Result of FASTA (ccds) for
pF1KSDF0201
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDF0201, 703 aa
1>>>pF1KSDF0201 703 - 703 aa - 703 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.8706+/-0.00135; mu= -2.8796+/- 0.082
mean_var=691.8839+/-145.956, 0's: 0 Z-trim(115.6): 207 B-trim: 414 in 1/51
Lambda= 0.048759
statistics sampled from 16008 (16209) to 16008 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.74), E-opt: 0.2 (0.498), width: 16
Scan time: 5.020
The best scores are: opt bits E(32554)
CCDS403.1 COL8A2 gene_id:1296|Hs108|chr1 ( 703) 5227 383.2 7.2e-106
CCDS72756.1 COL8A2 gene_id:1296|Hs108|chr1 ( 638) 4789 352.3 1.3e-96
CCDS2934.1 COL8A1 gene_id:1295|Hs108|chr3 ( 744) 2644 201.5 3.7e-51
CCDS5105.1 COL10A1 gene_id:1300|Hs108|chr6 ( 680) 2503 191.5 3.4e-48
CCDS14543.1 COL4A5 gene_id:1287|Hs108|chrX (1685) 1599 128.5 8e-29
CCDS35366.1 COL4A5 gene_id:1287|Hs108|chrX (1691) 1599 128.5 8.1e-29
CCDS6982.1 COL5A1 gene_id:1289|Hs108|chr9 (1838) 1588 127.8 1.4e-28
CCDS75932.1 COL5A1 gene_id:1289|Hs108|chr9 (1838) 1588 127.8 1.4e-28
CCDS780.2 COL11A1 gene_id:1301|Hs108|chr1 (1690) 1531 123.7 2.2e-27
CCDS53348.1 COL11A1 gene_id:1301|Hs108|chr1 (1767) 1531 123.7 2.3e-27
CCDS778.1 COL11A1 gene_id:1301|Hs108|chr1 (1806) 1531 123.8 2.3e-27
CCDS33350.1 COL5A2 gene_id:1290|Hs108|chr2 (1499) 1525 123.2 2.8e-27
CCDS8759.1 COL2A1 gene_id:1280|Hs108|chr12 (1418) 1519 122.8 3.6e-27
CCDS41778.1 COL2A1 gene_id:1280|Hs108|chr12 (1487) 1519 122.8 3.7e-27
CCDS6376.1 COL22A1 gene_id:169044|Hs108|chr8 (1626) 1503 121.7 8.5e-27
CCDS12222.1 COL5A3 gene_id:50509|Hs108|chr19 (1745) 1476 119.9 3.3e-26
CCDS9511.1 COL4A1 gene_id:1282|Hs108|chr13 (1669) 1472 119.6 3.9e-26
CCDS41907.1 COL4A2 gene_id:1284|Hs108|chr13 (1712) 1455 118.4 9.1e-26
CCDS47447.1 COL9A1 gene_id:1297|Hs108|chr6 ( 678) 1436 116.5 1.3e-25
CCDS450.1 COL9A2 gene_id:1298|Hs108|chr1 ( 689) 1434 116.3 1.5e-25
CCDS4971.1 COL9A1 gene_id:1297|Hs108|chr6 ( 921) 1436 116.7 1.6e-25
CCDS42829.1 COL4A3 gene_id:1285|Hs108|chr2 (1670) 1426 116.3 3.7e-25
CCDS6802.1 COL27A1 gene_id:85301|Hs108|chr9 (1860) 1410 115.3 8.6e-25
CCDS76010.1 COL4A6 gene_id:1288|Hs108|chrX (1707) 1393 114.0 1.9e-24
CCDS41297.1 COL16A1 gene_id:1307|Hs108|chr1 (1604) 1364 111.9 7.4e-24
CCDS4970.1 COL19A1 gene_id:1310|Hs108|chr6 (1142) 1352 110.9 1.1e-23
CCDS41353.1 COL24A1 gene_id:255631|Hs108|chr1 (1714) 1344 110.6 2e-23
CCDS2773.1 COL7A1 gene_id:1294|Hs108|chr3 (2944) 1349 111.2 2.2e-23
CCDS42828.1 COL4A4 gene_id:1286|Hs108|chr2 (1690) 1342 110.4 2.2e-23
CCDS76649.1 COL4A1 gene_id:1282|Hs108|chr13 ( 519) 1327 108.6 2.3e-23
CCDS44424.2 COL13A1 gene_id:1305|Hs108|chr10 ( 695) 1330 109.0 2.4e-23
CCDS44425.2 COL13A1 gene_id:1305|Hs108|chr10 ( 686) 1307 107.4 7.3e-23
CCDS13505.1 COL9A3 gene_id:1299|Hs108|chr20 ( 684) 1283 105.7 2.3e-22
CCDS44419.1 COL13A1 gene_id:1305|Hs108|chr10 ( 717) 1269 104.8 4.8e-22
CCDS76008.1 COL4A6 gene_id:1288|Hs108|chrX (1633) 1261 104.7 1.1e-21
CCDS76009.1 COL4A6 gene_id:1288|Hs108|chrX (1666) 1261 104.7 1.1e-21
CCDS14542.1 COL4A6 gene_id:1288|Hs108|chrX (1690) 1261 104.7 1.2e-21
CCDS14541.1 COL4A6 gene_id:1288|Hs108|chrX (1691) 1261 104.7 1.2e-21
CCDS58922.1 COL25A1 gene_id:84570|Hs108|chr4 ( 645) 1217 101.0 5.7e-21
CCDS44427.2 COL13A1 gene_id:1305|Hs108|chr10 ( 645) 1209 100.5 8.4e-21
CCDS44428.2 COL13A1 gene_id:1305|Hs108|chr10 ( 610) 1175 98.1 4.3e-20
CCDS44423.2 COL13A1 gene_id:1305|Hs108|chr10 ( 668) 1169 97.7 6e-20
CCDS55025.1 COL21A1 gene_id:81578|Hs108|chr6 ( 957) 1065 90.6 1.2e-17
CCDS83099.1 COL21A1 gene_id:81578|Hs108|chr6 ( 954) 1053 89.7 2.1e-17
CCDS34682.1 COL1A2 gene_id:1278|Hs108|chr7 (1366) 1024 87.9 1.1e-16
CCDS42971.1 COL18A1 gene_id:80781|Hs108|chr21 (1339) 1004 86.5 2.8e-16
CCDS42972.1 COL18A1 gene_id:80781|Hs108|chr21 (1519) 1004 86.6 3e-16
CCDS77643.1 COL18A1 gene_id:80781|Hs108|chr21 (1754) 1004 86.7 3.3e-16
CCDS43553.1 COL28A1 gene_id:340267|Hs108|chr7 (1125) 997 85.9 3.6e-16
CCDS43452.1 COL11A2 gene_id:1302|Hs108|chr6 (1650) 959 83.5 2.8e-15
>>CCDS403.1 COL8A2 gene_id:1296|Hs108|chr1 (703 aa)
initn: 5227 init1: 5227 opt: 5227 Z-score: 2014.1 bits: 383.2 E(32554): 7.2e-106
Smith-Waterman score: 5227; 100.0% identity (100.0% similar) in 703 aa overlap (1-703:1-703)
10 20 30 40 50 60
pF1KSD MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD GQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 GQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 RMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD PGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 PGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD LDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 LDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD PGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 PGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD GLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 GLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD GPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 GPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD GLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 GLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 IAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD GHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 GHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQAS
