Result of FASTA (ccds) for
pF1KSDA1696
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1696, 634 aa
1>>>pF1KSDA1696 634 - 634 aa - 634 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.8343+/- 0.001; mu= -4.8572+/- 0.060
mean_var=306.0004+/-61.571, 0's: 0 Z-trim(114.2): 77 B-trim: 0 in 0/54
Lambda= 0.073318
statistics sampled from 14673 (14738) to 14673 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.759), E-opt: 0.2 (0.453), width: 16
Scan time: 4.060
The best scores are: opt bits E(32554)
CCDS31474.1 PHF21A gene_id:51317|Hs108|chr11 ( 634) 4167 454.5 2e-127
CCDS44578.1 PHF21A gene_id:51317|Hs108|chr11 ( 680) 2729 302.4 1.3e-81
CCDS56234.1 PHF21B gene_id:112885|Hs108|chr22 ( 477) 995 118.9 1.6e-26
CCDS46727.1 PHF21B gene_id:112885|Hs108|chr22 ( 489) 995 118.9 1.6e-26
CCDS14061.1 PHF21B gene_id:112885|Hs108|chr22 ( 531) 957 114.9 2.9e-25
CCDS63504.1 PHF21B gene_id:112885|Hs108|chr22 ( 327) 925 111.4 2e-24
>>CCDS31474.1 PHF21A gene_id:51317|Hs108|chr11 (634 aa)
initn: 4167 init1: 4167 opt: 4167 Z-score: 2401.1 bits: 454.5 E(32554): 2e-127
Smith-Waterman score: 4167; 100.0% identity (100.0% similar) in 634 aa overlap (1-634:1-634)
10 20 30 40 50 60
pF1KSD MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD KTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNTPVNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNTPVNL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD QTSSKVTGPGAEAVQIVAKNTVTLQVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QTSSKVTGPGAEAVQIVAKNTVTLQVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD AQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 AQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD MAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPKR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD EENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD TMHPGTRKRANEEHWPKGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TMHPGTRKRANEEHWPKGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGM
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD WICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 WICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD VKQLSNSISKCMEMKNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VKQLSNSISKCMEMKNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNG
550 560 570 580 590 600
610 620 630
pF1KSD PDCTPPANAATSTPAPSPSSQSCTANCNQGEETK
::::::::::::::::::::::::::::::::::
CCDS31 PDCTPPANAATSTPAPSPSSQSCTANCNQGEETK
610 620 630
>>CCDS44578.1 PHF21A gene_id:51317|Hs108|chr11 (680 aa)
initn: 2855 init1: 1515 opt: 2729 Z-score: 1578.6 bits: 302.4 E(32554): 1.3e-81
Smith-Waterman score: 3876; 92.0% identity (92.5% similar) in 666 aa overlap (1-619:1-665)
10 20 30 40 50 60
pF1KSD MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD KTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNTPVNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNTPVNL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD QTSSKVTGPGAEAVQIVAKNTVTLQVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPV
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
CCDS44 QTSSKVTGPGAEAVQIVAKNTVTL-VQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPV
190 200 210 220 230
250 260 270 280 290 300
pF1KSD AQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 AQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFP
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD MAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPKR
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD EENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNS
360 370 380 390 400 410
430
pF1KSD TMHPGTRKRA----------------------------NEEH-----WPK----------
:::::::::. ::. .:
CCDS44 TMHPGTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKTETTFTFPAPVQPVSLPSP
420 430 440 450 460 470
440 450 460 470 480 490
pF1KSD ----GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKK
480 490 500 510 520 530
500 510 520 530 540 550
pF1KSD EEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCME
540 550 560 570 580 590
560 570 580 590 600 610
pF1KSD MKNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MKNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATST
600 610 620 630 640 650
620 630
pF1KSD PAPSPSSQSCTANCNQGEETK
::::::
CCDS44 PAPSPSSQSCTANCNQGEETK
660 670 680
>>CCDS56234.1 PHF21B gene_id:112885|Hs108|chr22 (477 aa)
initn: 999 init1: 552 opt: 995 Z-score: 589.6 bits: 118.9 E(32554): 1.6e-26
Smith-Waterman score: 1010; 38.9% identity (68.9% similar) in 447 aa overlap (213-622:37-477)
190 200 210 220 230 240
pF1KSD SSKVTGPGAEAVQIVAKNTVTLQVQATPPQPIKVPQFIPPPRLTPR-PNFLPQVRPKPVA
:. :: ::. . ::::::: .
CCDS56 NGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLI
10 20 30 40 50 60
250 260 270 280 290
pF1KSD QNNIPIAPAP--PPMLAAPQLIQRPVMLTKFTPT-TLPTSQNSIHPVRVVNGQTATIAKT
...:.::. :: : .:. .... .:. .:::..:.. : . ..: ..:.
