Result of FASTA (ccds) for
pF1KSDA1886
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1886, 920 aa
1>>>pF1KSDA1886 920 - 920 aa - 920 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.5917+/-0.00107; mu= -4.1830+/- 0.065
mean_var=459.2537+/-95.381, 0's: 0 Z-trim(115.7): 36 B-trim: 159 in 1/52
Lambda= 0.059848
statistics sampled from 16281 (16313) to 16281 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.778), E-opt: 0.2 (0.501), width: 16
Scan time: 5.610
The best scores are: opt bits E(32554)
CCDS43576.1 ZMIZ2 gene_id:83637|Hs108|chr7 ( 920) 6402 567.8 3.2e-161
CCDS43577.1 ZMIZ2 gene_id:83637|Hs108|chr7 ( 894) 4092 368.4 3.5e-101
CCDS75591.1 ZMIZ2 gene_id:83637|Hs108|chr7 ( 862) 4079 367.2 7.4e-101
CCDS7357.1 ZMIZ1 gene_id:57178|Hs108|chr10 (1067) 3374 306.4 1.8e-82
>>CCDS43576.1 ZMIZ2 gene_id:83637|Hs108|chr7 (920 aa)
initn: 6402 init1: 6402 opt: 6402 Z-score: 3007.8 bits: 567.8 E(32554): 3.2e-161
Smith-Waterman score: 6402; 99.9% identity (100.0% similar) in 920 aa overlap (1-920:1-920)
10 20 30 40 50 60
pF1KSD MNSMNPMKPALPPAPHGDGSFAYESVPWQQSATQPAGSLSVVTTVWGVGNATQSQVLGNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MNSMNPMKPALPPAPHGDGSFAYESVPWQQSATQPAGSLSVVTTVWGVGNATQSQVLGNP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD MGPAGSPSGSSMMPGVAGGSSALTSPQCLGQQAFAEGGANKGYVQQGVYSRGGYPGAPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MGPAGSPSGSSMMPGVAGGSSALTSPQCLGQQAFAEGGANKGYVQQGVYSRGGYPGAPGF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD TTGYAGGPGGLGLPSHAARPSTDFTQAAAAAAVAAAAATATATATATVAALQEKQSQELS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TTGYAGGPGGLGLPSHAARPSTDFTQAAAAAAVAAAAATATATATATVAALQEKQSQELS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD QYGAMGAGQSFNSQFLQHGGPRGPSVPAGMNPTGIGGVMGPSGLSPLAMNPTRAAGMTPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QYGAMGAGQSFNSQFLQHGGPRGPSVPAGMNPTGIGGVMGPSGLSPLAMNPTRAAGMTPL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD YAGQRLPQHGYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YAGQRLPQHGYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD PSPSYPGHRLPLQQGMTQSLSVPGPTGLHYKPTEQFNGQGASFNGGSVSYSQPGLSGPTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PSPSYPGHRLPLQQGMTQSLSVPGPTGLHYKPTEQFNGQGASFNGGSVSYSQPGLSGPTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SIPGYPSSPLPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSFHSSPSGSGPCDE
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
CCDS43 SIPGYPSSPLPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSLHSSPSGSGPCDE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD LRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD TNWPASVQVSVNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TNWPASVQVSVNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD VHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLKC
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD PITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGI
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD LIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPALKRCRTVSPAHVLMPSVMEMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPALKRCRTVSPAHVLMPSVMEMI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD AALGPGAAPFAPLQPPSVPAPSDYPGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AALGPGAAPFAPLQPPSVPAPSDYPGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPPP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD ISYQSDIPSSLLTSEKSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGPQLHHSNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ISYQSDIPSSLLTSEKSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGPQLHHSNP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD PPASRQSLGQASLGPTGELAFSPATGVMGPPSMSGAGEAPEPALDLLPELTNPDELLSYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PPASRQSLGQASLGPTGELAFSPATGVMGPPSMSGAGEAPEPALDLLPELTNPDELLSYL
850 860 870 880 890 900
