Result of FASTA (omim) for
pF1KSDA1869
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1869, 930 aa
1>>>pF1KSDA1869 930 - 930 aa - 930 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.8115+/-0.000442; mu= -2.7139+/- 0.027
mean_var=416.1509+/-87.550, 0's: 0 Z-trim(122.7): 183 B-trim: 1178 in 2/59
Lambda= 0.062871
statistics sampled from 41112 (41317) to 41112 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.772), E-opt: 0.2 (0.484), width: 16
Scan time: 17.440
The best scores are: opt bits E(85289)
XP_016855568 (OMIM: 609294) PREDICTED: semaphorin- ( 930) 6452 600.4 1.4e-170
XP_016855567 (OMIM: 609294) PREDICTED: semaphorin- ( 930) 6452 600.4 1.4e-170
NP_112175 (OMIM: 609294) semaphorin-6C isoform 2 p ( 930) 6452 600.4 1.4e-170
XP_016855564 (OMIM: 609294) PREDICTED: semaphorin- ( 962) 4029 380.6 2e-104
XP_005244892 (OMIM: 609294) PREDICTED: semaphorin- ( 962) 4029 380.6 2e-104
XP_016855566 (OMIM: 609294) PREDICTED: semaphorin- ( 962) 4029 380.6 2e-104
NP_001171532 (OMIM: 609294) semaphorin-6C isoform ( 962) 4029 380.6 2e-104
XP_016855565 (OMIM: 609294) PREDICTED: semaphorin- ( 962) 4029 380.6 2e-104
XP_016855570 (OMIM: 609294) PREDICTED: semaphorin- ( 922) 2538 245.3 1e-63
NP_001171533 (OMIM: 609294) semaphorin-6C isoform ( 922) 2538 245.3 1e-63
XP_016855569 (OMIM: 609294) PREDICTED: semaphorin- ( 922) 2538 245.3 1e-63
XP_016855571 (OMIM: 609294) PREDICTED: semaphorin- ( 697) 2445 236.8 2.9e-61
NP_001185928 (OMIM: 609295) semaphorin-6D isoform (1011) 2147 209.9 5.1e-53
NP_065909 (OMIM: 609295) semaphorin-6D isoform 1 p (1011) 2147 209.9 5.1e-53
XP_011520382 (OMIM: 609295) PREDICTED: semaphorin- (1011) 2147 209.9 5.1e-53
NP_705870 (OMIM: 609295) semaphorin-6D isoform 3 p (1017) 2146 209.8 5.5e-53
XP_011520381 (OMIM: 609295) PREDICTED: semaphorin- (1017) 2146 209.8 5.5e-53
XP_016878109 (OMIM: 609295) PREDICTED: semaphorin- (1017) 2146 209.8 5.5e-53
XP_016878110 (OMIM: 609295) PREDICTED: semaphorin- ( 998) 2038 200.0 4.8e-50
XP_011520383 (OMIM: 609295) PREDICTED: semaphorin- ( 998) 2038 200.0 4.8e-50
NP_705869 (OMIM: 609295) semaphorin-6D isoform 2 p ( 998) 2038 200.0 4.8e-50
NP_705872 (OMIM: 609295) semaphorin-6D isoform 5 p ( 597) 2021 198.3 9.9e-50
XP_005272099 (OMIM: 605885) PREDICTED: semaphorin- ( 975) 2023 198.7 1.2e-49
XP_005254746 (OMIM: 609295) PREDICTED: semaphorin- (1054) 2021 198.5 1.5e-49
XP_011520379 (OMIM: 609295) PREDICTED: semaphorin- (1054) 2021 198.5 1.5e-49
NP_705871 (OMIM: 609295) semaphorin-6D isoform 4 p (1073) 2015 198.0 2.2e-49
XP_005254744 (OMIM: 609295) PREDICTED: semaphorin- (1073) 2015 198.0 2.2e-49
XP_016878108 (OMIM: 609295) PREDICTED: semaphorin- (1030) 2001 196.7 5e-49
XP_011520380 (OMIM: 609295) PREDICTED: semaphorin- (1030) 2001 196.7 5e-49
XP_011520378 (OMIM: 609295) PREDICTED: semaphorin- (1067) 2001 196.7 5.2e-49
XP_016878107 (OMIM: 609295) PREDICTED: semaphorin- (1067) 2001 196.7 5.2e-49
XP_005254742 (OMIM: 609295) PREDICTED: semaphorin- (1086) 2001 196.7 5.2e-49
XP_016878106 (OMIM: 609295) PREDICTED: semaphorin- (1086) 2001 196.7 5.2e-49
XP_005254743 (OMIM: 609295) PREDICTED: semaphorin- (1086) 2001 196.7 5.2e-49
XP_011520377 (OMIM: 609295) PREDICTED: semaphorin- (1086) 2001 196.7 5.2e-49
NP_115484 (OMIM: 608873) semaphorin-6B precursor [ ( 888) 1909 188.3 1.5e-46
XP_011525942 (OMIM: 608873) PREDICTED: semaphorin- ( 894) 1866 184.4 2.2e-45
XP_011525941 (OMIM: 608873) PREDICTED: semaphorin- ( 894) 1866 184.4 2.2e-45
NP_065847 (OMIM: 605885) semaphorin-6A isoform 2 p (1030) 1851 183.1 6.3e-45
NP_001287709 (OMIM: 605885) semaphorin-6A isoform (1047) 1851 183.1 6.4e-45
XP_016865164 (OMIM: 605885) PREDICTED: semaphorin- (1052) 1851 183.1 6.4e-45
XP_006714726 (OMIM: 605885) PREDICTED: semaphorin- (1052) 1851 183.1 6.4e-45
NP_079242 (OMIM: 609295) semaphorin-6D isoform 6 p ( 476) 1718 170.7 1.6e-41
XP_011525943 (OMIM: 608873) PREDICTED: semaphorin- ( 578) 1713 170.3 2.5e-41
