hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/Pfam.bin
Sequence file:            /tmp/20080307/iprscan-20080307-03591234/chunk_1/iprscan-20080307-03591234.nocrc
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Query sequence: pF1KB7515
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00170.11.fs bZIP transcription factor                       51.4    6.1e-14   1
PF00170.11.ls bZIP transcription factor                       53.4    7.1e-13   1
PF07716.5.fs Basic region leucine zipper                     43.3    7.5e-11   1
PF07716.5.ls Basic region leucine zipper                     45.3    1.9e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00170.11.fs   1/1      33    97 ..     1    65 []    51.4  6.1e-14
PF07716.5.fs   1/1      33    87 ..     1    57 []    43.3  7.5e-11
PF00170.11.ls   1/1      33    97 ..     1    65 []    53.4  7.1e-13
PF07716.5.ls   1/1      33    87 ..     1    57 []    45.3  1.9e-10

Alignments of top-scoring domains:
PF00170.11.fs: domain 1 of 1, from 33 to 97: score 51.4, E = 6.1e-14
                   *->ekelKrerRkqkNReAArrsRlRKqaeieeLeekveeLeaeNkaLrk
                      e ++++ rR++kNR+AA+rsR++  ++ ++L e+ e+Le eN++Lr 
   pF1KB7515    33    EDDDRKVRRREKNRVAAQRSRKKQTQKADKLHEEYESLEQENTMLRR 79   

                   elerLkkevakLksenee<-*
                   e+ +L++e + L+  ++e   
   pF1KB7515    80 EIGKLTEELKHLTEALKE    97   

PF07716.5.fs: domain 1 of 1, from 33 to 87: score 43.3, E = 7.5e-11
                   *->kddeyrdrRrlrNneAAkrsReKkKqreeeleervkeLeeeNaqLLk
                      +dd++++rRr++N++AA+rsR+K  q+ ++l e+ + Le+eN  L  
   pF1KB7515    33    EDDDRKVRRREKNRVAAQRSRKKQTQKADKLHEEYESLEQENTML-- 77   

                   rqkveqLekE<-*
                   r+++  L+ E   
   pF1KB7515    78 RREIGKLTEE    87   

PF00170.11.ls: domain 1 of 1, from 33 to 97: score 53.4, E = 7.1e-13
                   *->ekelKrerRkqkNReAArrsRlRKqaeieeLeekveeLeaeNkaLrk
                      e ++++ rR++kNR+AA+rsR++  ++ ++L e+ e+Le eN++Lr 
   pF1KB7515    33    EDDDRKVRRREKNRVAAQRSRKKQTQKADKLHEEYESLEQENTMLRR 79   

                   elerLkkevakLksenee<-*
                   e+ +L++e + L+  ++e   
   pF1KB7515    80 EIGKLTEELKHLTEALKE    97   

PF07716.5.ls: domain 1 of 1, from 33 to 87: score 45.3, E = 1.9e-10
                   *->kddeyrdrRrlrNneAAkrsReKkKqreeeleervkeLeeeNaqLLk
                      +dd++++rRr++N++AA+rsR+K  q+ ++l e+ + Le+eN  L  
   pF1KB7515    33    EDDDRKVRRREKNRVAAQRSRKKQTQKADKLHEEYESLEQENTML-- 77   

                   rqkveqLekE<-*
                   r+++  L+ E   
   pF1KB7515    78 RREIGKLTEE    87   

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