610 620 630 640 650 660
670 680 690 700
pF1KSD GGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
:::::::::::::::::::::::::::::::::::::::::::
CCDS40 GGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
670 680 690 700
>>CCDS72756.1 COL8A2 gene_id:1296|Hs108|chr1 (638 aa)
initn: 4789 init1: 4789 opt: 4789 Z-score: 1848.0 bits: 352.3 E(32554): 1.3e-96
Smith-Waterman score: 4789; 100.0% identity (100.0% similar) in 638 aa overlap (66-703:1-638)
40 50 60 70 80 90
pF1KSD AGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPG
::::::::::::::::::::::::::::::
CCDS72 MPLPLLPMDLKGEPGPPGKPGPRGPPGPPG
10 20 30
100 110 120 130 140 150
pF1KSD FPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 FPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLR
40 50 60 70 80 90
160 170 180 190 200 210
pF1KSD GPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGL
100 110 120 130 140 150
220 230 240 250 260 270
pF1KSD PGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 PGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPP
160 170 180 190 200 210
280 290 300 310 320 330
pF1KSD GVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGL
220 230 240 250 260 270
340 350 360 370 380 390
pF1KSD LGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 LGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGD
280 290 300 310 320 330
400 410 420 430 440 450
pF1KSD QGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 QGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ
340 350 360 370 380 390
460 470 480 490 500 510
pF1KSD PGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 PGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSP
400 410 420 430 440 450
520 530 540 550 560 570
pF1KSD GITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATP
460 470 480 490 500 510
580 590 600 610 620 630
pF1KSD AFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 AFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWV
520 530 540 550 560 570
640 650 660 670 680 690
pF1KSD ALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 ALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSF
580 590 600 610 620 630
700
pF1KSD SGFLLCPT
::::::::
CCDS72 SGFLLCPT
>>CCDS2934.1 COL8A1 gene_id:1295|Hs108|chr3 (744 aa)
initn: 5240 init1: 2003 opt: 2644 Z-score: 1031.9 bits: 201.5 E(32554): 3.7e-51
Smith-Waterman score: 2644; 57.2% identity (71.1% similar) in 671 aa overlap (42-702:88-743)
20 30 40 50 60 70
pF1KSD LLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGP-VGPPFREGKGQYLEMPLPL
.:.. .: .: .: ::. :.::
CCDS29 VPHMPLAKDGLAMGKEMPHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKKGK--EIPLA-
60 70 80 90 100 110
80 90 100 110 120 130
pF1KSD LPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGL
.:.:: :: :.:::::::::::.::. : ::..:.::: : :: .:: : ::.
CCDS29 ---SLRGEQGPRGEPGPRGPPGPPGLPGH---GIPGIKGKPGPQGYPG---VGKPGMPGM
120 130 140 150 160
140 150 160 170 180 190
pF1KSD PGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEP
::: : :.:: .:: : .:. : : ::: : ::: :. ::::. :.:: :: .:.
CCDS29 PGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDR
170 180 190 200 210 220
200 210 220 230 240 250
pF1KSD GPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGD
::.: ::: : :: :::.: :.:: ::. : : :::: : :.::::. :.:: :
CCDS29 GPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGP
230 240 250 260 270 280
260 270 280 290 300
pF1KSD KGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGE---PGTRGPP
:. : :: :::.: :. : .::::. :.: :: :.:: : :.::: :: :::
CCDS29 LGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPP
290 300 310 320 330 340
310 320 330 340 350 360
pF1KSD GLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAG
:: : : : ::.:::::::: .:::: :: ::: : : :: :: : : ::.:: :
CCDS29 GL--P-GIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMG
350 360 370 380 390 400
370 380 390 400 410 420
pF1KSD LPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKG
:: : ::::::.: :: : :: .:. : .:. :::: :: : :: .: ::: ::::
CCDS29 PPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKG
410 420 430 440 450 460
430 440 450 460 470 480
pF1KSD EPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPG
: : : :: ::: : :: ::. :.::. ::.:: ::::. ::.::::: :.:: :::::
CCDS29 EAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPG
470 480 490 500 510 520
490 500 510 520 530 540
pF1KSD LPGPPGEGRAGEPGTAGPTGPPGVPGSPGITG-P--PGPPGPPGPPGAPGAFDETGIA-G
:::::: :.::.:: :::: ::. : : : ::::::::::: :... : :
CCDS29 LPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQG
530 540 550 560 570 580
550 560 570 580 590 600
pF1KSD LHLPN-G-GVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNG
.::. : :..:. .. . : . :. ::::: ::.::: : ::::.. ::::
CCDS29 EYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNG
590 600 610 620 630 640
610 620 630 640 650 660
pF1KSD HSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASG
...::: :::::: : :::::::::: :: ::::::.::: :. :::::::::.::::::
CCDS29 RQNYNPQTGIFTCEVPGVYYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASG
