(Linear) (Six-base) MAPSORT of: KIEE4141.seq Check: 8605 from: 1 to: 1674
KIEE4141.orf
With 182 enzymes: SgfI *
July 3, 2012 18:38 ..
AcuI CTGAAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 103 113 1555 1674
Size: 103 10 1442 119
Fragments arranged by size:
1442 119 103 10
AflIII A'CryG_T
Cuts at: 0 946 1674
Size: 946 728
AlfI GCAnnnnnnTGCnnnnnnnnnn_nn'
Cuts at: 0 449 1674
Size: 449 1225
ApoI r'AATT_y
Cuts at: 0 217 439 479 520 1674
Size: 217 222 40 41 1154
Fragments arranged by size:
1154 222 217 41 40
BamHI G'GATC_C
Cuts at: 0 876 1674
Size: 876 798
BanI G'GyrC_C
Cuts at: 0 1504 1674
Size: 1504 170
BanII G_rGCy'C
Cuts at: 0 1143 1674
Size: 1143 531
BcgI CGAnnnnnnTGCnnnnnnnnnn_nn'
Cuts at: 0 632 666 1674
Size: 632 34 1008
Fragments arranged by size:
1008 632 34
BciVI GTATCCnnnnn_n'
Cuts at: 0 1537 1674
Size: 1537 137
BfrBI ATG'CAT
Cuts at: 0 73 283 789 1674
Size: 73 210 506 885
Fragments arranged by size:
885 506 210 73
BglI GCCn_nnn'nGGC
Cuts at: 0 1274 1674
Size: 1274 400
BglII A'GATC_T
Cuts at: 0 1596 1674
Size: 1596 78
BmrI ACTGGGnnnn_n'
Cuts at: 0 983 1625 1674
Size: 983 642 49
Fragments arranged by size:
983 642 49
BpmI CTGGAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 1127 1335 1559 1674
Size: 1127 208 224 115
Fragments arranged by size:
1127 224 208 115
BpuEI CTTGAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 352 1674
Size: 352 1322
BsaI GGTCTCn'nnnn_
Cuts at: 0 1649 1674
Size: 1649 25
BsaBI GATnn'nnATC
Cuts at: 0 689 1595 1674
Size: 689 906 79
Fragments arranged by size:
906 689 79
BsgI GTGCAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 1109 1275 1674
Size: 1109 166 399
Fragments arranged by size:
1109 399 166
BsiHKAI G_wGCw'C
Cuts at: 0 1381 1674
Size: 1381 293
BsmI GAATG_Cn'
Cuts at: 0 73 428 655 1441 1674
Size: 73 355 227 786 233
Fragments arranged by size:
786 355 233 227 73
Bsp1286I G_dGCh'C
Cuts at: 0 1143 1381 1674
Size: 1143 238 293
Fragments arranged by size:
1143 293 238
BspHI T'CATG_A
Cuts at: 0 627 1514 1674
Size: 627 887 160
Fragments arranged by size:
887 627 160
BsrBI CCG'CTC
Cuts at: 0 381 758 1674
Size: 381 377 916
Fragments arranged by size:
916 381 377
BsrDI GCAATG_nn'
Cuts at: 0 197 1674
Size: 197 1477
BstYI r'GATC_y
Cuts at: 0 342 690 752 876 1019 1596 1674
Size: 342 348 62 124 143 577 78
Fragments arranged by size:
577 348 342 143 124 78 62
Bsu36I CC'TnA_GG
Cuts at: 0 714 1674
Size: 714 960
DraI TTT'AAA
Cuts at: 0 222 1175 1674
Size: 222 953 499
Fragments arranged by size:
953 499 222
DraIII CAC_nnn'GTG
Cuts at: 0 1016 1674
Size: 1016 658
EaeI y'GGCC_r
Cuts at: 0 1266 1674
Size: 1266 408
EarI CTCTTCn'nnn_
Cuts at: 0 122 1145 1674
Size: 122 1023 529
Fragments arranged by size:
1023 529 122
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 103 113 1127 1335 1555 1559 1674
Size: 103 10 1014 208 220 4 115
Fragments arranged by size:
1014 220 208 115 103 10 4