910 920
pF1KSD GPPDLPTNNNDDLLSLFENN
::::::::::::::::::::
CCDS43 GPPDLPTNNNDDLLSLFENN
910 920
>>CCDS43577.1 ZMIZ2 gene_id:83637|Hs108|chr7 (894 aa)
initn: 3941 init1: 3941 opt: 4092 Z-score: 1930.0 bits: 368.4 E(32554): 3.5e-101
Smith-Waterman score: 6162; 97.1% identity (97.2% similar) in 920 aa overlap (1-920:1-894)
10 20 30 40 50 60
pF1KSD MNSMNPMKPALPPAPHGDGSFAYESVPWQQSATQPAGSLSVVTTVWGVGNATQSQVLGNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MNSMNPMKPALPPAPHGDGSFAYESVPWQQSATQPAGSLSVVTTVWGVGNATQSQVLGNP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD MGPAGSPSGSSMMPGVAGGSSALTSPQCLGQQAFAEGGANKGYVQQGVYSRGGYPGAPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MGPAGSPSGSSMMPGVAGGSSALTSPQCLGQQAFAEGGANKGYVQQGVYSRGGYPGAPGF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD TTGYAGGPGGLGLPSHAARPSTDFTQAAAAAAVAAAAATATATATATVAALQEKQSQELS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TTGYAGGPGGLGLPSHAARPSTDFTQAAAAAAVAAAAATATATATATVAALQEKQSQELS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD QYGAMGAGQSFNSQFLQHGGPRGPSVPAGMNPTGIGGVMGPSGLSPLAMNPTRAAGMTPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QYGAMGAGQSFNSQFLQHGGPRGPSVPAGMNPTGIGGVMGPSGLSPLAMNPTRAAGMTPL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD YAGQRLPQHGYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YAGQRLPQHGYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD PSPSYPGHRLPLQQGMTQSLSVPGPTGLHYKPTEQFNGQGASFNGGSVSYSQPGLSGPTR
::::::::::::::::::::::::::::::::: :
CCDS43 PSPSYPGHRLPLQQGMTQSLSVPGPTGLHYKPT--------------------------R
310 320 330
370 380 390 400 410 420
pF1KSD SIPGYPSSPLPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSFHSSPSGSGPCDE
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
CCDS43 SIPGYPSSPLPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSLHSSPSGSGPCDE
340 350 360 370 380 390
430 440 450 460 470 480
pF1KSD LRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMN
400 410 420 430 440 450
490 500 510 520 530 540
pF1KSD TNWPASVQVSVNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TNWPASVQVSVNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQL
460 470 480 490 500 510
550 560 570 580 590 600
pF1KSD VHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLKC
520 530 540 550 560 570
610 620 630 640 650 660
pF1KSD PITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGI
580 590 600 610 620 630
670 680 690 700 710 720
pF1KSD LIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPALKRCRTVSPAHVLMPSVMEMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPALKRCRTVSPAHVLMPSVMEMI
640 650 660 670 680 690
730 740 750 760 770 780
pF1KSD AALGPGAAPFAPLQPPSVPAPSDYPGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AALGPGAAPFAPLQPPSVPAPSDYPGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPPP
700 710 720 730 740 750
790 800 810 820 830 840
pF1KSD ISYQSDIPSSLLTSEKSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGPQLHHSNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ISYQSDIPSSLLTSEKSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGPQLHHSNP
760 770 780 790 800 810
850 860 870 880 890 900
pF1KSD PPASRQSLGQASLGPTGELAFSPATGVMGPPSMSGAGEAPEPALDLLPELTNPDELLSYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PPASRQSLGQASLGPTGELAFSPATGVMGPPSMSGAGEAPEPALDLLPELTNPDELLSYL
820 830 840 850 860 870
910 920
pF1KSD GPPDLPTNNNDDLLSLFENN
::::::::::::::::::::
CCDS43 GPPDLPTNNNDDLLSLFENN
880 890
>>CCDS75591.1 ZMIZ2 gene_id:83637|Hs108|chr7 (862 aa)
initn: 4401 init1: 3941 opt: 4079 Z-score: 1924.2 bits: 367.2 E(32554): 7.4e-101
Smith-Waterman score: 5872; 93.6% identity (93.7% similar) in 920 aa overlap (1-920:1-862)
10 20 30 40 50 60
pF1KSD MNSMNPMKPALPPAPHGDGSFAYESVPWQQSATQPAGSLSVVTTVWGVGNATQSQVLGNP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MNSMNPMKPALPPAPHGDGSFAYESVPWQQSATQPAGSLSVVTTVWGVGNATQSQ-----
10 20 30 40 50
70 80 90 100 110 120
pF1KSD MGPAGSPSGSSMMPGVAGGSSALTSPQCLGQQAFAEGGANKGYVQQGVYSRGGYPGAPGF
