(Linear) (Six-base) MAPSORT of: KIAA1844.seq Check: 566 from: 1 to: 1941 KIAA1844.orf With 182 enzymes: SgfI * March 2, 2010 14:24 .. AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 356 1004 1054 1528 1671 1941 Size: 356 648 50 474 143 270 Fragments arranged by size: 648 474 356 270 143 50 AfeI AGC'GCT Cuts at: 0 1549 1941 Size: 1549 392 AflII C'TTAA_G Cuts at: 0 82 1941 Size: 82 1859 AflIII A'CryG_T Cuts at: 0 1654 1707 1790 1941 Size: 1654 53 83 151 Fragments arranged by size: 1654 151 83 53 AleI CACnn'nnGTG Cuts at: 0 1688 1941 Size: 1688 253 AlwNI CAG_nnn'CTG Cuts at: 0 1177 1941 Size: 1177 764 ApoI r'AATT_y Cuts at: 0 297 330 1635 1799 1818 1847 1926 1941 Size: 297 33 1305 164 19 29 79 15 Fragments arranged by size: 1305 297 164 79 33 29 19 15 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 0 1610 1643 1941 Size: 1610 33 298 Fragments arranged by size: 1610 298 33 BbsI GAAGACnn'nnnn_ Cuts at: 0 620 965 1534 1941 Size: 620 345 569 407 Fragments arranged by size: 620 569 407 345 BciVI GTATCCnnnnn_n' Cuts at: 0 1868 1941 Size: 1868 73 BclI T'GATC_A Cuts at: 0 117 816 1403 1941 Size: 117 699 587 538 Fragments arranged by size: 699 587 538 117 BfrBI ATG'CAT Cuts at: 0 1609 1941 Size: 1609 332 BglII A'GATC_T Cuts at: 0 181 1825 1941 Size: 181 1644 116 Fragments arranged by size: 1644 181 116 BlpI GC'TnA_GC Cuts at: 0 1271 1941 Size: 1271 670 BmgBI CAC'GTC Cuts at: 0 971 1941 Size: 971 970 BmrI ACTGGGnnnn_n' Cuts at: 0 101 1941 Size: 101 1840 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1430 1941 Size: 1430 511 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1247 1536 1941 Size: 1247 289 405 Fragments arranged by size: 1247 405 289 BsaAI yAC'GTr Cuts at: 0 1655 1941 Size: 1655 286 BsaHI Gr'CG_yC Cuts at: 0 143 1941 Size: 143 1798 BsaWI w'CCGG_w Cuts at: 0 50 1941 Size: 50 1891 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 1403 1523 1941 Size: 1403 120 418 Fragments arranged by size: 1403 418 120 BseYI C'CCAG_C Cuts at: 0 1289 1941 Size: 1289 652 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 881 986 1655 1941 Size: 881 105 669 286 Fragments arranged by size: 881 669 286 105 BsiEI CG_ry'CG Cuts at: 0 51 1941 Size: 51 1890 BsiHKAI G_wGCw'C Cuts at: 0 318 1941 Size: 318 1623 BsmI GAATG_Cn' Cuts at: 0 621 1941 Size: 621 1320 BsmBI CGTCTCn'nnnn_ Cuts at: 0 134 1256 1941 Size: 134 1122 685 Fragments arranged by size: 1122 685 134 Bsp1286I G_dGCh'C Cuts at: 0 318 1941 Size: 318 1623 BspHI T'CATG_A Cuts at: 0 1518 1941 Size: 1518 423 BstAPI GCAn_nnn'nTGC Cuts at: 0 1615 1732 1941 Size: 1615 117 209 Fragments arranged by size: 1615 209 117 BstXI CCAn_nnnn'nTGG Cuts at: 0 485 609 1941 Size: 485 124 1332 Fragments arranged by size: 1332 485 124 BstYI r'GATC_y Cuts at: 0 150 181 1825 1941 Size: 150 31 1644 116 Fragments arranged by size: 1644 150 116 31 BtsI GCAGTG_nn' Cuts at: 0 1192 1941 Size: 1192 749 EarI CTCTTCn'nnn_ Cuts at: 0 91 323 426 558 1941 Size: 91 232 103 132 1383 Fragments arranged by size: 1383 232 132 103 91 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 356 1004 1054 1430 1528 1671 1941 Size: 356 648 50 376 98 143 270 Fragments arranged by size: 648 376 356 270 143 98 50 EcoO109I rG'GnC_Cy Cuts at: 0 1074 1941 Size: 1074 867 EcoRI G'AATT_C Cuts at: 0 1635 1926 1941 Size: 1635 291 15 Fragments arranged by size: 1635 291 15 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 