWRNMIGQDDRNMQITINRDSGEDVSSPKHGKEDPDN
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA0 MPHVGGNTWAGGTGGRDTAGLGGKGGPYRLDAGHTVYQVSQAEKDAVPEEVKRAAREMGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MPHVGGNTWAGGTGGRDTAGLGGKGGPYRLDAGHTVYQVSQAEKDAVPEEVKRAAREMGQ
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA0 RAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRIILDNLQAKGKERQWLRHQATGELD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRIILDNLQAKGKERQWLRHQATGELD
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KA0 DAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLRLVVDVSGSMYRFNRMDGRLERTME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLRLVVDVSGSMYRFNRMDGRLERTME
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KA0 AVCMVMEAFENYEEKFQYDIVGHSGDGYNIGLVPMNKIPKDNKQRLEILKTMHAHSQFCM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AVCMVMEAFENYEEKFQYDIVGHSGDGYNIGLVPMNKIPKDNKQRLEILKTMHAHSQFCM
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KA0 SGDHTLEGTEHAIKEIVKEEADEYFVIVLSDANLSRYGIHPAKFAQILTRDPQVNAFAIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SGDHTLEGTEHAIKEIVKEEADEYFVIVLSDANLSRYGIHPAKFAQILTRDPQVNAFAIF
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900
pF1KA0 IGSLGDQATRLQRTLPAGRSFVAMDTKDIPQILQQIFTSTMLSSV
:::::::::::::::::::::::::::::::::::::::::::::
CCDS41 IGSLGDQATRLQRTLPAGRSFVAMDTKDIPQILQQIFTSTMLSSV
1870 1880 1890 1900
>>CCDS31963.1 VWA8 gene_id:23078|Hs108|chr13 (1039 aa)
initn: 6779 init1: 6779 opt: 6779 Z-score: 7096.3 bits: 1325.6 E(32554): 0
Smith-Waterman score: 6779; 100.0% identity (100.0% similar) in 1039 aa overlap (1-1039:1-1039)
10 20 30 40 50 60
pF1KA0 MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRLLHAGSGADTGDTVNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRLLHAGSGADTGDTVNI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 GDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQDVFLIGPPGPLRRSIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQDVFLIGPPGPLRRSIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 MQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILEGLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILEGLEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 AERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKKELDSWKIVRVSENFRVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 AERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKKELDSWKIVRVSENFRVIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 LGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSIGANVSAEKVSQLLSFATTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSIGANVSAEKVSQLLSFATTL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 CSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWLYPYSILLGHEGKMAVEGVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWLYPYSILLGHEGKMAVEGVLK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 RFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASDR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 FIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 FIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTAR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 DLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 GSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 TMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFTHKLRETQDPTAQSLAASLSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFTHKLRETQDPTAQSLAASLSTR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 QLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEKNLADATIEINTDDNLEPELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEKNLADATIEINTDDNLEPELK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 DYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLV
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 GNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPSVKDGLIVYEDSPLVKAVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPSVKDGLIVYEDSPLVKAVKL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 GHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPDFRMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPDFRMI
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 VLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPHSELEMLRQYGPNVPEPILQKLVAAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPHSELEMLRQYGPNVPEPILQKLVAAFG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 ELRSLADQGIINYPYSTREVVNIVKHLQKFPTEGLSSVVRNVFDFDSYNNDMREILINTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ELRSLADQGIINYPYSTREVVNIVKHLQKFPTEGLSSVVRNVFDFDSYNNDMREILINTL
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 HKYGIPIGAKPTSVQLAKELTLPEQTFMGYWTIGQARSGMQKLLCPVETHHIDIKGPALI
:::::::::::::::::::
CCDS31 HKYGIPIGAKPTSVQLAKE
1030
1905 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 19:54:53 2016 done: Sun Nov 6 19:54:54 2016
Total Scan time: 6.900 Total Display time: 0.240
Function used was FASTA [36.3.4 Apr, 2011]