Result of FASTA (omim) for
pF1KSDB0040
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDB0040, 620 aa
1>>>pF1KSDB0040 620 - 620 aa - 620 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5776+/-0.000604; mu= 1.6073+/- 0.036
mean_var=274.5967+/-58.582, 0's: 0 Z-trim(112.1): 427 B-trim: 355 in 2/55
Lambda= 0.077397
statistics sampled from 20382 (20938) to 20382 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.598), E-opt: 0.2 (0.245), width: 16
Scan time: 8.140
The best scores are: opt bits E(85289)
NP_116197 (OMIM: 609791) leucine-rich repeat and i ( 620) 4149 478.4 3.3e-134
NP_001288123 (OMIM: 609791) leucine-rich repeat an ( 614) 4112 474.2 5.7e-133
XP_016878171 (OMIM: 609791) PREDICTED: leucine-ric ( 614) 4112 474.2 5.7e-133
NP_001288128 (OMIM: 609791) leucine-rich repeat an ( 614) 4112 474.2 5.7e-133
NP_001288124 (OMIM: 609791) leucine-rich repeat an ( 614) 4112 474.2 5.7e-133
XP_011520420 (OMIM: 609791) PREDICTED: leucine-ric ( 614) 4112 474.2 5.7e-133
NP_001288129 (OMIM: 609791) leucine-rich repeat an ( 614) 4112 474.2 5.7e-133
NP_001288126 (OMIM: 609791) leucine-rich repeat an ( 614) 4112 474.2 5.7e-133
NP_001288115 (OMIM: 609791) leucine-rich repeat an ( 614) 4112 474.2 5.7e-133
NP_001288120 (OMIM: 609791) leucine-rich repeat an ( 614) 4112 474.2 5.7e-133
NP_001288127 (OMIM: 609791) leucine-rich repeat an ( 614) 4112 474.2 5.7e-133
NP_001288116 (OMIM: 609791) leucine-rich repeat an ( 614) 4112 474.2 5.7e-133
NP_001288121 (OMIM: 609791) leucine-rich repeat an ( 614) 4112 474.2 5.7e-133
NP_001288118 (OMIM: 609791) leucine-rich repeat an ( 614) 4112 474.2 5.7e-133
XP_011516021 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 2519 296.3 2e-79
NP_001245211 (OMIM: 609793) leucine-rich repeat an ( 606) 2519 296.3 2e-79
XP_016869792 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 2519 296.3 2e-79
XP_016869796 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 2519 296.3 2e-79
XP_011516026 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 2519 296.3 2e-79
NP_689783 (OMIM: 609793) leucine-rich repeat and i ( 606) 2519 296.3 2e-79
XP_011516030 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 2519 296.3 2e-79
XP_016869795 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 2519 296.3 2e-79
XP_016869794 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 2519 296.3 2e-79
XP_016869793 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 2519 296.3 2e-79
NP_001094861 (OMIM: 609792) leucine-rich repeat an ( 592) 1857 222.4 3.5e-57
NP_001004432 (OMIM: 609794) leucine-rich repeat an ( 593) 1491 181.5 7e-45
NP_060960 (OMIM: 606666,615311) leucine-rich repea ( 951) 533 74.8 1.5e-12
NP_001245348 (OMIM: 608817) leucine-rich repeat-co ( 640) 529 74.2 1.6e-12
XP_016873568 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_011518542 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_011518544 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_016873567 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_016873563 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_011518540 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_016873562 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
NP_065980 (OMIM: 608817) leucine-rich repeat-conta ( 640) 529 74.2 1.6e-12
XP_011518546 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_016873566 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_011518541 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_011518545 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_016873565 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_016873559 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_016873564 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_016873561 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_011518543 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
XP_016873560 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 529 74.2 1.6e-12
NP_001278917 (OMIM: 603104) carboxypeptidase N sub ( 545) 522 73.3 2.5e-12
NP_001073982 (OMIM: 603104) carboxypeptidase N sub ( 545) 522 73.3 2.5e-12
XP_005269337 (OMIM: 603104) PREDICTED: carboxypept ( 545) 522 73.3 2.5e-12
XP_016874279 (OMIM: 608870) PREDICTED: leucine-ric ( 623) 520 73.1 3.2e-12
>>NP_116197 (OMIM: 609791) leucine-rich repeat and immun (620 aa)
initn: 4149 init1: 4149 opt: 4149 Z-score: 2530.5 bits: 478.4 E(85289): 3.3e-134
Smith-Waterman score: 4149; 100.0% identity (100.0% similar) in 620 aa overlap (1-620:1-620)
10 20 30 40 50 60
pF1KSD MQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 MQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
550 560 570 580 590 600
610 620
pF1KSD KSDAGISSADAPRKFNMKMI
::::::::::::::::::::
NP_116 KSDAGISSADAPRKFNMKMI
610 620
>>NP_001288123 (OMIM: 609791) leucine-rich repeat and im (614 aa)
initn: 4112 init1: 4112 opt: 4112 Z-score: 2508.2 bits: 474.2 E(85289): 5.7e-133