650 660 670 680 690 700
670 680 690 700
pF1KSD GAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
.::: :::.:.:..::::.:: :::. .:.::::::.:: :
CCDS29 SAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLLYPM
710 720 730 740
>>CCDS5105.1 COL10A1 gene_id:1300|Hs108|chr6 (680 aa)
initn: 3592 init1: 1912 opt: 2503 Z-score: 978.7 bits: 191.5 E(32554): 3.4e-48
Smith-Waterman score: 2503; 55.5% identity (69.9% similar) in 632 aa overlap (76-702:59-679)
50 60 70 80 90 100
pF1KSD PMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKP
.: ::::: :::: ::: : :::::.:.:
CCDS51 TGIKGPLPNTKTQFFIPYTIKSKGIAVRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSP
30 40 50 60 70 80
110 120 130 140 150 160
pF1KSD GLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPG
::.:.:: :::: : .:: : :::::: : : : .:. : : : ::::::::.::
CCDS51 GLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPG
90 100 110 120 130 140
170 180 190 200 210 220
pF1KSD PSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAP
:.::..::::: :: : :: .: :: .: :: :: : ::. : : :: :: : :
CCDS51 PAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQ
150 160 170 180 190 200
230 240 250 260 270 280
pF1KSD GPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGA
:: : :: :.:: : .:.:: :: ::. : :: :: : :: :: : : .:.: :::
CCDS51 GPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGA
210 220 230 240 250 260
290 300 310 320 330 340
pF1KSD AGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGED
:: :: : :.:: ::. : : :: :.: ::::: ::.:::::.:: : .:: :
CCDS51 AGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPA
270 280 290 300 310 320
350 360 370 380 390 400
pF1KSD GEPGEQGPQGLGGPPGL--P-GSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLA
: ::. : :: :::: : : :.:: .: ::::::.::.:: : :: .:..: :
CCDS51 GLPGK--P-GLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSD
330 340 350 360 370 380
410 420 430 440 450 460
pF1KSD GKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPS
:::: ::. :: : .: :: ::::.:: : :: :: .: : :: : :. : ::
CCDS51 GKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAP
390 400 410 420 430 440
470 480 490 500 510 520
pF1KSD GIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPG
:::: .:: :: : :.:: ::.:: ::::: . . : ::::::: :: : .: ::
CCDS51 GIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPG
450 460 470 480 490 500
530 540 550 560 570 580
pF1KSD PPGPPGPPGAPGAFDETGIAGLHLPNGGVE-GAVLGKGGKPQFGLGE-LSAHATPAFTAV
:::::::: :: .. .:.: .. : . .: : . .. ... . :::..
CCDS51 LPGPPGPPGPPGQ----AV----MPEGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVI
510 520 530 540 550
590 600 610 620 630 640
pF1KSD LTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKN
:.. .:: : :. ::. ::: .. :.: :::::: . :.:::.::::::::.:::.::::
CCDS51 LSKAYPAIGTPIPFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHVHVKGTHVWVGLYKN
560 570 580 590 600 610
650 660 670 680 690 700
pF1KSD NVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLL
..:. :::::: :::::::::.:...: :::::.:.:. ..:::::.::.::::::::.
CCDS51 GTPVMYTYDEYTKGYLDQASGSAIIDLTENDQVWLQLPNAESNGLYSSEYVHSSFSGFLV
620 630 640 650 660 670
pF1KSD CPT
:
CCDS51 APM
680
>>CCDS14543.1 COL4A5 gene_id:1287|Hs108|chrX (1685 aa)
initn: 1235 init1: 764 opt: 1599 Z-score: 630.9 bits: 128.5 E(32554): 8e-29
Smith-Waterman score: 1786; 48.7% identity (58.8% similar) in 612 aa overlap (31-591:647-1243)
10 20 30 40 50 60
pF1KSD MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGK
: : : :: . : : : :.:
CCDS14 IGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGD
620 630 640 650 660 670
70 80 90 100 110
pF1KSD -------GQYLEMPLPLLPMDLKGEPGPPGK--PGPRGPPGPPGFPGKPGM-GKPGLHGQ
: . :: .: . ::::: :: ::: :: : ::.:: :: : :: :
CCDS14 VGLPGDPGLPGQPGLPGIPGS-KGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGL
680 690 700 710 720 730
120 130 140 150 160
pF1KSD PGPAGPPGFSRMGKAGPPG--LPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPG------
:: ::::: : : :: ::: :::: ::..: : .::.:. :::::::
CCDS14 EGPPGPPGFP--GPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDG
740 750 760 770 780 790
170 180 190 200 210
pF1KSD LPGPSGITIP-GKPGAQGVPGPPGF--QGEPGPQGEPGP---PGDRGLKGDNG-VGQPGL
::::.: . : :.:: .: :: ::. :: ::: : ::: :: .:. :..: : :::
CCDS14 LPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGL
800 810 820 830 840 850
220 230 240 250 260
pF1KSD --PGAPGQGGAPGPPGLPGPAGL-GKPGLDGLPGA---PGDKGESG---PPGVPGPRGEP
:: ::. :.:: :: ::: : :.::: : :: :: ::: : ::: ::: : :
CCDS14 DVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIP
860 870 880 890 900 910
270 280 290 300 310 320
pF1KSD GAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPG-----LIGPTGY-GMPGL
: : : : :: . : ::::: : .:.::::: :::: :.: : : :::
CCDS14 GRSGVPGLKGDDG--LQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGL
920 930 940 950 960 970
330 340 350 360 370 380
pF1KSD PGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGE
:: : :: : :: :: :.:: .:.:: :: : : :::::. :: :::: ::
CCDS14 PGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQ---PGLIGPPGLKGT
980 990 1000 1010 1020
390 400 410 420 430
pF1KSD AGPGGPPGVPGIRGDQGPSGLAGKPGVPG------ERGLPGAH--GPPGPTGPKGEPGFT
: : :: :..: ::::. :.:: :: ..: :: : :: :::::::.