XP_016865165 (OMIM: 605885) PREDICTED: semaphorin- ( 904) 1523 153.3 5.2e-36
NP_001305729 (OMIM: 601124) semaphorin-3F isoform ( 754) 960 102.1 1.1e-20
XP_005265439 (OMIM: 601124) PREDICTED: semaphorin- ( 754) 960 102.1 1.1e-20
NP_001305727 (OMIM: 601124) semaphorin-3F isoform ( 686) 953 101.4 1.6e-20
XP_006715902 (OMIM: 603961,614897) PREDICTED: sema ( 771) 849 92.1 1.2e-17
XP_016867162 (OMIM: 603961,614897) PREDICTED: sema ( 771) 849 92.1 1.2e-17
>>XP_016855568 (OMIM: 609294) PREDICTED: semaphorin-6C i (930 aa)
initn: 6452 init1: 6452 opt: 6452 Z-score: 3183.5 bits: 600.4 E(85289): 1.4e-170
Smith-Waterman score: 6452; 100.0% identity (100.0% similar) in 930 aa overlap (1-930:1-930)
10 20 30 40 50 60
pF1KSD MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYGVRRDLPPASASRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYGVRRDLPPASASRS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD VPIPLLLASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPIPLLLASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD GPEPPPPSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRAAGDPWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPEPPPPSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRAAGDPWE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD WNQNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WNQNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD RKGAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RKGAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD APRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPEGYRGRALKRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPEGYRGRALKRV
850 860 870 880 890 900
910 920 930
pF1KSD DVEKPQLSLKPPLVGPSSRQAVPNGGRFNF
::::::::::::::::::::::::::::::
XP_016 DVEKPQLSLKPPLVGPSSRQAVPNGGRFNF
910 920 930
>>XP_016855567 (OMIM: 609294) PREDICTED: semaphorin-6C i (930 aa)
initn: 6452 init1: 6452 opt: 6452 Z-score: 3183.5 bits: 600.4 E(85289): 1.4e-170
Smith-Waterman score: 6452; 100.0% identity (100.0% similar) in 930 aa overlap (1-930:1-930)
10 20 30 40 50 60
pF1KSD MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYGVRRDLPPASASRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYGVRRDLPPASASRS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD VPIPLLLASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPIPLLLASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD GPEPPPPSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRAAGDPWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPEPPPPSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRAAGDPWE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD WNQNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WNQNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD RKGAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RKGAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD APRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPEGYRGRALKRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPEGYRGRALKRV
850 860 870 880 890 900
910 920 930
pF1KSD DVEKPQLSLKPPLVGPSSRQAVPNGGRFNF
::::::::::::::::::::::::::::::
XP_016 DVEKPQLSLKPPLVGPSSRQAVPNGGRFNF
910 920 930
>>NP_112175 (OMIM: 609294) semaphorin-6C isoform 2 precu (930 aa)
initn: 6452 init1: 6452 opt: 6452 Z-score: 3183.5 bits: 600.4 E(85289): 1.4e-170
Smith-Waterman score: 6452; 100.0% identity (100.0% similar) in 930 aa overlap (1-930:1-930)
10 20 30 40 50 60