CCDS56 PDSLPVAPGRDRPP--KQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQALAEP
70 80 90 100 110 120
300 310 320
pF1KSD FPMAQ-LTS------IVIATPGTRLA-GPQT----------VQ-----------LSKPSL
.:. :.: :. ..:.. : .:.: :: . .:..
CCDS56 AALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKVIIIQPQV
130 140 150 160 170 180
330 340 350 360 370 380
pF1KSD EKQ---TVKSHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQS
. : :..:. :.: . ... .: .:::.:.::::.::::: .:::::::
CCDS56 QTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQS
190 200 210 220 230 240
390 400 410 420 430 440
pF1KSD KRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRANEEH-WPKGDIHEDFC
::::::::.::::.::: ..: :::. : .:::. . ::::. : . :.. :
CCDS56 KRQERKRRSTANPAYSG-LLETERKRLASNYLNNPLF--LTARANEDPCWKNEITHDEHC
250 260 270 280 290 300
450 460 470 480 490 500
pF1KSD SVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAI
..:.....: : :: .:::.::.::::: :::.:.:::::.. :::.:..:: : :::
CCDS56 AACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAI
310 320 330 340 350 360
510 520 530 540 550 560
pF1KSD VHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTILARQKEM
::::...:..:::::::::. .:.:..:..:::.. ..:.....::.:.:...::::.
CCDS56 VHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGT
370 380 390 400 410 420
570 580 590 600 610 620
pF1KSD HSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPAPSPSSQSCTA
.:::.... :.:::.: .: . . . .. . . :: : :. ::: . :....
CCDS56 QSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPW-TKPSVAATHPTVQHPQGHN
430 440 450 460 470
630
pF1KSD NCNQGEETK
>>CCDS46727.1 PHF21B gene_id:112885|Hs108|chr22 (489 aa)
initn: 978 init1: 552 opt: 995 Z-score: 589.4 bits: 118.9 E(32554): 1.6e-26
Smith-Waterman score: 1010; 38.9% identity (68.9% similar) in 447 aa overlap (213-622:49-489)
190 200 210 220 230 240
pF1KSD SSKVTGPGAEAVQIVAKNTVTLQVQATPPQPIKVPQFIPPPRLTPR-PNFLPQVRPKPVA
:. :: ::. . ::::::: .
CCDS46 NGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLI
20 30 40 50 60 70
250 260 270 280 290
pF1KSD QNNIPIAPAP--PPMLAAPQLIQRPVMLTKFTPT-TLPTSQNSIHPVRVVNGQTATIAKT
...:.::. :: : .:. .... .:. .:::..:.. : . ..: ..:.
CCDS46 PDSLPVAPGRDRPP--KQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQALAEP
80 90 100 110 120 130
300 310 320
pF1KSD FPMAQ-LTS------IVIATPGTRLA-GPQT----------VQ-----------LSKPSL
.:. :.: :. ..:.. : .:.: :: . .:..
CCDS46 AALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKVIIIQPQV
140 150 160 170 180 190
330 340 350 360 370 380
pF1KSD EKQ---TVKSHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQS
. : :..:. :.: . ... .: .:::.:.::::.::::: .:::::::
CCDS46 QTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQS
200 210 220 230 240 250
390 400 410 420 430 440
pF1KSD KRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRANEEH-WPKGDIHEDFC
::::::::.::::.::: ..: :::. : .:::. . ::::. : . :.. :
CCDS46 KRQERKRRSTANPAYSG-LLETERKRLASNYLNNPLF--LTARANEDPCWKNEITHDEHC
260 270 280 290 300 310
450 460 470 480 490 500
pF1KSD SVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAI
..:.....: : :: .:::.::.::::: :::.:.:::::.. :::.:..:: : :::
CCDS46 AACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAI
320 330 340 350 360 370
510 520 530 540 550 560
pF1KSD VHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTILARQKEM
::::...:..:::::::::. .:.:..:..:::.. ..:.....::.:.:...::::.
CCDS46 VHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGT
380 390 400 410 420 430
570 580 590 600 610 620
pF1KSD HSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPAPSPSSQSCTA
.:::.... :.:::.: .: . . . .. . . :: : :. ::: . :....
CCDS46 QSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPW-TKPSVAATHPTVQHPQGHN
440 450 460 470 480
630
pF1KSD NCNQGEETK
>>CCDS14061.1 PHF21B gene_id:112885|Hs108|chr22 (531 aa)
initn: 978 init1: 552 opt: 957 Z-score: 567.2 bits: 114.9 E(32554): 2.9e-25
Smith-Waterman score: 1028; 34.5% identity (61.7% similar) in 624 aa overlap (1-622:1-531)
10 20 30 40 50 60
pF1KSD MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK
::::. ::: ::. :: :.:::::::: : .:.:::.:: .
CCDS14 MELQSRPEALAVELARHQ-----------NGDLKKQLHERQPRIAALSDKQALGT-----
10 20 30 40
70 80 90 100 110 120
pF1KSD NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ
: .: . : . ::.: : :.::. :..