CCDS14 IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLP
1030 1040 1050 1060 1070 1080
440 450 460 470 480 490
pF1KSD GRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPP
: ::.::. :..:. : :::: :: .: :.::. : :: ::.:. : :.::::: :
CCDS14 GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEP
1090 1100 1110 1120 1130 1140
500 510 520 530 540
pF1KSD GE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPG--APGAFDETGIAGLHLPNG
: : .:.:: :: : : ::. :: :: : : :: :: :: :..: . .:
CCDS14 GPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSG-QKGDG
1150 1160 1170 1180 1190 1200
550 560 570 580 590 600
pF1KSD GVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPAT
:. : . :. : : :: . :. :. : : : : :
CCDS14 GLPG-IPGNPGLPG-PKGEPGFHGFPG---VQGPPGPP-GSPGPALEGPKGNPGPQGPPG
1210 1220 1230 1240 1250 1260
610 620 630 640 650 660
pF1KSD GIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRP
CCDS14 RPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKG
1270 1280 1290 1300 1310 1320
>>CCDS35366.1 COL4A5 gene_id:1287|Hs108|chrX (1691 aa)
initn: 1235 init1: 764 opt: 1599 Z-score: 630.9 bits: 128.5 E(32554): 8.1e-29
Smith-Waterman score: 1786; 48.7% identity (58.8% similar) in 612 aa overlap (31-591:647-1243)
10 20 30 40 50 60
pF1KSD MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGK
: : : :: . : : : :.:
CCDS35 IGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGD
620 630 640 650 660 670
70 80 90 100 110
pF1KSD -------GQYLEMPLPLLPMDLKGEPGPPGK--PGPRGPPGPPGFPGKPGM-GKPGLHGQ
: . :: .: . ::::: :: ::: :: : ::.:: :: : :: :
CCDS35 VGLPGDPGLPGQPGLPGIPGS-KGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGL
680 690 700 710 720 730
120 130 140 150 160
pF1KSD PGPAGPPGFSRMGKAGPPG--LPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPG------
:: ::::: : : :: ::: :::: ::..: : .::.:. :::::::
CCDS35 EGPPGPPGFP--GPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDG
740 750 760 770 780 790
170 180 190 200 210
pF1KSD LPGPSGITIP-GKPGAQGVPGPPGF--QGEPGPQGEPGP---PGDRGLKGDNG-VGQPGL
::::.: . : :.:: .: :: ::. :: ::: : ::: :: .:. :..: : :::
CCDS35 LPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGL
800 810 820 830 840 850
220 230 240 250 260
pF1KSD --PGAPGQGGAPGPPGLPGPAGL-GKPGLDGLPGA---PGDKGESG---PPGVPGPRGEP
:: ::. :.:: :: ::: : :.::: : :: :: ::: : ::: ::: : :
CCDS35 DVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIP
860 870 880 890 900 910
270 280 290 300 310 320
pF1KSD GAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPG-----LIGPTGY-GMPGL
: : : : :: . : ::::: : .:.::::: :::: :.: : : :::
CCDS35 GRSGVPGLKGDDG--LQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGL
920 930 940 950 960 970
330 340 350 360 370 380
pF1KSD PGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGE
:: : :: : :: :: :.:: .:.:: :: : : :::::. :: :::: ::
CCDS35 PGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQ---PGLIGPPGLKGT
980 990 1000 1010 1020
390 400 410 420 430
pF1KSD AGPGGPPGVPGIRGDQGPSGLAGKPGVPG------ERGLPGAH--GPPGPTGPKGEPGFT
: : :: :..: ::::. :.:: :: ..: :: : :: :::::::.
CCDS35 IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLP
1030 1040 1050 1060 1070 1080
440 450 460 470 480 490
pF1KSD GRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPP
: ::.::. :..:. : :::: :: .: :.::. : :: ::.:. : :.::::: :
CCDS35 GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEP
1090 1100 1110 1120 1130 1140
500 510 520 530 540
pF1KSD GE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPG--APGAFDETGIAGLHLPNG
: : .:.:: :: : : ::. :: :: : : :: :: :: :..: . .:
CCDS35 GPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSG-QKGDG
1150 1160 1170 1180 1190 1200
550 560 570 580 590 600
pF1KSD GVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPAT
:. : . :. : : :: . :. :. : : : : :
CCDS35 GLPG-IPGNPGLPG-PKGEPGFHGFPG---VQGPPGPP-GSPGPALEGPKGNPGPQGPPG
1210 1220 1230 1240 1250 1260
610 620 630 640 650 660
pF1KSD GIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRP
CCDS35 RPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPG
1270 1280 1290 1300 1310 1320
>>CCDS6982.1 COL5A1 gene_id:1289|Hs108|chr9 (1838 aa)
initn: 619 init1: 619 opt: 1588 Z-score: 626.3 bits: 127.8 E(32554): 1.4e-28
Smith-Waterman score: 1662; 46.8% identity (56.9% similar) in 601 aa overlap (23-562:985-1563)
10 20 30 40
pF1KSD MLGTLTPLSSLLLLLLVLVLGCGPRASSGG-GAGGAAG-YAPVKYIQPM-QK
: ....: : :..: .:. :: ..
