Result of FASTA (omim) for
pF1KSDA1970
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1970, 523 aa
1>>>pF1KSDA1970 523 - 523 aa - 523 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1965+/-0.000342; mu= 19.9121+/- 0.021
mean_var=77.4713+/-15.636, 0's: 0 Z-trim(115.3): 14 B-trim: 28 in 1/55
Lambda= 0.145715
statistics sampled from 25608 (25621) to 25608 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.3), width: 16
Scan time: 10.970
The best scores are: opt bits E(85289)
NP_001077083 (OMIM: 612799,614924) probable glutam ( 523) 3484 742.0 1e-213
NP_001295140 (OMIM: 612799,614924) probable glutam ( 534) 3312 705.9 7.8e-203
XP_011544040 (OMIM: 612799,614924) PREDICTED: prob ( 499) 3190 680.2 3.9e-195
XP_011544041 (OMIM: 612799,614924) PREDICTED: prob ( 430) 2884 615.8 8e-176
XP_016862454 (OMIM: 603727,615760) PREDICTED: glut ( 751) 161 43.6 0.0026
NP_001259002 (OMIM: 603727,615760) glutamine--tRNA ( 764) 161 43.6 0.0026
NP_005042 (OMIM: 603727,615760) glutamine--tRNA li ( 775) 161 43.6 0.0026
>>NP_001077083 (OMIM: 612799,614924) probable glutamate- (523 aa)
initn: 3484 init1: 3484 opt: 3484 Z-score: 3958.1 bits: 742.0 E(85289): 1e-213
Smith-Waterman score: 3484; 100.0% identity (100.0% similar) in 523 aa overlap (1-523:1-523)
10 20 30 40 50 60
pF1KSD MAALLRRLLQRERPSAASGRPVGRREANLGTDAGVAVRVRFAPSPTGFLHLGGLRTALYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAALLRRLLQRERPSAASGRPVGRREANLGTDAGVAVRVRFAPSPTGFLHLGGLRTALYN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD YIFAKKYQGSFILRLEDTDQTRVVPGAAENIEDMLEWAGIPPDESPRRGGPAGPYQQSQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIFAKKYQGSFILRLEDTDQTRVVPGAAENIEDMLEWAGIPPDESPRRGGPAGPYQQSQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LELYAQATEALLKTGAAYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQVAQKLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LELYAQATEALLKTGAAYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQVAQKLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD KDPKPAIRFRLEQVVPAFQDLVYGWNRHEVASVEGDPVIMKSDGFPTYHLACVVDDHHMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDPKPAIRFRLEQVVPAFQDLVYGWNRHEVASVEGDPVIMKSDGFPTYHLACVVDDHHMG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ISHVLRGSEWLVSTAKHLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHFAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISHVLRGSEWLVSTAKHLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHFAAD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD GFLPDSLLDIITNCGSGFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRLHLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFLPDSLLDIITNCGSGFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRLHLQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD RLVSNESQRRQLVGKLQVLVEEAFGCQLQNRDVLNPVYVERILLLRQGHICRLQDLVSPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLVSNESQRRQLVGKLQVLVEEAFGCQLQNRDVLNPVYVERILLLRQGHICRLQDLVSPV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD YSYLWTRPAVGRAQLDAISEKVDVIAKRVLGLLERSSMSLTQDMLNGELKKLSEGLEGTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSYLWTRPAVGRAQLDAISEKVDVIAKRVLGLLERSSMSLTQDMLNGELKKLSEGLEGTK
430 440 450 460 470 480
490 500 510 520
pF1KSD YSNVMKLLRMALSGQQQGPPVAEMMLALGPKEVRERIQKVVSS
:::::::::::::::::::::::::::::::::::::::::::
NP_001 YSNVMKLLRMALSGQQQGPPVAEMMLALGPKEVRERIQKVVSS
490 500 510 520
>>NP_001295140 (OMIM: 612799,614924) probable glutamate- (534 aa)
initn: 3311 init1: 3311 opt: 3312 Z-score: 3762.6 bits: 705.9 E(85289): 7.8e-203
Smith-Waterman score: 3312; 99.6% identity (99.6% similar) in 500 aa overlap (1-498:1-500)
10 20 30 40 50 60