Smith-Waterman score: 4112; 100.0% identity (100.0% similar) in 614 aa overlap (7-620:1-614)
10 20 30 40 50 60
pF1KSD MQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
10 20 30 40 50
70 80 90 100 110 120
pF1KSD RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
540 550 560 570 580 590
610 620
pF1KSD KSDAGISSADAPRKFNMKMI
::::::::::::::::::::
NP_001 KSDAGISSADAPRKFNMKMI
600 610
>>XP_016878171 (OMIM: 609791) PREDICTED: leucine-rich re (614 aa)
initn: 4112 init1: 4112 opt: 4112 Z-score: 2508.2 bits: 474.2 E(85289): 5.7e-133
Smith-Waterman score: 4112; 100.0% identity (100.0% similar) in 614 aa overlap (7-620:1-614)
10 20 30 40 50 60
pF1KSD MQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
10 20 30 40 50
70 80 90 100 110 120
pF1KSD RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
540 550 560 570 580 590
610 620
pF1KSD KSDAGISSADAPRKFNMKMI
::::::::::::::::::::
XP_016 KSDAGISSADAPRKFNMKMI
600 610
>>NP_001288128 (OMIM: 609791) leucine-rich repeat and im (614 aa)
initn: 4112 init1: 4112 opt: 4112 Z-score: 2508.2 bits: 474.2 E(85289): 5.7e-133
Smith-Waterman score: 4112; 100.0% identity (100.0% similar) in 614 aa overlap (7-620:1-614)
10 20 30 40 50 60
pF1KSD MQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
10 20 30 40 50
70 80 90 100 110 120
pF1KSD RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
540 550 560 570 580 590
610 620
pF1KSD KSDAGISSADAPRKFNMKMI
::::::::::::::::::::
NP_001 KSDAGISSADAPRKFNMKMI
600 610
>>NP_001288124 (OMIM: 609791) leucine-rich repeat and im (614 aa)
initn: 4112 init1: 4112 opt: 4112 Z-score: 2508.2 bits: 474.2 E(85289): 5.7e-133
Smith-Waterman score: 4112; 100.0% identity (100.0% similar) in 614 aa overlap (7-620:1-614)
10 20 30 40 50 60
pF1KSD MQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
10 20 30 40 50
70 80 90 100 110 120
pF1KSD RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
540 550 560 570 580 590
610 620
pF1KSD KSDAGISSADAPRKFNMKMI
::::::::::::::::::::
NP_001 KSDAGISSADAPRKFNMKMI
600 610
>>XP_011520420 (OMIM: 609791) PREDICTED: leucine-rich re (614 aa)
initn: 4112 init1: 4112 opt: 4112 Z-score: 2508.2 bits: 474.2 E(85289): 5.7e-133
Smith-Waterman score: 4112; 100.0% identity (100.0% similar) in 614 aa overlap (7-620:1-614)
10 20 30 40 50 60
pF1KSD MQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
10 20 30 40 50
70 80 90 100 110 120
pF1KSD RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
540 550 560 570 580 590
610 620
pF1KSD KSDAGISSADAPRKFNMKMI
::::::::::::::::::::
XP_011 KSDAGISSADAPRKFNMKMI
600 610
>>NP_001288129 (OMIM: 609791) leucine-rich repeat and im (614 aa)
initn: 4112 init1: 4112 opt: 4112 Z-score: 2508.2 bits: 474.2 E(85289): 5.7e-133
Smith-Waterman score: 4112; 100.0% identity (100.0% similar) in 614 aa overlap (7-620:1-614)
10 20 30 40 50 60
pF1KSD MQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
10 20 30 40 50
70 80 90 100 110 120
pF1KSD RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
540 550 560 570 580 590
610 620
pF1KSD KSDAGISSADAPRKFNMKMI
::::::::::::::::::::
NP_001 KSDAGISSADAPRKFNMKMI
600 610
>>NP_001288126 (OMIM: 609791) leucine-rich repeat and im (614 aa)
initn: 4112 init1: 4112 opt: 4112 Z-score: 2508.2 bits: 474.2 E(85289): 5.7e-133
Smith-Waterman score: 4112; 100.0% identity (100.0% similar) in 614 aa overlap (7-620:1-614)
10 20 30 40 50 60
pF1KSD MQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
10 20 30 40 50
70 80 90 100 110 120
pF1KSD RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
540 550 560 570 580 590
610 620
pF1KSD KSDAGISSADAPRKFNMKMI
::::::::::::::::::::
NP_001 KSDAGISSADAPRKFNMKMI
600 610
>>NP_001288115 (OMIM: 609791) leucine-rich repeat and im (614 aa)
initn: 4112 init1: 4112 opt: 4112 Z-score: 2508.2 bits: 474.2 E(85289): 5.7e-133
Smith-Waterman score: 4112; 100.0% identity (100.0% similar) in 614 aa overlap (7-620:1-614)
10 20 30 40 50 60
pF1KSD MQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
10 20 30 40 50
70 80 90 100 110 120
pF1KSD RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
540 550 560 570 580 590
610 620
pF1KSD KSDAGISSADAPRKFNMKMI
::::::::::::::::::::
NP_001 KSDAGISSADAPRKFNMKMI
600 610
>>NP_001288120 (OMIM: 609791) leucine-rich repeat and im (614 aa)
initn: 4112 init1: 4112 opt: 4112 Z-score: 2508.2 bits: 474.2 E(85289): 5.7e-133
Smith-Waterman score: 4112; 100.0% identity (100.0% similar) in 614 aa overlap (7-620:1-614)
10 20 30 40 50 60
pF1KSD MQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
10 20 30 40 50
70 80 90 100 110 120
pF1KSD RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
540 550 560 570 580 590
610 620
pF1KSD KSDAGISSADAPRKFNMKMI
::::::::::::::::::::
NP_001 KSDAGISSADAPRKFNMKMI
600 610
620 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 08:16:47 2016 done: Thu Nov 3 08:16:48 2016
Total Scan time: 8.140 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]