pF1KSD MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYGVRRDLPPASASRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYGVRRDLPPASASRS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD VPIPLLLASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 VPIPLLLASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD GPEPPPPSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRAAGDPWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 GPEPPPPSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRAAGDPWE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD WNQNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 WNQNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD RKGAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 RKGAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD APRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPEGYRGRALKRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 APRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPEGYRGRALKRV
850 860 870 880 890 900
910 920 930
pF1KSD DVEKPQLSLKPPLVGPSSRQAVPNGGRFNF
::::::::::::::::::::::::::::::
NP_112 DVEKPQLSLKPPLVGPSSRQAVPNGGRFNF
910 920 930
>>XP_016855564 (OMIM: 609294) PREDICTED: semaphorin-6C i (962 aa)
initn: 6438 init1: 4009 opt: 4029 Z-score: 1995.6 bits: 380.6 E(85289): 2e-104
Smith-Waterman score: 6378; 96.7% identity (96.7% similar) in 962 aa overlap (1-930:1-962)
10 20 30 40 50 60
pF1KSD MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
490 500 510 520 530 540
550 560 570 580
pF1KSD SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAY--------------
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYVLPGPGPSPGTPSP
550 560 570 580 590 600
590 600 610 620
pF1KSD ------------------GVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
::::::::::::::::::::::::::::::::::::::::::
XP_016 PSDAHPRPQSSTLGVHTRGVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
610 620 630 640 650 660
630 640 650 660 670 680
pF1KSD CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
670 680 690 700 710 720
690 700 710 720 730 740
pF1KSD GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
730 740 750 760 770 780
750 760 770 780 790 800
pF1KSD LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
790 800 810 820 830 840
810 820 830 840 850 860
pF1KSD PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
850 860 870 880 890 900
870 880 890 900 910 920
pF1KSD SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
910 920 930 940 950 960
930
pF1KSD NF
::
XP_016 NF
>>XP_005244892 (OMIM: 609294) PREDICTED: semaphorin-6C i (962 aa)
initn: 6438 init1: 4009 opt: 4029 Z-score: 1995.6 bits: 380.6 E(85289): 2e-104
Smith-Waterman score: 6378; 96.7% identity (96.7% similar) in 962 aa overlap (1-930:1-962)
10 20 30 40 50 60
pF1KSD MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
490 500 510 520 530 540
550 560 570 580
pF1KSD SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAY--------------
::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYVLPGPGPSPGTPSP
550 560 570 580 590 600
590 600 610 620
pF1KSD ------------------GVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
::::::::::::::::::::::::::::::::::::::::::
XP_005 PSDAHPRPQSSTLGVHTRGVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
610 620 630 640 650 660
630 640 650 660 670 680
pF1KSD CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
670 680 690 700 710 720
690 700 710 720 730 740
pF1KSD GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
730 740 750 760 770 780
750 760 770 780 790 800
pF1KSD LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
790 800 810 820 830 840
810 820 830 840 850 860
pF1KSD PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
850 860 870 880 890 900
870 880 890 900 910 920
pF1KSD SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
910 920 930 940 950 960
930
pF1KSD NF
::
XP_005 NF
>>XP_016855566 (OMIM: 609294) PREDICTED: semaphorin-6C i (962 aa)
initn: 6438 init1: 4009 opt: 4029 Z-score: 1995.6 bits: 380.6 E(85289): 2e-104
Smith-Waterman score: 6378; 96.7% identity (96.7% similar) in 962 aa overlap (1-930:1-962)
10 20 30 40 50 60
pF1KSD MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
490 500 510 520 530 540
550 560 570 580
pF1KSD SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAY--------------