CCDS14 -------------ITAVP-----VTGPQVSSLQRL----------AGQGAAVLPQVRP--
50 60 70
130 140 150 160 170
pF1KSD KTVTTASMITTKTLPLVLKAATATMPASVVG-QRPTIAMVTAINSQKAVLSTDVQNTPVN
::. :. .. : . . :.::. . :. :. :: :. :...:.
CCDS14 KTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNT--------VSHVPAP
80 90 100 110 120
180 190 200 210 220 230
pF1KSD LQTSSKVTGPGAEAVQIVAKNTVTLQVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKP
. . .. :.: : . .. :. . .: :. .. . : .. . . .:.:
CCDS14 GSQPQALAEPAALASPL-SSAGVAYAIISTSPS--NAAAMAPSTAVSVVSDSI-KVQPLL
130 140 150 160 170 180
240 250 260 270 280 290
pF1KSD VAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTF
.. .: : :: .:..:. . : :..:: . : : ... .
CCDS14 ISADNKP----PPRLLSSPHPATHHCPLH---PSSLPLTPPS--P---------SLSPS-
190 200 210 220
300 310 320 330 340 350
pF1KSD PMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPK
:. . ...: : .. :... :.: :. . . ... .:. :.: ::.
CCDS14 PLHGIFQVIIIQPQVQTQ-PESTAESRPPTEEPS--QGAQATKKKKEDR---PPT-----
230 240 250 260 270
360 370 380 390 400 410
pF1KSD REENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLN
.:::.:.::::.::::: .:::::::::::::::.::::.::: ..: :::. : .:::
CCDS14 -QENPEKIAFMVALGLVTTEHLEEIQSKRQERKRRSTANPAYSG-LLETERKRLASNYLN
280 290 300 310 320 330
420 430 440 450 460 470
pF1KSD STMHPGTRKRANEEH-WPKGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPK
. . ::::. : . :.. :..:.....: : :: .:::.::.::::: ::
CCDS14 NPLF--LTARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPK
340 350 360 370 380
480 490 500 510 520 530
pF1KSD GMWICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLE
:.:.:::::.. :::.:..:: : :::::::...:..:::::::::. .:.:..:..:::
CCDS14 GVWVCPRCQQKALKKDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLE
390 400 410 420 430 440
540 550 560 570 580 590
pF1KSD QKVKQLSNSISKCMEMKNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAIS
.. ..:.....::.:.:...::::. .:::.... :.:::.: .: . . . .. . .
CCDS14 ERDRRLASAVQKCLELKTSLLARQRGTQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLL
450 460 470 480 490 500
600 610 620 630
pF1KSD NGPDCTPPANAATSTPAPSPSSQSCTANCNQGEETK
:: : :. ::: . :....
CCDS14 AGPW-TKPSVAATHPTVQHPQGHN
510 520 530
>>CCDS63504.1 PHF21B gene_id:112885|Hs108|chr22 (327 aa)
initn: 816 init1: 552 opt: 925 Z-score: 551.9 bits: 111.4 E(32554): 2e-24
Smith-Waterman score: 925; 42.6% identity (74.9% similar) in 331 aa overlap (301-622:1-327)
280 290 300 310 320
pF1KSD TPTTLPTSQNSIHPVRVVNGQTATIAKTFPMAQLTSIVIATPGTR-----LAGPQTVQLS
:: :.. ... . . ... . : .
CCDS63 MAPSTAVSVVSDSIKVQPLLISADNKVIII
10 20 30
330 340 350 360 370 380
pF1KSD KPSLEKQ---TVKSHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLE
.:... : :..:. :.: . ... .: .:::.:.::::.::::: .:::
CCDS63 QPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLE
40 50 60 70 80 90
390 400 410 420 430 440
pF1KSD EIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRANEEH-WPKGDIH
::::::::::::.::::.::: ..: :::. : .:::. . ::::. : . :
CCDS63 EIQSKRQERKRRSTANPAYSG-LLETERKRLASNYLNNPLF--LTARANEDPCWKNEITH
100 110 120 130 140
450 460 470 480 490 500
pF1KSD EDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPG
.. :..:.....: : :: .:::.::.::::: :::.:.:::::.. :::.:..:: :
CCDS63 DEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTG
150 160 170 180 190 200
510 520 530 540 550 560
pF1KSD TLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTILAR
:::::::...:..:::::::::. .:.:..:..:::.. ..:.....::.:.:...:::
CCDS63 MLAIVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLAR
210 220 230 240 250 260
570 580 590 600 610 620
pF1KSD QKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPAPSPSSQ
:. .:::.... :.:::.: .: . . . .. . . :: : :. ::: . :...
CCDS63 QRGTQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPW-TKPSVAATHPTVQHPQGH
270 280 290 300 310 320
630
pF1KSD SCTANCNQGEETK
.
CCDS63 N
634 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 06:56:55 2016 done: Thu Nov 3 06:56:56 2016
Total Scan time: 4.060 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]