pF1KSD MAALLRRLLQRERPSAASGRPVGRREANLGTDAGVAVRVRFAPSPTGFLHLGGLRTALYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAALLRRLLQRERPSAASGRPVGRREANLGTDAGVAVRVRFAPSPTGFLHLGGLRTALYN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD YIFAKKYQGSFILRLEDTDQTRVVPGAAENIEDMLEWAGIPPDESPRRGGPAGPYQQSQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIFAKKYQGSFILRLEDTDQTRVVPGAAENIEDMLEWAGIPPDESPRRGGPAGPYQQSQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LELYAQATEALLKTGAAYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQVAQKLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LELYAQATEALLKTGAAYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQVAQKLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD KDPKPAIRFRLEQVVPAFQDLVYGWNRHEVASVEGDPVIMKSDGFPTYHLACVVDDHHMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDPKPAIRFRLEQVVPAFQDLVYGWNRHEVASVEGDPVIMKSDGFPTYHLACVVDDHHMG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ISHVLRGSEWLVSTAKHLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHFAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISHVLRGSEWLVSTAKHLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHFAAD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD GFLPDSLLDIITNCGSGFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRLHLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFLPDSLLDIITNCGSGFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRLHLQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD RLVSNESQRRQLVGKLQVLVEEAFGCQLQNRDVLNPVYVERILLLRQGHICRLQDLVSPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLVSNESQRRQLVGKLQVLVEEAFGCQLQNRDVLNPVYVERILLLRQGHICRLQDLVSPV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD YSYLWTRPAVGRAQLDAISEKVDVIAKRVLGLLERSSMSLTQDMLNGELKKLSEGLEGTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSYLWTRPAVGRAQLDAISEKVDVIAKRVLGLLERSSMSLTQDMLNGELKKLSEGLEGTK
430 440 450 460 470 480
490 500 510 520
pF1KSD YSNVMKLLRMALSGQQ--QGPPVAEMMLALGPKEVRERIQKVVSS
:::::::::::::::: ::
NP_001 YSNVMKLLRMALSGQQVRQGHGLDCSLEPLIDPLNLHFLAGTELNIEYTKVNET
490 500 510 520 530
>>XP_011544040 (OMIM: 612799,614924) PREDICTED: probable (499 aa)
initn: 3190 init1: 3190 opt: 3190 Z-score: 3624.3 bits: 680.2 E(85289): 3.9e-195
Smith-Waterman score: 3190; 100.0% identity (100.0% similar) in 477 aa overlap (47-523:23-499)
20 30 40 50 60 70
pF1KSD ASGRPVGRREANLGTDAGVAVRVRFAPSPTGFLHLGGLRTALYNYIFAKKYQGSFILRLE
::::::::::::::::::::::::::::::
XP_011 MCIDDNLCNRCCRRWDTVIIEKGFLHLGGLRTALYNYIFAKKYQGSFILRLE
10 20 30 40 50
80 90 100 110 120 130
pF1KSD DTDQTRVVPGAAENIEDMLEWAGIPPDESPRRGGPAGPYQQSQRLELYAQATEALLKTGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DTDQTRVVPGAAENIEDMLEWAGIPPDESPRRGGPAGPYQQSQRLELYAQATEALLKTGA
60 70 80 90 100 110
140 150 160 170 180 190
pF1KSD AYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQVAQKLAKDPKPAIRFRLEQVVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQVAQKLAKDPKPAIRFRLEQVVP
120 130 140 150 160 170
200 210 220 230 240 250
pF1KSD AFQDLVYGWNRHEVASVEGDPVIMKSDGFPTYHLACVVDDHHMGISHVLRGSEWLVSTAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AFQDLVYGWNRHEVASVEGDPVIMKSDGFPTYHLACVVDDHHMGISHVLRGSEWLVSTAK
180 190 200 210 220 230
260 270 280 290 300 310
pF1KSD HLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHFAADGFLPDSLLDIITNCGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHFAADGFLPDSLLDIITNCGS
240 250 260 270 280 290
320 330 340 350 360 370
pF1KSD GFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRLHLQRLVSNESQRRQLVGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRLHLQRLVSNESQRRQLVGKL
300 310 320 330 340 350
380 390 400 410 420 430
