FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA1627, 456 aa
  1>>>pF1KSDA1627 456 - 456 aa - 456 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.8747+/-0.000844; mu= 12.5947+/- 0.051
 mean_var=149.5983+/-29.704, 0's: 0 Z-trim(112.0): 29  B-trim: 0 in 0/53
 Lambda= 0.104860
 statistics sampled from 12796 (12815) to 12796 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.735), E-opt: 0.2 (0.394), width:  16
 Scan time:  2.980

The best scores are:                                      opt bits E(32554)
CCDS34053.1 METTL14 gene_id:57721|Hs108|chr4       ( 456) 3135 485.8 3.8e-137


>>CCDS34053.1 METTL14 gene_id:57721|Hs108|chr4            (456 aa)
 initn: 3135 init1: 3135 opt: 3135  Z-score: 2575.7  bits: 485.8 E(32554): 3.8e-137
Smith-Waterman score: 3135; 100.0% identity (100.0% similar) in 456 aa overlap (1-456:1-456)

               10        20        30        40        50        60
pF1KSD MDSRLQEIRERQKLRRQLLAQQLGAESADSIGAVLNSKDEQREIAETRETCRASYDTSAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MDSRLQEIRERQKLRRQLLAQQLGAESADSIGAVLNSKDEQREIAETRETCRASYDTSAP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD NAKRKYLDEGETDEDKMEEYKDELEMQQDEENLPYEEEIYKDSSTFLKGTQSLNPHNDYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 NAKRKYLDEGETDEDKMEEYKDELEMQQDEENLPYEEEIYKDSSTFLKGTQSLNPHNDYC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD QHFVDTGHRPQNFIRDVGLADRFEEYPKLRELIRLKDELIAKSNTPPMYLQADIEAFDIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QHFVDTGHRPQNFIRDVGLADRFEEYPKLRELIRLKDELIAKSNTPPMYLQADIEAFDIR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD ELTPKFDVILLEPPLEEYYRETGITANEKCWTWDDIMKLEIDEIAAPRSFIFLWCGSGEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ELTPKFDVILLEPPLEEYYRETGITANEKCWTWDDIMKLEIDEIAAPRSFIFLWCGSGEG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD LDLGRVCLRKWGYRRCEDICWIKTNKNNPGKTKTLDPKAVFQRTKEHCLMGIKGTVKRST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LDLGRVCLRKWGYRRCEDICWIKTNKNNPGKTKTLDPKAVFQRTKEHCLMGIKGTVKRST
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD DGDFIHANVDIDLIITEEPEIGNIEKPVEIFHIIEHFCLGRRRLHLFGRDSTIRPGWLTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 DGDFIHANVDIDLIITEEPEIGNIEKPVEIFHIIEHFCLGRRRLHLFGRDSTIRPGWLTV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD GPTLTNSNYNAETYASYFSAPNSYLTGCTEEIERLRPKSPPPKSKSDRGGGAPRGGGRGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GPTLTNSNYNAETYASYFSAPNSYLTGCTEEIERLRPKSPPPKSKSDRGGGAPRGGGRGG
              370       380       390       400       410       420

              430       440       450      
pF1KSD TSAGRGRERNRSNFRGERGGFRGGRGGAHRGGFPPR
       ::::::::::::::::::::::::::::::::::::
CCDS34 TSAGRGRERNRSNFRGERGGFRGGRGGAHRGGFPPR
              430       440       450      




456 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 06:51:40 2016 done: Thu Nov  3 06:51:41 2016
 Total Scan time:  2.980 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]