:::::::::::::::::::::::::::::::::
CCDS75 ---------------------------CLGQQAFAEGGANKGYVQQGVYSRGGYPGAPGF
60 70 80
130 140 150 160 170 180
pF1KSD TTGYAGGPGGLGLPSHAARPSTDFTQAAAAAAVAAAAATATATATATVAALQEKQSQELS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 TTGYAGGPGGLGLPSHAARPSTDFTQAAAAAAVAAAAATATATATATVAALQEKQSQELS
90 100 110 120 130 140
190 200 210 220 230 240
pF1KSD QYGAMGAGQSFNSQFLQHGGPRGPSVPAGMNPTGIGGVMGPSGLSPLAMNPTRAAGMTPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 QYGAMGAGQSFNSQFLQHGGPRGPSVPAGMNPTGIGGVMGPSGLSPLAMNPTRAAGMTPL
150 160 170 180 190 200
250 260 270 280 290 300
pF1KSD YAGQRLPQHGYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 YAGQRLPQHGYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPA
210 220 230 240 250 260
310 320 330 340 350 360
pF1KSD PSPSYPGHRLPLQQGMTQSLSVPGPTGLHYKPTEQFNGQGASFNGGSVSYSQPGLSGPTR
::::::::::::::::::::::::::::::::: :
CCDS75 PSPSYPGHRLPLQQGMTQSLSVPGPTGLHYKPT--------------------------R
270 280 290 300
370 380 390 400 410 420
pF1KSD SIPGYPSSPLPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSFHSSPSGSGPCDE
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
CCDS75 SIPGYPSSPLPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSLHSSPSGSGPCDE
310 320 330 340 350 360
430 440 450 460 470 480
pF1KSD LRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMN
370 380 390 400 410 420
490 500 510 520 530 540
pF1KSD TNWPASVQVSVNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 TNWPASVQVSVNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQL
430 440 450 460 470 480
550 560 570 580 590 600
pF1KSD VHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLKC
490 500 510 520 530 540
610 620 630 640 650 660
pF1KSD PITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 PITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGI
550 560 570 580 590 600
670 680 690 700 710 720
pF1KSD LIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPALKRCRTVSPAHVLMPSVMEMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPALKRCRTVSPAHVLMPSVMEMI
610 620 630 640 650 660
730 740 750 760 770 780
pF1KSD AALGPGAAPFAPLQPPSVPAPSDYPGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 AALGPGAAPFAPLQPPSVPAPSDYPGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPPP
670 680 690 700 710 720
790 800 810 820 830 840
pF1KSD ISYQSDIPSSLLTSEKSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGPQLHHSNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ISYQSDIPSSLLTSEKSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGPQLHHSNP
730 740 750 760 770 780
850 860 870 880 890 900
pF1KSD PPASRQSLGQASLGPTGELAFSPATGVMGPPSMSGAGEAPEPALDLLPELTNPDELLSYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 PPASRQSLGQASLGPTGELAFSPATGVMGPPSMSGAGEAPEPALDLLPELTNPDELLSYL
790 800 810 820 830 840
910 920
pF1KSD GPPDLPTNNNDDLLSLFENN
::::::::::::::::::::
CCDS75 GPPDLPTNNNDDLLSLFENN
850 860
>>CCDS7357.1 ZMIZ1 gene_id:57178|Hs108|chr10 (1067 aa)
initn: 2968 init1: 1001 opt: 3374 Z-score: 1594.0 bits: 306.4 E(32554): 1.8e-82
Smith-Waterman score: 3791; 61.3% identity (79.1% similar) in 959 aa overlap (1-920:129-1067)
10 20 30
pF1KSD MNSMNPMKPALPPAPHGDGSFAYESVPWQQ
..::. :::.: :.:::: :.::::::
CCDS73 WCEELGRLLLLRHQKSRQSDPPGKLPMQPPLSSMSSMKPTL---SHSDGSFPYDSVPWQQ
100 110 120 130 140 150
40 50 60 70 80
pF1KSD SATQPAGSLSVVTTVWGVGNATQSQVLGNPMGPAGSP---SGSSMMPGVAGGSSALTSPQ
...:: :::::::::::: :..:::::::::. :..: .:. : :.. .. .:.:::
CCDS73 NTNQPPGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQ
160 170 180 190 200 210
90 100 110 120 130 140
pF1KSD CLGQQA-F-AEGGANKGYVQQGVYSRGGYPGAPGFTTGYAGGPG---GLGLPSHAARPST
::: : :..: . :.::..:.: .:::. :: ..: :::. :.:.: :. :: .
CCDS73 FAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHT-RPPA
220 230 240 250 260 270
150 160 170 180 190
pF1KSD DFTQ---AAAAAAVAAAAATATATATATVAALQEKQSQELSQYGAMGAGQSFNSQFLQHG
:::: ::::::::::::::::::::::::::: :.....::: :: :..::::...