pF1KSD QVLVEEAFGCQLQNRDVLNPVYVERILLLRQGHICRLQDLVSPVYSYLWTRPAVGRAQLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVLVEEAFGCQLQNRDVLNPVYVERILLLRQGHICRLQDLVSPVYSYLWTRPAVGRAQLD
360 370 380 390 400 410
440 450 460 470 480 490
pF1KSD AISEKVDVIAKRVLGLLERSSMSLTQDMLNGELKKLSEGLEGTKYSNVMKLLRMALSGQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AISEKVDVIAKRVLGLLERSSMSLTQDMLNGELKKLSEGLEGTKYSNVMKLLRMALSGQQ
420 430 440 450 460 470
500 510 520
pF1KSD QGPPVAEMMLALGPKEVRERIQKVVSS
:::::::::::::::::::::::::::
XP_011 QGPPVAEMMLALGPKEVRERIQKVVSS
480 490
>>XP_011544041 (OMIM: 612799,614924) PREDICTED: probable (430 aa)
initn: 2884 init1: 2884 opt: 2884 Z-score: 3277.6 bits: 615.8 E(85289): 8e-176
Smith-Waterman score: 2884; 100.0% identity (100.0% similar) in 430 aa overlap (94-523:1-430)
70 80 90 100 110 120
pF1KSD AKKYQGSFILRLEDTDQTRVVPGAAENIEDMLEWAGIPPDESPRRGGPAGPYQQSQRLEL
::::::::::::::::::::::::::::::
XP_011 MLEWAGIPPDESPRRGGPAGPYQQSQRLEL
10 20 30
130 140 150 160 170 180
pF1KSD YAQATEALLKTGAAYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQVAQKLAKDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YAQATEALLKTGAAYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQVAQKLAKDP
40 50 60 70 80 90
190 200 210 220 230 240
pF1KSD KPAIRFRLEQVVPAFQDLVYGWNRHEVASVEGDPVIMKSDGFPTYHLACVVDDHHMGISH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPAIRFRLEQVVPAFQDLVYGWNRHEVASVEGDPVIMKSDGFPTYHLACVVDDHHMGISH
100 110 120 130 140 150
250 260 270 280 290 300
pF1KSD VLRGSEWLVSTAKHLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHFAADGFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLRGSEWLVSTAKHLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHFAADGFL
160 170 180 190 200 210
310 320 330 340 350 360
pF1KSD PDSLLDIITNCGSGFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRLHLQRLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDSLLDIITNCGSGFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRLHLQRLV
220 230 240 250 260 270
370 380 390 400 410 420
pF1KSD SNESQRRQLVGKLQVLVEEAFGCQLQNRDVLNPVYVERILLLRQGHICRLQDLVSPVYSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SNESQRRQLVGKLQVLVEEAFGCQLQNRDVLNPVYVERILLLRQGHICRLQDLVSPVYSY
280 290 300 310 320 330
430 440 450 460 470 480
pF1KSD LWTRPAVGRAQLDAISEKVDVIAKRVLGLLERSSMSLTQDMLNGELKKLSEGLEGTKYSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LWTRPAVGRAQLDAISEKVDVIAKRVLGLLERSSMSLTQDMLNGELKKLSEGLEGTKYSN
340 350 360 370 380 390
490 500 510 520
pF1KSD VMKLLRMALSGQQQGPPVAEMMLALGPKEVRERIQKVVSS
::::::::::::::::::::::::::::::::::::::::
XP_011 VMKLLRMALSGQQQGPPVAEMMLALGPKEVRERIQKVVSS
400 410 420 430
>>XP_016862454 (OMIM: 603727,615760) PREDICTED: glutamin (751 aa)
initn: 158 init1: 158 opt: 161 Z-score: 180.6 bits: 43.6 E(85289): 0.0026
Smith-Waterman score: 209; 27.7% identity (50.0% similar) in 242 aa overlap (34-269:279-497)
10 20 30 40 50 60
pF1KSD LLRRLLQRERPSAASGRPVGRREANLGTDAGVAVRVRFAPSPTGFLHLGGLRTALYNYIF
: ::.:: : :.:.::.: .. .:. .
XP_016 FHKPGENYKTPGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGY
250 260 270 280 290 300
70 80 90 100 110 120
pF1KSD AKKYQGSFILRLEDTDQTRVVPGAAENIEDMLEWAGIPPDESPRRGGPAGPYQQSQRLEL
:: .: .::..::. . : ::. : : : . : .. .:
XP_016 AKANNGICFLRFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVT--------YASDYFDQL
310 320 330 340 350 360
130 140 150 160 170 180
pF1KSD YAQATEALLKTGAAYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQV---AQKLA
:: :.: :.. : :: : :: : :..:.: : : : . . :.. .
XP_016 YAWAVE-LIRRGLAYVCH---QR-----GEELKGHNTLPSPWRDRPMEESLLLFEAMRKG
370 380 390 400 410
190 200 210 220 230
pF1KSD KDPKPAIRFRLEQVVPAFQ-DLVYGWNRHEVASVEGDPVIMKSDGFPTY-HLACVVDD-H
: . .:.. :. . : : .. :: . .::: . :. :. .