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYVLPGPGPSPGTPSP
550 560 570 580 590 600
590 600 610 620
pF1KSD ------------------GVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
::::::::::::::::::::::::::::::::::::::::::
XP_016 PSDAHPRPQSSTLGVHTRGVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
610 620 630 640 650 660
630 640 650 660 670 680
pF1KSD CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
670 680 690 700 710 720
690 700 710 720 730 740
pF1KSD GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
730 740 750 760 770 780
750 760 770 780 790 800
pF1KSD LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
790 800 810 820 830 840
810 820 830 840 850 860
pF1KSD PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
850 860 870 880 890 900
870 880 890 900 910 920
pF1KSD SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
910 920 930 940 950 960
930
pF1KSD NF
::
XP_016 NF
>>NP_001171532 (OMIM: 609294) semaphorin-6C isoform 1 pr (962 aa)
initn: 6438 init1: 4009 opt: 4029 Z-score: 1995.6 bits: 380.6 E(85289): 2e-104
Smith-Waterman score: 6378; 96.7% identity (96.7% similar) in 962 aa overlap (1-930:1-962)
10 20 30 40 50 60
pF1KSD MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
490 500 510 520 530 540
550 560 570 580
pF1KSD SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAY--------------
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYVLPGPGPSPGTPSP
550 560 570 580 590 600
590 600 610 620
pF1KSD ------------------GVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
::::::::::::::::::::::::::::::::::::::::::
NP_001 PSDAHPRPQSSTLGVHTRGVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
610 620 630 640 650 660
630 640 650 660 670 680
pF1KSD CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
670 680 690 700 710 720
690 700 710 720 730 740
pF1KSD GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
730 740 750 760 770 780
750 760 770 780 790 800
pF1KSD LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
790 800 810 820 830 840
810 820 830 840 850 860
pF1KSD PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
850 860 870 880 890 900
870 880 890 900 910 920
pF1KSD SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
910 920 930 940 950 960
930
pF1KSD NF
::
NP_001 NF
>>XP_016855565 (OMIM: 609294) PREDICTED: semaphorin-6C i (962 aa)
initn: 6438 init1: 4009 opt: 4029 Z-score: 1995.6 bits: 380.6 E(85289): 2e-104
Smith-Waterman score: 6378; 96.7% identity (96.7% similar) in 962 aa overlap (1-930:1-962)
10 20 30 40 50 60
pF1KSD MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
490 500 510 520 530 540
550 560 570 580
pF1KSD SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAY--------------
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYVLPGPGPSPGTPSP
550 560 570 580 590 600
590 600 610 620
pF1KSD ------------------GVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
::::::::::::::::::::::::::::::::::::::::::
XP_016 PSDAHPRPQSSTLGVHTRGVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
610 620 630 640 650 660
630 640 650 660 670 680
pF1KSD CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
670 680 690 700 710 720
690 700 710 720 730 740
pF1KSD GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
730 740 750 760 770 780
750 760 770 780 790 800
pF1KSD LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
790 800 810 820 830 840
810 820 830 840 850 860
pF1KSD PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
850 860 870 880 890 900
870 880 890 900 910 920
pF1KSD SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
910 920 930 940 950 960
930
pF1KSD NF
::
XP_016 NF
>>XP_016855570 (OMIM: 609294) PREDICTED: semaphorin-6C i (922 aa)
initn: 4942 init1: 2513 opt: 2538 Z-score: 1264.9 bits: 245.3 E(85289): 1e-63
Smith-Waterman score: 6023; 92.5% identity (92.5% similar) in 962 aa overlap (1-930:1-922)
10 20 30 40 50 60
pF1KSD MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
