hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/smart.HMMs.bin
Sequence file:            /tmp/20080305/iprscan-20080305-16382946/chunk_1/iprscan-20080305-16382946.nocrc
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Query sequence: pF1KB5244
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00353                                                  71.4    1.1e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00353    1/1     107   159 ..     1    61 []    71.4  1.1e-16

Alignments of top-scoring domains:
SM00353: domain 1 of 1, from 107 to 159: score 71.4, E = 1.1e-16
                   *->narERrlrRRekiNeqafdeLrslvPtlpkgggnskKlsKasiLrlA
                      narER  +R++ +N  a+d Lr++vP+      + +KlsK+++LrlA
   pF1KB5244   107    NARER--NRMHGLNA-ALDNLRKVVPCYS----KTQKLSKIETLRLA 146  

                   ieYIrksLqeqlqe<-*
                    +YI + L e l++   
   pF1KB5244   147 KNYI-WALSEILRS    159  

//