EcoNI CCTnn'n_nnAGG
Cuts at: 0 331 1674
Size: 331 1343
EcoO109I rG'GnC_Cy
Cuts at: 0 955 1674
Size: 955 719
EcoRI G'AATT_C
Cuts at: 0 479 1674
Size: 479 1195
EcoRV GAT'ATC
Cuts at: 0 1326 1674
Size: 1326 348
FalI AAGnnnnnCTTnnnnnnnn_nnnnn'
Cuts at: 0 567 1674
Size: 567 1107
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'
Cuts at: 0 454 486 1674
Size: 454 32 1188
Fragments arranged by size:
1188 454 32
MscI TGG'CCA
Cuts at: 0 1268 1674
Size: 1268 406
MslI CAynn'nnrTG
Cuts at: 0 1652 1674
Size: 1652 22
MspA1I CmG'CkG
Cuts at: 0 202 340 1674
Size: 202 138 1334
Fragments arranged by size:
1334 202 138
NdeI CA'TA_TG
Cuts at: 0 871 1674
Size: 871 803
NsiI A_TGCA'T
Cuts at: 0 75 285 791 1674
Size: 75 210 506 883
Fragments arranged by size:
883 506 210 75
NspI r_CATG'y
Cuts at: 0 950 1674
Size: 950 724
PciI A'CATG_T
Cuts at: 0 946 1674
Size: 946 728
PflMI CCAn_nnn'nTGG
Cuts at: 0 1369 1674
Size: 1369 305
PpiI GAACnnnnnCTCnnnnnnnn_nnnnn'
Cuts at: 0 1144 1176 1674
Size: 1144 32 498
Fragments arranged by size:
1144 498 32
PpuMI rG'GwC_Cy
Cuts at: 0 955 1674
Size: 955 719
PvuII CAG'CTG
Cuts at: 0 202 1674
Size: 202 1472
SfcI C'TryA_G
Cuts at: 0 349 981 1278 1674
Size: 349 632 297 396
Fragments arranged by size:
632 396 349 297
SmlI C'TyrA_G
Cuts at: 0 331 1674
Size: 331 1343
StuI AGG'CCT
Cuts at: 0 269 719 1674
Size: 269 450 955
Fragments arranged by size:
955 450 269
StyI C'CwwG_G
Cuts at: 0 1097 1674
Size: 1097 577
TaqII GACCGAnnnnnnnnn_nn'
Cuts at: 0 1090 1640 1674
Size: 1090 550 34
Fragments arranged by size:
1090 550 34
TatI w'GTAC_w
Cuts at: 0 698 1674
Size: 698 976
TstI CACnnnnnnTCCnnnnnnn_nnnnn'
Cuts at: 0 1338 1370 1674
Size: 1338 32 304
Fragments arranged by size:
1338 304 32
XcmI CCAnnnn_n'nnnnTGG
Cuts at: 0 614 1674
Size: 614 1060
XmnI GAAnn'nnTTC
Cuts at: 0 521 545 1674
Size: 521 24 1129
Fragments arranged by size:
1129 521 24
Enzymes that do cut:
AcuI AflIII AlfI ApoI BamHI BanI BanII BcgI
BciVI BfrBI BglI BglII BmrI BpmI BpuEI BsaI
BsaBI BsgI BsiHKAI BsmI Bsp1286I BspHI BsrBI BsrDI
BstYI Bsu36I DraI DraIII EaeI EarI Eco57MI EcoNI
EcoO109I EcoRI EcoRV FalI Hin4I MscI MslI MspA1I
NdeI NsiI NspI PciI PflMI PpiI PpuMI PvuII
SfcI SmlI StuI StyI TaqII TatI TstI XcmI
XmnI
Enzymes that do not cut:
AarI AatII AccI Acc65I AclI AfeI AflII AgeI
AhdI AleI AloI AlwNI ApaI ApaLI AscI AseI
AsiSI AvaI AvrII BaeI BbeI BbsI BbvCI BclI
BlpI Bme1580I BmgBI BmtI BplI Bpu10I BsaAI BsaHI
BsaWI BsaXI BseRI BseYI BsiEI BsiWI BsmBI BspEI
BspMI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII
BstXI BstZ17I BtgI BtgZI BtsI ClaI CspCI DrdI
EagI EciI EcoICRI FseI FspI FspAI HaeII HincII
HindIII HpaI KasI KpnI MfeI MluI MmeI NaeI
NarI NcoI NgoMIV NheI NotI NruI PacI PasI
PfoI PmeI PmlI PshAI PsiI PspOMI PspXI PsrI
PstI PvuI RsrII SacI SacII SalI SanDI SapI
SbfI ScaI SexAI SfiI SfoI SgfI SgrAI SmaI
SnaBI SpeI SphI SrfI SspI SwaI Tth111I XbaI
XhoI XmaI ZraI