::: :::::::::::::::::
XP_016 FAE----------------------------------------PHFVQALEHGDHVYFFF
190 200
250 260 270 280 290 300
pF1KSD REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
210 220 230 240 250 260
310 320 330 340 350 360
pF1KSD QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
270 280 290 300 310 320
370 380 390 400 410 420
pF1KSD SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
330 340 350 360 370 380
430 440 450 460 470 480
pF1KSD ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
390 400 410 420 430 440
490 500 510 520 530 540
pF1KSD GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
450 460 470 480 490 500
550 560 570 580
pF1KSD SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAY--------------
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYVLPGPGPSPGTPSP
510 520 530 540 550 560
590 600 610 620
pF1KSD ------------------GVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
::::::::::::::::::::::::::::::::::::::::::
XP_016 PSDAHPRPQSSTLGVHTRGVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
570 580 590 600 610 620
630 640 650 660 670 680
pF1KSD CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
630 640 650 660 670 680
690 700 710 720 730 740
pF1KSD GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
690 700 710 720 730 740
750 760 770 780 790 800
pF1KSD LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
750 760 770 780 790 800
810 820 830 840 850 860
pF1KSD PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
810 820 830 840 850 860
870 880 890 900 910 920
pF1KSD SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
870 880 890 900 910 920
930
pF1KSD NF
::
XP_016 NF
>>NP_001171533 (OMIM: 609294) semaphorin-6C isoform 3 pr (922 aa)
initn: 4942 init1: 2513 opt: 2538 Z-score: 1264.9 bits: 245.3 E(85289): 1e-63
Smith-Waterman score: 6023; 92.5% identity (92.5% similar) in 962 aa overlap (1-930:1-922)
10 20 30 40 50 60
pF1KSD MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFF
::: :::::::::::::::::
NP_001 FAE----------------------------------------PHFVQALEHGDHVYFFF
190 200
250 260 270 280 290 300
pF1KSD REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
210 220 230 240 250 260
310 320 330 340 350 360
pF1KSD QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
270 280 290 300 310 320
370 380 390 400 410 420
pF1KSD SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSR
330 340 350 360 370 380
430 440 450 460 470 480
pF1KSD ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCS
390 400 410 420 430 440
490 500 510 520 530 540
pF1KSD GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
450 460 470 480 490 500
550 560 570 580
pF1KSD SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAY--------------
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYVLPGPGPSPGTPSP
510 520 530 540 550 560
590 600 610 620
pF1KSD ------------------GVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
::::::::::::::::::::::::::::::::::::::::::
NP_001 PSDAHPRPQSSTLGVHTRGVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCA
570 580 590 600 610 620
630 640 650 660 670 680
pF1KSD CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPE
630 640 650 660 670 680
690 700 710 720 730 740
pF1KSD GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRV
690 700 710 720 730 740
750 760 770 780 790 800
pF1KSD LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPS
750 760 770 780 790 800
810 820 830 840 850 860
pF1KSD PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVP
810 820 830 840 850 860
870 880 890 900 910 920
pF1KSD SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRF
870 880 890 900 910 920
930
pF1KSD NF
::
NP_001 NF
930 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 07:33:30 2016 done: Thu Nov 3 07:33:33 2016
Total Scan time: 17.440 Total Display time: 0.370
Function used was FASTA [36.3.4 Apr, 2011]