CCDS73 DFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQP
280 290 300 310 320 330
200 210 220 230 240 250
pF1KSD GPRGPSVPAG-MNPTGIGGVMGPSGLS--PLAMNPTRAAGMTPLYA-GQRLPQHGYPGPP
:::::. .: :::..... : :::.: :..:: : :..:. . :::.::. ::::
CCDS73 GPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGP-
340 350 360 370 380 390
260 270 280 290 300
pF1KSD QAQPLPRQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPAP-------SPSYPGH
. : :: :..:: :::. . ::.:.. :: .::: ::: ::.:::.
CCDS73 RPQSLPIQNIKRP----YPGEPNYGNQQYGPNS-QFPTQPGQYPAPNPPRPLTSPNYPGQ
400 410 420 430 440
310 320 330 340 350 360
pF1KSD RLPLQQGMTQSLSVPGPT---GLHYKPTEQFNGQGASFNGGSVS-YSQPGLSGPTRSIP-
:.: : . : : :: : .::: ::::::. .:.:.: : ::: ... : : .:
CCDS73 RMPSQPSSGQ---YPPPTVNMGQYYKP-EQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPV
450 460 470 480 490 500
370 380 390 400 410 420
pF1KSD -GYPSSPLPGNPTPPMTPSSSVP-YMSPNQEVKSPFLPDLKPNLNSFHSSPSGSGPCDEL
.:: ::.::::::::::.::.: :.::.:.:: :: ::.:::.... :.. . :::
CCDS73 ANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPANHN--DEL
510 520 530 540 550 560
430 440 450 460 470 480
pF1KSD RLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMNT
:::::::::::::::::.::::::::::.:: .:..::. : ::::::::::::::::::
CCDS73 RLTFPVRDGVVLEPFRLEHNLAVSNHVFHLRPTVHQTLMWRSDLELQFKCYHHEDRQMNT
570 580 590 600 610 620
490 500 510 520 530 540
pF1KSD NWPASVQVSVNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQLV
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::
CCDS73 NWPASVQVSVNATPLTIERGDNKTSHKPLHLKHVCQPGRNTIQITVTACCCSHLFVLQLV
630 640 650 660 670 680
550 560 570 580 590 600
pF1KSD HRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSS-GTIPGTPGPNGEDGVEQTAIKVSLKC
::::::::::::::::::::::::::::::::: .. :. :::::::::::::::::
CCDS73 HRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSVAASSGNTTLNGEDGVEQTAIKVSLKC
690 700 710 720 730 740
610 620 630 640 650 660
pF1KSD PITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGI
::::::::::::::::.:.:::::::::::::::::::::::::::::::::::::: ::
CCDS73 PITFRRIQLPARGHDCKHVQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMWGI
750 760 770 780 790 800
670 680 690 700 710 720
pF1KSD LIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPALKRCRTVSPAHVLMPSVMEMI
: ::.:..::.::::::::.:::.: :.:::..::: :: .:.::....::.:::::
CCDS73 LNAIQHSEFEEVTIDPTCSWRPVPIKSDLHIKDDPDGIPSKRFKTMSPSQMIMPNVMEMI
810 820 830 840 850 860
730 740 750 760 770
pF1KSD AALGPGAAPFAPLQPPSVPAPS-DYPGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPP
:::::: .:. :: :: . : :: .::... : :.: .:: .:. .. .: :::
CCDS73 AALGPGPSPY-PLPPPPGGTNSNDYSSQGNNYQGHGNF--DFPHGNPGGTSMNDFMHGPP
870 880 890 900 910
780 790 800 810 820 830
pF1KSD PISYQSDIPSSLLTSEKSTACLPSQ--MAPAGHLDPTHNPGTPGLHTSNLGAPPGPQLHH
.:. :.:... . :: . : : : :: : : :::. . .. :: :::
CCDS73 QLSHPPDMPNNMAALEKPLSH-PMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHH
920 930 940 950 960 970
840 850 860 870 880 890
pF1KSD SN--PPPAS---RQSLGQA-SLGPTGELAFSPATGVMGPPSMSGAGEAPEPALDLLPELT
:. ::: : :: : : : ..:.:.:.... : . .::.. :::.::::::::
CCDS73 SGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEPSLDLLPELT
980 990 1000 1010 1020 1030
900 910 920
pF1KSD NPDELLSYLGPPDLPTNNNDDLLSLFENN
::::::::: :::::.:.:::::::::::
CCDS73 NPDELLSYLDPPDLPSNSNDDLLSLFENN
1040 1050 1060
920 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 07:37:27 2016 done: Thu Nov 3 07:37:28 2016
Total Scan time: 5.610 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]