386 505 1941 Size: 386 119 1436 Fragments arranged by size: 1436 386 119 HaeII r_GCGC'y Cuts at: 0 1551 1941 Size: 1551 390 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 388 420 1318 1350 1395 1427 1817 1849 Size: 388 32 898 32 45 32 390 32 Cuts at: 1849 1941 Size: 92 Fragments arranged by size: 898 390 388 92 45 32 32 32 32 HincII GTy'rAC Cuts at: 0 534 1941 Size: 534 1407 MfeI C'AATT_G Cuts at: 0 444 1093 1941 Size: 444 649 848 Fragments arranged by size: 848 649 444 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 790 1033 1941 Size: 790 243 908 Fragments arranged by size: 908 790 243 MslI CAynn'nnrTG Cuts at: 0 125 626 1688 1941 Size: 125 501 1062 253 Fragments arranged by size: 1062 501 253 125 MspA1I CmG'CkG Cuts at: 0 1024 1177 1941 Size: 1024 153 764 Fragments arranged by size: 1024 764 153 NdeI CA'TA_TG Cuts at: 0 1347 1941 Size: 1347 594 NsiI A_TGCA'T Cuts at: 0 1611 1941 Size: 1611 330 NspI r_CATG'y Cuts at: 0 1794 1941 Size: 1794 147 PciI A'CATG_T Cuts at: 0 1790 1941 Size: 1790 151 PflMI CCAn_nnn'nTGG Cuts at: 0 1576 1941 Size: 1576 365 PmlI CAC'GTG Cuts at: 0 1655 1941 Size: 1655 286 PpuMI rG'GwC_Cy Cuts at: 0 1074 1941 Size: 1074 867 PshAI GACnn'nnGTC Cuts at: 0 1467 1941 Size: 1467 474 PstI C_TGCA'G Cuts at: 0 396 1124 1199 1728 1941 Size: 396 728 75 529 213 Fragments arranged by size: 728 529 396 213 75 PvuII CAG'CTG Cuts at: 0 1177 1941 Size: 1177 764 SapI GCTCTTCn'nnn_ Cuts at: 0 323 426 1941 Size: 323 103 1515 Fragments arranged by size: 1515 323 103 ScaI AGT'ACT Cuts at: 0 436 1410 1443 1941 Size: 436 974 33 498 Fragments arranged by size: 974 498 436 33 SexAI A'CCwGG_T Cuts at: 0 1575 1941 Size: 1575 366 SfcI C'TryA_G Cuts at: 0 392 693 808 1120 1195 1724 1941 Size: 392 301 115 312 75 529 217 Fragments arranged by size: 529 392 312 301 217 115 75 SmlI C'TyrA_G Cuts at: 0 82 1262 1551 1941 Size: 82 1180 289 390 Fragments arranged by size: 1180 390 289 82 SpeI A'CTAG_T Cuts at: 0 589 1941 Size: 589 1352 SspI AAT'ATT Cuts at: 0 657 1941 Size: 657 1284 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 894 1941 Size: 894 1047 TatI w'GTAC_w Cuts at: 0 434 735 1408 1441 1804 1941 Size: 434 301 673 33 363 137 Fragments arranged by size: 673 434 363 301 137 33 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 753 1941 Size: 753 1188 XmnI GAAnn'nnTTC Cuts at: 0 1930 1941 Size: 1930 11 Enzymes that do cut: AcuI AfeI AflII AflIII AleI AlwNI ApoI BaeI BbsI BciVI BclI BfrBI BglII BlpI BmgBI BmrI BpmI BpuEI BsaAI BsaHI BsaWI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspHI BstAPI BstXI BstYI BtsI EarI Eco57MI EcoO109I EcoRI FalI HaeII Hin4I HincII MfeI MmeI MslI MspA1I NdeI NsiI NspI PciI PflMI PmlI PpuMI PshAI PstI PvuII SapI ScaI SexAI SfcI SmlI SpeI SspI TaqII TatI XcmI XmnI Enzymes that do not cut: AarI AatII AccI Acc65I AclI AgeI AhdI AlfI AloI ApaI ApaLI AscI AseI AsiSI AvaI AvrII BamHI BanI BanII BbeI BbvCI BcgI BglI Bme1580I BmtI BplI Bpu10I BsaI BsaBI BsaXI BsiWI BspEI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstBI BstEII BstZ17I Bsu36I BtgI BtgZI ClaI CspCI DraI DraIII DrdI EaeI EagI EciI EcoICRI EcoNI EcoRV FseI FspI FspAI HindIII HpaI KasI KpnI MluI MscI NaeI NarI NcoI NgoMIV NheI NotI NruI PacI PasI PfoI PmeI PpiI PsiI PspOMI PspXI PsrI PvuI RsrII SacI SacII SalI SanDI SbfI SfiI SfoI SgfI SgrAI SmaI SnaBI SphI SrfI StuI StyI SwaI TstI Tth111I XbaI XhoI XmaI ZraI