CCDS69 GPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGER
960 970 980 990 1000 1010
50 60 70 80 90 100
pF1KSD GPVGPPFREGKGQYLEMPLPLLP--MDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKP--
: ::: : :. :: : ::.::: : :: :::: :::: :. :
CCDS69 GHPGPP-----GPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVG
1020 1030 1040 1050 1060
110 120 130 140 150
pF1KSD --GLHGQPGPAGPPGFSR-------MGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRG
::.:. :: :::: . : ::: :.::. :: : :: :: : :..: .:
CCDS69 ALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQG
1070 1080 1090 1100 1110 1120
160 170 180 190 200
pF1KSD PPG------PPGLPGPSG-ITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNG
: : : :::::.: . ::. : .: : :: .: : .:: :::: : .:
CCDS69 PAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGP--
1130 1140 1150 1160 1170 1180
210 220 230 240 250
pF1KSD VGQPGLPGA---PG----QG-----GAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESG--
.:::: :: :: :: : :: :.::: : ::.:::: ::.:::.:
CCDS69 IGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPP--GPVGLQGLPGPPGEKGETGDV
1190 1200 1210 1220 1230 1240
260 270 280 290 300
pF1KSD ----PPGVPGPRGE---PGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPG
::: ::::: ::: ::.:::: :.: :::.: : : .: : :: ::::
CCDS69 GQMGPPGPPGPRGPSGAPGADGPQGPPG--GIGNPGAVGEKGEPGEAGEPGLPGEGGPPG
1250 1260 1270 1280 1290 1300
310 320 330 340 350
pF1KSD ---------LIGPTGY-GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG
::.: : :: :: :: :: : :: .: ::. : ::: :: : :
CCDS69 PKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVG---FPGDPGPPGEPGPAGQDG
1310 1320 1330 1340 1350 1360
360 370 380 390 400 410
pF1KSD PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG
::: :. : ::. : ::: :: ::.:::: :: ::.: :. : : .: : .:
CCDS69 PPGDKGDDGEPGQTGSPGPTGEPGPSGPPGK---RGPPGPAGPEGRQGEKGAKGEAGLEG
1370 1380 1390 1400 1410
420 430 440 450 460 470
pF1KSD PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSG------IPGLQGPAG
::: ::: : : :.:: :. : : :. ::::.:: :: : .:::.: .:
CCDS69 PPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSG
1420 1430 1440 1450 1460 1470
480 490 500 510 520 530
pF1KSD PIGPQGLPGLKGEPGLPGPPGE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPG
: : .: ::: :: ::::: :. :. : :: : : : ::::: :: :::::::
CCDS69 PKGEKGHPGL---IGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPG
1480 1490 1500 1510 1520 1530
540 550 560 570 580 590
pF1KSD APGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMP
:: : : :.: .: . :. : :
CCDS69 LPGPPGPKGAKGSSGPTGP-KGEA-GHPGPPGPPGPPGEVIQPLPIQASRTRRNIDASQL
1540 1550 1560 1570 1580 1590
600 610 620 630 640 650
pF1KSD VKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEY
CCDS69 LDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDG
1600 1610 1620 1630 1640 1650
>--
initn: 603 init1: 603 opt: 1117 Z-score: 447.3 bits: 94.6 E(32554): 1.4e-18
Smith-Waterman score: 1484; 46.8% identity (54.5% similar) in 547 aa overlap (48-539:451-984)
20 30 40 50 60 70
pF1KSD LVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPL-PLLPMDLK
.:: : : :. .: : : : :
CCDS69 YDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP
430 440 450 460 470 480
80 90 100 110
pF1KSD GEPG---PPGK---PGPRGPPGPPGFPGKPGM-GKPGLH-------GQPGPAGPPGF---
: :: : :. :: ::::: ::.:: :. : :: : : :: :
CCDS69 GPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVS
490 500 510 520 530 540
120 130 140 150 160
pF1KSD ------------SRM---GKAGPPGL---PGKVGPPGQPGLRGEPGIRGDQGLRGPPGPP
.:. : ::: :: :: :::::. ::.:::: : :: :: :::
CCDS69 AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPP
550 560 570 580 590 600
170 180 190 200 210 220
pF1KSD GLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGV-GQPGLPGAPG
: :.: ::: .: : : .: : :. :: ::::. : :. :. : : ::
CCDS69 G---PAG-----KPGRRGRAGSDGARGMP---GQTGPKGDRGFDGLAGLPGEKGHRGDPG
610 620 630 640
230 240 250 260 270
pF1KSD QGGAPGPPGLPGPAGL-GKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG
.: ::::: : : :. : :::: :: .: :: : ::: : ::..: : :: :
CCDS69 PSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKG
650 660 670 680 690 700
280 290 300 310 320 330
pF1KSD -VGVPGAAGLPGPQGPSGAKGEPGTRG---PPGLIGPTGYGMPGLPGPKGDRGPAGVPGL
:: : : :: :: ::.: :: .: ::: :: : ::::: : :: : ::
CCDS69 NVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGK--PGLPGMPGADGPPGHPGK
710 720 730 740 750 760
340 350 360 370 380 390
pF1KSD LGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAG-PG--GPPGVPGI
: :: : .: :: ::: : :: :. :. :. : .: : ::: : :: : :. :
CCDS69 EGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGD
770 780 790 800 810 820
400 410 420 430 440 450
pF1KSD RGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGL
::. :: : :. : : .: : .: ::: :: :: : : :: :: : : ::..:.
CCDS69 RGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGF
830 840 850 860 870 880
460 470 480 490 500
pF1KSD PGQPGL------RGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPG----EGRAGEPGT
:: :: :: : :: .: :: ::.: : .: : ::: : .: :: ::
CCDS69 PGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGE
890 900 910 920 930 940
510 520 530 540 550 560
pF1KSD AGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKP
::.:: : : :: ::::::: : :: :: ::
CCDS69 RGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGE
950 960 970 980 990 1000
570 580 590 600 610 620
pF1KSD QFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYF
CCDS69 TGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGP
1010 1020 1030 1040 1050 1060
>>CCDS75932.1 COL5A1 gene_id:1289|Hs108|chr9 (1838 aa)
initn: 619 init1: 619 opt: 1588 Z-score: 626.3 bits: 127.8 E(32554): 1.4e-28
Smith-Waterman score: 1662; 46.8% identity (56.9% similar) in 601 aa overlap (23-562:985-1563)
10 20 30 40
pF1KSD MLGTLTPLSSLLLLLLVLVLGCGPRASSGG-GAGGAAG-YAPVKYIQPM-QK
: ....: : :..: .:. :: ..
