FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA1623, 1232 aa
  1>>>pF1KSDA1623 1232 - 1232 aa - 1232 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.2572+/-0.00106; mu= 0.6091+/- 0.065
 mean_var=492.8658+/-99.380, 0's: 0 Z-trim(117.3): 31  B-trim: 0 in 0/54
 Lambda= 0.057771
 statistics sampled from 18014 (18039) to 18014 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.805), E-opt: 0.2 (0.554), width:  16
 Scan time:  6.590

The best scores are:                                      opt bits E(32554)
CCDS32949.1 ANO8 gene_id:57719|Hs108|chr19         (1232) 8462 720.8 5.3e-207


>>CCDS32949.1 ANO8 gene_id:57719|Hs108|chr19              (1232 aa)
 initn: 8462 init1: 8462 opt: 8462  Z-score: 3829.9  bits: 720.8 E(32554): 5.3e-207
Smith-Waterman score: 8462; 100.0% identity (100.0% similar) in 1232 aa overlap (1-1232:1-1232)

               10        20        30        40        50        60
pF1KSD MAEAASGAGGTSLEGERGKRPPPEGEPAAPASGVLDKLFGKRLLQAGRYLVSHKAWMKTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MAEAASGAGGTSLEGERGKRPPPEGEPAAPASGVLDKLFGKRLLQAGRYLVSHKAWMKTV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD PTENCDVLMTFPDTTDDHTLLWLLNHIRVGIPELIVQVRHHRHTRAYAFFVTATYESLLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PTENCDVLMTFPDTTDDHTLLWLLNHIRVGIPELIVQVRHHRHTRAYAFFVTATYESLLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD GADELGLRKAVKAEFGGGTRGFSCEEDFIYENVESELRFFTSQERQSIIRFWLQNLRAKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GADELGLRKAVKAEFGGGTRGFSCEEDFIYENVESELRFFTSQERQSIIRFWLQNLRAKQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD GEALHNVRFLEDQPIIPELAARGIIQQVFPVHEQRILNRLMKSWVQAVCENQPLDDICDY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GEALHNVRFLEDQPIIPELAARGIIQQVFPVHEQRILNRLMKSWVQAVCENQPLDDICDY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD FGVKIAMYFAWLGFYTSAMVYPAVFGSVLYTFTEADQTSRDVSCVVFALFNVIWSTLFLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 FGVKIAMYFAWLGFYTSAMVYPAVFGSVLYTFTEADQTSRDVSCVVFALFNVIWSTLFLE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD EWKRRGAELAYKWGTLDSPGEAVEEPRPQFRGVRRISPITRAEEFYYPPWKRLLFQLLVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EWKRRGAELAYKWGTLDSPGEAVEEPRPQFRGVRRISPITRAEEFYYPPWKRLLFQLLVS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD LPLCLACLVCVFLLMLGCFQLQELVLSVKGLPRLARFLPKVMLALLVSVSAEGYKKLAIW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LPLCLACLVCVFLLMLGCFQLQELVLSVKGLPRLARFLPKVMLALLVSVSAEGYKKLAIW
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD LNDMENYRLESAYEKHLIIKVVLFQFVNSYLSLFYIGFYLKDMERLKEMLATLLITRQFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LNDMENYRLESAYEKHLIIKVVLFQFVNSYLSLFYIGFYLKDMERLKEMLATLLITRQFL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD QNVREVLQPHLYRRLGRGELGLRAVWELARALLGLLSLRRPAPRRLEPQADEGGGGGSGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 QNVREVLQPHLYRRLGRGELGLRAVWELARALLGLLSLRRPAPRRLEPQADEGGGGGSGG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KSD GGRRCLSGGCGAPEEEEEAALVERRRAGEGGEEGDGPPGGKEEDEDDEEEEDEEEEEDEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GGRRCLSGGCGAPEEEEEAALVERRRAGEGGEEGDGPPGGKEEDEDDEEEEDEEEEEDEE
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KSD EGEEGGLLDCGLRLKKVSFAERGAGRRRPGPSPEALLEEGSPTMVEKGLEPGVFTLAEED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EGEEGGLLDCGLRLKKVSFAERGAGRRRPGPSPEALLEEGSPTMVEKGLEPGVFTLAEED
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KSD DEAEGAPGSPEREPPAILFRRAGGEGRDQGPDGGPDPEPGSNSDSTRRQRRQNRSSWIDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 DEAEGAPGSPEREPPAILFRRAGGEGRDQGPDGGPDPEPGSNSDSTRRQRRQNRSSWIDP
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KSD PEEEHSPQLTQAELESCMKKYEDTFQDYQEMFVQFGYVVLFSSAFPLAALCALVNNLIEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PEEEHSPQLTQAELESCMKKYEDTFQDYQEMFVQFGYVVLFSSAFPLAALCALVNNLIEI
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KSD RSDAFKLCTGLQRPFGQRVESIGQWQKVMEAMGVLAIVVNCYLIGQCGQLQRLFPWLSPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RSDAFKLCTGLQRPFGQRVESIGQWQKVMEAMGVLAIVVNCYLIGQCGQLQRLFPWLSPE
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KSD AAIVSVVVLEHFALLLKYLIHVAIPDIPGWVAEEMAKLEYQRREAFKRHERQAQHRYQQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AAIVSVVVLEHFALLLKYLIHVAIPDIPGWVAEEMAKLEYQRREAFKRHERQAQHRYQQQ
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KSD QRRRREEEERQRHAEHHARREHDSGGREEARAEGSGLDPATSSEKASAKAKGSTAGGHGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 QRRRREEEERQRHAEHHARREHDSGGREEARAEGSGLDPATSSEKASAKAKGSTAGGHGP
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KSD ERPKRPGSLLAPNNVMKLKQIIPLQGKFLSSGATSSLAAAGAGATTRPPPAQSPTGSDTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ERPKRPGSLLAPNNVMKLKQIIPLQGKFLSSGATSSLAAAGAGATTRPPPAQSPTGSDTR
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KSD LPAFLSFKFLKSPETRRDSERSHSPPKAFHAGKLFPFGGTRAEPGSNGAGGQARPDGTPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LPAFLSFKFLKSPETRRDSERSHSPPKAFHAGKLFPFGGTRAEPGSNGAGGQARPDGTPS
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KSD SGSSRVQRSGPVDEALAEELEAPRPEEEGSGTALAPVGAPALRTRRSRSPAPPPPMPLPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SGSSRVQRSGPVDEALAEELEAPRPEEEGSGTALAPVGAPALRTRRSRSPAPPPPMPLPR
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KSD PPTPPAGCWQWDGPWGCGGEGAAPRQALAAAECPPCAMAGPPPAPQPLPGDASFYSLPPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PPTPPAGCWQWDGPWGCGGEGAAPRQALAAAECPPCAMAGPPPAPQPLPGDASFYSLPPP
             1150      1160      1170      1180      1190      1200

             1210      1220      1230  
pF1KSD PLPPTSDPLETPAPSPSPSPSPQAVCWPSGWH
       ::::::::::::::::::::::::::::::::
CCDS32 PLPPTSDPLETPAPSPSPSPSPQAVCWPSGWH
             1210      1220      1230  




1232 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 19:06:48 2016 done: Thu Nov  3 19:06:49 2016
 Total Scan time:  6.590 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]