XP_016 KFSEGEATLRMKLVMEDGKMDPVAYRVKYTPHHRTGDKWCI----YPTYDYTHCLCDSIE
420 430 440 450 460
240 250 260 270 280 290
pF1KSD HMGISHVLRGSEWLVSTAKHLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHF
: :.: : .:. . .... : .:: :
XP_016 H--ITHSLCTKEFQARRSSYFWLCNALDVYCPVQWEYGRLNLHYAVVSKRKILQLVATGA
470 480 490 500 510 520
300 310 320 330 340 350
pF1KSD AADGFLPDSLLDIITNCGSGFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRL
XP_016 VRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPR
530 540 550 560 570 580
>>NP_001259002 (OMIM: 603727,615760) glutamine--tRNA lig (764 aa)
initn: 158 init1: 158 opt: 161 Z-score: 180.5 bits: 43.6 E(85289): 0.0026
Smith-Waterman score: 209; 27.7% identity (50.0% similar) in 242 aa overlap (34-269:250-468)
10 20 30 40 50 60
pF1KSD LLRRLLQRERPSAASGRPVGRREANLGTDAGVAVRVRFAPSPTGFLHLGGLRTALYNYIF
: ::.:: : :.:.::.: .. .:. .
NP_001 FHKPGENYKTPGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGY
220 230 240 250 260 270
70 80 90 100 110 120
pF1KSD AKKYQGSFILRLEDTDQTRVVPGAAENIEDMLEWAGIPPDESPRRGGPAGPYQQSQRLEL
:: .: .::..::. . : ::. : : : . : .. .:
NP_001 AKANNGICFLRFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVT--------YASDYFDQL
280 290 300 310 320 330
130 140 150 160 170 180
pF1KSD YAQATEALLKTGAAYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQV---AQKLA
:: :.: :.. : :: : :: : :..:.: : : : . . :.. .
NP_001 YAWAVE-LIRRGLAYVCH---QR-----GEELKGHNTLPSPWRDRPMEESLLLFEAMRKG
340 350 360 370 380
190 200 210 220 230
pF1KSD KDPKPAIRFRLEQVVPAFQ-DLVYGWNRHEVASVEGDPVIMKSDGFPTY-HLACVVDD-H
: . .:.. :. . : : .. :: . .::: . :. :. .
NP_001 KFSEGEATLRMKLVMEDGKMDPVAYRVKYTPHHRTGDKWCI----YPTYDYTHCLCDSIE
390 400 410 420 430
240 250 260 270 280 290
pF1KSD HMGISHVLRGSEWLVSTAKHLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHF
: :.: : .:. . .... : .:: :
NP_001 H--ITHSLCTKEFQARRSSYFWLCNALDVYCPVQWEYGRLNLHYAVVSKRKILQLVATGA
440 450 460 470 480 490
300 310 320 330 340 350
pF1KSD AADGFLPDSLLDIITNCGSGFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRL
NP_001 VRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPR
500 510 520 530 540 550
>>NP_005042 (OMIM: 603727,615760) glutamine--tRNA ligase (775 aa)
initn: 158 init1: 158 opt: 161 Z-score: 180.4 bits: 43.6 E(85289): 0.0026
Smith-Waterman score: 209; 27.7% identity (50.0% similar) in 242 aa overlap (34-269:261-479)
10 20 30 40 50 60
pF1KSD LLRRLLQRERPSAASGRPVGRREANLGTDAGVAVRVRFAPSPTGFLHLGGLRTALYNYIF
: ::.:: : :.:.::.: .. .:. .
NP_005 FHKPGENYKTPGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGY
240 250 260 270 280 290
70 80 90 100 110 120
pF1KSD AKKYQGSFILRLEDTDQTRVVPGAAENIEDMLEWAGIPPDESPRRGGPAGPYQQSQRLEL
:: .: .::..::. . : ::. : : : . : .. .:
NP_005 AKANNGICFLRFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVT--------YASDYFDQL
300 310 320 330 340
130 140 150 160 170 180
pF1KSD YAQATEALLKTGAAYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQV---AQKLA
:: :.: :.. : :: : :: : :..:.: : : : . . :.. .
NP_005 YAWAVE-LIRRGLAYVCH---QR-----GEELKGHNTLPSPWRDRPMEESLLLFEAMRKG
350 360 370 380 390
190 200 210 220 230
pF1KSD KDPKPAIRFRLEQVVPAFQ-DLVYGWNRHEVASVEGDPVIMKSDGFPTY-HLACVVDD-H
: . .:.. :. . : : .. :: . .::: . :. :. .
NP_005 KFSEGEATLRMKLVMEDGKMDPVAYRVKYTPHHRTGDKWCI----YPTYDYTHCLCDSIE
400 410 420 430 440
240 250 260 270 280 290
pF1KSD HMGISHVLRGSEWLVSTAKHLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHF
: :.: : .:. . .... : .:: :
NP_005 H--ITHSLCTKEFQARRSSYFWLCNALDVYCPVQWEYGRLNLHYAVVSKRKILQLVATGA
450 460 470 480 490 500
300 310 320 330 340 350
pF1KSD AADGFLPDSLLDIITNCGSGFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRL
NP_005 VRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPR
510 520 530 540 550 560
523 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 07:53:20 2016 done: Thu Nov 3 07:53:21 2016
Total Scan time: 10.970 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]