CCDS75 GPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGER
960 970 980 990 1000 1010
50 60 70 80 90 100
pF1KSD GPVGPPFREGKGQYLEMPLPLLP--MDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKP--
: ::: : :. :: : ::.::: : :: :::: :::: :. :
CCDS75 GHPGPP-----GPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVG
1020 1030 1040 1050 1060
110 120 130 140 150
pF1KSD --GLHGQPGPAGPPGFSR-------MGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRG
::.:. :: :::: . : ::: :.::. :: : :: :: : :..: .:
CCDS75 ALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQG
1070 1080 1090 1100 1110 1120
160 170 180 190 200
pF1KSD PPG------PPGLPGPSG-ITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNG
: : : :::::.: . ::. : .: : :: .: : .:: :::: : .:
CCDS75 PAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGP--
1130 1140 1150 1160 1170 1180
210 220 230 240 250
pF1KSD VGQPGLPGA---PG----QG-----GAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESG--
.:::: :: :: :: : :: :.::: : ::.:::: ::.:::.:
CCDS75 IGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPP--GPVGLQGLPGPPGEKGETGDV
1190 1200 1210 1220 1230 1240
260 270 280 290 300
pF1KSD ----PPGVPGPRGE---PGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPG
::: ::::: ::: ::.:::: :.: :::.: : : .: : :: ::::
CCDS75 GQMGPPGPPGPRGPSGAPGADGPQGPPG--GIGNPGAVGEKGEPGEAGEPGLPGEGGPPG
1250 1260 1270 1280 1290 1300
310 320 330 340 350
pF1KSD ---------LIGPTGY-GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG
::.: : :: :: :: :: : :: .: ::. : ::: :: : :
CCDS75 PKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVG---FPGDPGPPGEPGPAGQDG
1310 1320 1330 1340 1350 1360
360 370 380 390 400 410
pF1KSD PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG
::: :. : ::. : ::: :: ::.:::: :: ::.: :. : : .: : .:
CCDS75 PPGDKGDDGEPGQTGSPGPTGEPGPSGPPGK---RGPPGPAGPEGRQGEKGAKGEAGLEG
1370 1380 1390 1400 1410
420 430 440 450 460 470
pF1KSD PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSG------IPGLQGPAG
::: ::: : : :.:: :. : : :. ::::.:: :: : .:::.: .:
CCDS75 PPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSG
1420 1430 1440 1450 1460 1470
480 490 500 510 520 530
pF1KSD PIGPQGLPGLKGEPGLPGPPGE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPG
: : .: ::: :: ::::: :. :. : :: : : : ::::: :: :::::::
CCDS75 PKGEKGHPGL---IGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPG
1480 1490 1500 1510 1520 1530
540 550 560 570 580 590
pF1KSD APGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMP
:: : : :.: .: . :. : :
CCDS75 LPGPPGPKGAKGSSGPTGP-KGEA-GHPGPPGPPGPPGEVIQPLPIQASRTRRNIDASQL
1540 1550 1560 1570 1580 1590
600 610 620 630 640 650
pF1KSD VKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEY
CCDS75 LDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDG
1600 1610 1620 1630 1640 1650
>--
initn: 603 init1: 603 opt: 1117 Z-score: 447.3 bits: 94.6 E(32554): 1.4e-18
Smith-Waterman score: 1484; 46.8% identity (54.5% similar) in 547 aa overlap (48-539:451-984)
20 30 40 50 60 70
pF1KSD LVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPL-PLLPMDLK
.:: : : :. .: : : : :
CCDS75 YDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP
430 440 450 460 470 480
80 90 100 110
pF1KSD GEPG---PPGK---PGPRGPPGPPGFPGKPGM-GKPGLH-------GQPGPAGPPGF---
: :: : :. :: ::::: ::.:: :. : :: : : :: :
CCDS75 GPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVS
490 500 510 520 530 540
120 130 140 150 160
pF1KSD ------------SRM---GKAGPPGL---PGKVGPPGQPGLRGEPGIRGDQGLRGPPGPP
.:. : ::: :: :: :::::. ::.:::: : :: :: :::
CCDS75 AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPP
550 560 570 580 590 600
170 180 190 200 210 220
pF1KSD GLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGV-GQPGLPGAPG
: :.: ::: .: : : .: : :. :: ::::. : :. :. : : ::
CCDS75 G---PAG-----KPGRRGRAGSDGARGMP---GQTGPKGDRGFDGLAGLPGEKGHRGDPG
610 620 630 640
230 240 250 260 270
pF1KSD QGGAPGPPGLPGPAGL-GKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG
.: ::::: : : :. : :::: :: .: :: : ::: : ::..: : :: :
CCDS75 PSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKG
650 660 670 680 690 700
280 290 300 310 320 330
pF1KSD -VGVPGAAGLPGPQGPSGAKGEPGTRG---PPGLIGPTGYGMPGLPGPKGDRGPAGVPGL
:: : : :: :: ::.: :: .: ::: :: : ::::: : :: : ::
CCDS75 NVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGK--PGLPGMPGADGPPGHPGK
710 720 730 740 750 760
340 350 360 370 380 390
pF1KSD LGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAG-PG--GPPGVPGI
: :: : .: :: ::: : :: :. :. :. : .: : ::: : :: : :. :
CCDS75 EGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGD
770 780 790 800 810 820
400 410 420 430 440 450
pF1KSD RGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGL
::. :: : :. : : .: : .: ::: :: :: : : :: :: : : ::..:.
CCDS75 RGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGF
830 840 850 860 870 880
460 470 480 490 500
pF1KSD PGQPGL------RGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPG----EGRAGEPGT
:: :: :: : :: .: :: ::.: : .: : ::: : .: :: ::
CCDS75 PGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGE
890 900 910 920 930 940
510 520 530 540 550 560
pF1KSD AGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKP
::.:: : : :: ::::::: : :: :: ::
CCDS75 RGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGE
950 960 970 980 990 1000
570 580 590 600 610 620
pF1KSD QFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYF
CCDS75 TGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGP
1010 1020 1030 1040 1050 1060
>>CCDS780.2 COL11A1 gene_id:1301|Hs108|chr1 (1690 aa)
initn: 1167 init1: 593 opt: 1531 Z-score: 605.0 bits: 123.7 E(32554): 2.2e-27
Smith-Waterman score: 1620; 43.9% identity (56.0% similar) in 647 aa overlap (23-610:839-1465)
10 20 30 40
pF1KSD MLGTLTPLSSLLLLLLVLVLGCGPRASSGG-GAGGAAG-YAPVKYIQPM---
: ....: : ::..: .:. :.
CCDS78 GPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGER
810 820 830 840 850 860
50 60 70 80 90 100
pF1KSD -QKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGM----
. :: ::: ..: .: ::.::: : : :: : ::::. :.
CCDS78 GHPGPPGPPGEQG------LPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQ
870 880 890 900 910 920
110 120 130 140 150
pF1KSD GKPGLHGQPGPAGPPG-------FSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLR
: :::.: :: :::: . : ::: ::::. :: : :: :: : :..: .
