hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/Pfam.bin
Sequence file:            /tmp/20090426/iprscan-20090426-07235711/chunk_1/iprscan-20090426-07235711.nocrc
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Query sequence: pF1KE0169
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00036.22.ls EF hand                                         94.6    2.7e-25   3
PF00036.22.fs EF hand                                         92.1    1.5e-24   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00036.22.fs   2/4      64    92 ..     1    29 []    28.2  1.2e-06
PF00036.22.ls   1/3      64    92 ..     1    29 []    30.2  6.6e-06
PF00036.22.fs   3/4     100   128 ..     1    29 []    32.2    1e-07
PF00036.22.ls   2/3     100   128 ..     1    29 []    34.2  4.3e-07
PF00036.22.fs   4/4     148   176 ..     1    29 []    28.3  1.2e-06
PF00036.22.ls   3/3     148   176 ..     1    29 []    30.3  6.4e-06

Alignments of top-scoring domains:
PF00036.22.fs: domain 2 of 4, from 64 to 92: score 28.2, E = 1.2e-06
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                       ++ +F+ fD++gDG+I+f Ef+ al+ +   
   pF1KE0169    64    FAEHVFRTFDANGDGTIDFREFIIALSVT    92   

PF00036.22.ls: domain 1 of 3, from 64 to 92: score 30.2, E = 6.6e-06
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                       ++ +F+ fD++gDG+I+f Ef+ al+ +   
   pF1KE0169    64    FAEHVFRTFDANGDGTIDFREFIIALSVT    92   

PF00036.22.fs: domain 3 of 4, from 100 to 128: score 32.2, E = 1e-07
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      +lk aF+++D Dg+G+Is+ E++++++++   
   pF1KE0169   100    KLKWAFSMYDLDGNGYISKAEMLEIVQAI    128  

PF00036.22.ls: domain 2 of 3, from 100 to 128: score 34.2, E = 4.3e-07
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      +lk aF+++D Dg+G+Is+ E++++++++   
   pF1KE0169   100    KLKWAFSMYDLDGNGYISKAEMLEIVQAI    128  

PF00036.22.fs: domain 4 of 4, from 148 to 176: score 28.3, E = 1.2e-06
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      + +++F+++D+++DGk+s eEf+++ k+    
   pF1KE0169   148    RTEKIFRQMDTNRDGKLSMEEFIRGAKSD    176  

PF00036.22.ls: domain 3 of 3, from 148 to 176: score 30.3, E = 6.4e-06
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      + +++F+++D+++DGk+s eEf+++ k+    
   pF1KE0169   148    RTEKIFRQMDTNRDGKLSMEEFIRGAKSD    176  

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