CCDS78 GAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQ
930 940 950 960 970 980
160 170 180 190 200
pF1KSD GPPG------PPGLPGPSGIT-IPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDN
:: : : :::::.: . ::. : .: : :: .: : .:: :::: ::.:
CCDS78 GPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV
990 1000 1010 1020 1030 1040
210 220 230 240 250
pF1KSD GV-------GQPG---LPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESG---
:. :.:: : :: : : :.::: : ::.:::: ::.:::.:
CCDS78 GAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG--PIGLQGLPGPPGEKGENGDVG
1050 1060 1070 1080 1090 1100
260 270 280 290 300
pF1KSD ---PPGVPGPRGE--P-GAVGPKGPPG----VDGVGV---PGAAGLPGPQGPSGAKGEPG
::: ::::: : :: ::.:::: : ::: :: :: ::: : .:. : :
CCDS78 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKG
1110 1120 1130 1140 1150 1160
310 320 330 340 350 360
pF1KSD TRGPPGLIGPTGY-GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPG
:: : :: : : :: :: :: :: : :: .: :.:: :::: : .:.:: :
CCDS78 ERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKG
1170 1180 1190 1200 1210 1220
370 380 390 400 410 420
pF1KSD LPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPG
:. ::. :::::.::::: :::: :: : .: :. : : .: ::.::::
CCDS78 EDGD---PGQPGPPGPSGEAGPPGPPGK---RGPPGAAGAEGRQGEKGAKGEAGAEGPPG
1230 1240 1250 1260 1270
430 440 450 460 470
pF1KSD PTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ------PGLRGPSGIPGLQGPAGPIG
::: : : .:.:: :. : : :. :::: :: :: :.:::.: : :
CCDS78 KTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKG
1280 1290 1300 1310 1320 1330
480 490 500 510 520 530
pF1KSD PQGLPGLKGEPGLPGPPGE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPG
.: ::: :: ::::: :. :. : : : ::. :. :: :: :: ::::::: ::
CCDS78 EKGHPGL---IGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPG
1340 1350 1360 1370 1380 1390
540 550 560 570 580 590
pF1KSD AFDETGIAGLHLPNGGV-EGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVK
: : : : .... : :.: ::. . : ... : . :: .
CCDS78 PQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP-GEV-IQPLPILSSKKTRRH-TEGMQAD
1400 1410 1420 1430 1440
600 610 620 630 640 650
pF1KSD FDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKK
: .. . .:.. :
CCDS78 ADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWI
1450 1460 1470 1480 1490 1500
>--
initn: 585 init1: 585 opt: 1029 Z-score: 414.2 bits: 88.4 E(32554): 9.5e-17
Smith-Waterman score: 1500; 45.2% identity (54.8% similar) in 571 aa overlap (28-539:301-838)
10 20 30 40 50
pF1KSD MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYA--PVKYIQP--MQKGPVG
.: :: : : :. ..: . .:: :
CCDS78 YEYGEAEYKEAESVTEGPTVTEETIAQTEINGHGAYGEKGQKGEPA-VVEPGMLVEGPPG
280 290 300 310 320
60 70 80 90 100
pF1KSD PPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGM-GKPGL-----
: : . : :.: :::: :: ::::: ::.:: :. : ::
CCDS78 PAGPAGI---------MGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLP
330 340 350 360 370 380
110 120 130 140
pF1KSD --HGQPGPAGPPGFSRMGKA------------GPPG------LPGKVGPPGQPGLRGE--
.: : :: .. ..: :::: :: :: ::. : .::
CCDS78 FRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESG
390 400 410 420 430 440
150 160 170 180
pF1KSD -PGIRGDQGLRGPPGPPGLPG----PS---GITIPGKPGAQG---------VPGPPGFQG
:: .: .:..::::: : :: :. : .::.:::.: .:: : .:
CCDS78 DPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRG
450 460 470 480 490 500
190 200 210 220 230 240
pF1KSD EPGPQGEPGPPGDRGLKGDNG-VGQPGLPGAPGQGGAPGPPGLPGPAGL-GKPGLDGLPG
: :::: :::::: :..:..: .: :::: : : :: : :: : : :.:: ::
CCDS78 ERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPG
510 520 530 540 550 560
250 260 270 280 290
pF1KSD APGD---KGESGPPGV---PGPRGEPGAVGPKGPPGVDGV-GVPGAAGLPGPQGPSGAKG
:. .:: :::: :::.: :: :: :::: : : :: ::::: .:: : :
CCDS78 PKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPG
570 580 590 600 610 620
300 310 320 330 340 350
pF1KSD EPGTRGPPGLIGPTGYGMP-GLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG
. : : : .:: : : : :::.: .: :: :: :..:: :::: :: .: .:: :
CCDS78 KEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKG
630 640 650 660 670 680
360 370 380 390 400 410
pF1KSD PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG
: :. : :. :: ::::.::: : :: ::: ::. :. :.:: :
CCDS78 DRGEVGQIGPRGEDGPEGPKGRAGPTGDPG---------PSGQAGE---KGKLGVPGLPG
690 700 710 720
420 430 440 450 460 470
pF1KSD PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG
:: :::: :: :: :: :.:: :. :.:: :: : : .: : :: :
CCDS78 YPGRQGPKGSTGF------PGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTG
730 740 750 760 770 780
480 490 500 510 520 530
pF1KSD LPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDE
:: :: : :::: :: :: :: : : :: ::::::: : :: :: :
CCDS78 KPGPKGTSGGDGPPGP-----PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGE
790 800 810 820 830
540 550 560 570 580 590
pF1KSD TGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTL
:
CCDS78 TGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGP
840 850 860 870 880 890
>>CCDS53348.1 COL11A1 gene_id:1301|Hs108|chr1 (1767 aa)
initn: 1167 init1: 593 opt: 1531 Z-score: 604.8 bits: 123.7 E(32554): 2.3e-27
Smith-Waterman score: 1620; 43.9% identity (56.0% similar) in 647 aa overlap (23-610:916-1542)
10 20 30 40
pF1KSD MLGTLTPLSSLLLLLLVLVLGCGPRASSGG-GAGGAAG-YAPVKYIQPM---
: ....: : ::..: .:. :.
CCDS53 GPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGER
890 900 910 920 930 940
50 60 70 80 90 100
pF1KSD -QKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGM----
. :: ::: ..: .: ::.::: : : :: : ::::. :.
CCDS53 GHPGPPGPPGEQG------LPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQ
950 960 970 980 990
110 120 130 140 150
pF1KSD GKPGLHGQPGPAGPPG-------FSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLR
: :::.: :: :::: . : ::: ::::. :: : :: :: : :..: .
CCDS53 GAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQ
1000 1010 1020 1030 1040 1050
160 170 180 190 200
pF1KSD GPPG------PPGLPGPSGIT-IPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDN
:: : : :::::.: . ::. : .: : :: .: : .:: :::: ::.:
CCDS53 GPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV
1060 1070 1080 1090 1100 1110
210 220 230 240 250
pF1KSD GV-------GQPG---LPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESG---
:. :.:: : :: : : :.::: : ::.:::: ::.:::.:
CCDS53 GAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG--PIGLQGLPGPPGEKGENGDVG
1120 1130 1140 1150 1160 1170
260 270 280 290 300
pF1KSD ---PPGVPGPRGE--P-GAVGPKGPPG----VDGVGV---PGAAGLPGPQGPSGAKGEPG
::: ::::: : :: ::.:::: : ::: :: :: ::: : .:. : :
CCDS53 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKG
1180 1190 1200 1210 1220 1230
310 320 330 340 350 360
pF1KSD TRGPPGLIGPTGY-GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPG
:: : :: : : :: :: :: :: : :: .: :.:: :::: : .:.:: :
CCDS53 ERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKG
1240 1250 1260 1270 1280 1290
370 380 390 400 410 420
pF1KSD LPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPG
:. ::. :::::.::::: :::: :: : .: :. : : .: ::.::::
CCDS53 EDGD---PGQPGPPGPSGEAGPPGPPGK---RGPPGAAGAEGRQGEKGAKGEAGAEGPPG
1300 1310 1320 1330 1340 1350
430 440 450 460 470
pF1KSD PTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ------PGLRGPSGIPGLQGPAGPIG
::: : : .:.:: :. : : :. :::: :: :: :.:::.: : :
CCDS53 KTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKG
1360 1370 1380 1390 1400 1410
480 490 500 510 520 530
pF1KSD PQGLPGLKGEPGLPGPPGE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPG
.: ::: :: ::::: :. :. : : : ::. :. :: :: :: ::::::: ::
CCDS53 EKGHPGL---IGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPG
1420 1430 1440 1450 1460
540 550 560 570 580 590
pF1KSD AFDETGIAGLHLPNGGV-EGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVK
: : : : .... : :.: ::. . : ... : . :: .
CCDS53 PQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP-GEV-IQPLPILSSKKTRRH-TEGMQAD
1470 1480 1490 1500 1510 1520
600 610 620 630 640 650
pF1KSD FDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKK
: .. . .:.. :
CCDS53 ADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWI
1530 1540 1550 1560 1570 1580
>--
initn: 585 init1: 585 opt: 1049 Z-score: 421.6 bits: 89.8 E(32554): 3.7e-17
Smith-Waterman score: 1500; 45.2% identity (54.8% similar) in 571 aa overlap (28-539:378-915)
10 20 30 40 50
pF1KSD MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYA--PVKYIQP--MQKGPVG
.: :: : : :. ..: . .:: :
CCDS53 KEYEDKPTSPPNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPA-VVEPGMLVEGPPG
350 360 370 380 390 400
60 70 80 90 100
pF1KSD PPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGM-GKPGL-----
: : . : :.: :::: :: ::::: ::.:: :. : ::
CCDS53 PAGPAGI---------MGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLP
410 420 430 440 450
110 120 130 140
pF1KSD --HGQPGPAGPPGFSRMGKA------------GPPG------LPGKVGPPGQPGLRGE--
.: : :: .. ..: :::: :: :: ::. : .::
CCDS53 FRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESG
460 470 480 490 500 510
150 160 170 180
pF1KSD -PGIRGDQGLRGPPGPPGLPG----PS---GITIPGKPGAQG---------VPGPPGFQG
:: .: .:..::::: : :: :. : .::.:::.: .:: : .:
CCDS53 DPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRG
520 530 540 550 560 570
190 200 210 220 230 240
pF1KSD EPGPQGEPGPPGDRGLKGDNG-VGQPGLPGAPGQGGAPGPPGLPGPAGL-GKPGLDGLPG
: :::: :::::: :..:..: .: :::: : : :: : :: : : :.:: ::
CCDS53 ERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPG
580 590 600 610 620 630
250 260 270 280 290
pF1KSD APGD---KGESGPPGV---PGPRGEPGAVGPKGPPGVDGV-GVPGAAGLPGPQGPSGAKG
:. .:: :::: :::.: :: :: :::: : : :: ::::: .:: : :
CCDS53 PKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPG
640 650 660 670 680 690
300 310 320 330 340 350
pF1KSD EPGTRGPPGLIGPTGYGMP-GLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG
. : : : .:: : : : :::.: .: :: :: :..:: :::: :: .: .:: :
CCDS53 KEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKG
700 710 720 730 740 750
360 370 380 390 400 410
pF1KSD PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG
: :. : :. :: ::::.::: : :: ::: ::. :. :.:: :
CCDS53 DRGEVGQIGPRGEDGPEGPKGRAGPTGDPG---------PSGQAGE---KGKLGVPGLPG
760 770 780 790 800
420 430 440 450 460 470
pF1KSD PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG
:: :::: :: :: :: :.:: :. :.:: :: : : .: : :: :
CCDS53 YPGRQGPKGSTGF------PGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTG
810 820 830 840 850
480 490 500 510 520 530
pF1KSD LPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDE
:: :: : :::: :: :: :: : : :: ::::::: : :: :: :
CCDS53 KPGPKGTSGGDGPPGP-----PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGE
860 870 880 890 900 910
540 550 560 570 580 590
pF1KSD TGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTL
:
CCDS53 TGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGP
920 930 940 950 960 970
703 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 08:56:28 2016 done: Thu Nov 3 08:56:29 2016
Total Scan time: 5.020 Total Display time: 0.270
Function used was FASTA [36.3.4 Apr, 2011]