Result of FASTA (ccds) for
pF1KSDA1589
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1589, 777 aa
1>>>pF1KSDA1589 777 - 777 aa - 777 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5442+/-0.00103; mu= 10.1047+/- 0.061
mean_var=135.4673+/-28.709, 0's: 0 Z-trim(107.9): 65 B-trim: 0 in 0/52
Lambda= 0.110194
statistics sampled from 9797 (9857) to 9797 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.303), width: 16
Scan time: 2.560
The best scores are: opt bits E(32554)
CCDS9811.1 ZFYVE1 gene_id:53349|Hs108|chr14 ( 777) 5437 876.5 0
CCDS61498.1 ZFYVE1 gene_id:53349|Hs108|chr14 ( 763) 3467 563.3 5.1e-160
CCDS41969.1 ZFYVE1 gene_id:53349|Hs108|chr14 ( 362) 2631 430.3 2.8e-120
>>CCDS9811.1 ZFYVE1 gene_id:53349|Hs108|chr14 (777 aa)
initn: 5437 init1: 5437 opt: 5437 Z-score: 4678.8 bits: 876.5 E(32554): 0
Smith-Waterman score: 5437; 100.0% identity (100.0% similar) in 777 aa overlap (1-777:1-777)
10 20 30 40 50 60
pF1KSD MSAQTSPAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 MSAQTSPAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD IRLKPGHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKINLCLECQKRTHSGGNKRRHPVTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 IRLKPGHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKINLCLECQKRTHSGGNKRRHPVTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD YNVSNLQESLEAEEMDEETKRKKMTEKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 YNVSNLQESLEAEEMDEETKRKKMTEKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD KVVSIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCTVGVWAAYDPVHKVAVIDTEGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 KVVSIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCTVGVWAAYDPVHKVAVIDTEGLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 GATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD RCGLDVPLSTLGPAVIIFHETVHTQLLGSDHPSEVPEKLIQDRFRKLGRFPEAFSSIHYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 RCGLDVPLSTLGPAVIIFHETVHTQLLGSDHPSEVPEKLIQDRFRKLGRFPEAFSSIHYK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD GTRTYNPPTDFSGLRRALEQLLENNTTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 GTRTYNPPTDFSGLRRALEQLLENNTTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FFPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 FFPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD EVSVVPKTSASTDSPWMGLAKYAWSGYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 EVSVVPKTSASTDSPWMGLAKYAWSGYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD HVWPGTDGFLKDNNNAAQRLLDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 HVWPGTDGFLKDNNNAAQRLLDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD ILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 ILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD QLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 QLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILH
670 680 690 700 710 720
730 740 750 760 770
pF1KSD CHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 CHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
730 740 750 760 770
>>CCDS61498.1 ZFYVE1 gene_id:53349|Hs108|chr14 (763 aa)
initn: 3755 init1: 3467 opt: 3467 Z-score: 2986.4 bits: 563.3 E(32554): 5.1e-160
Smith-Waterman score: 5294; 98.2% identity (98.2% similar) in 777 aa overlap (1-777:1-763)
10 20 30 40 50 60
pF1KSD MSAQTSPAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 MSAQTSPAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD IRLKPGHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKINLCLECQKRTHSGGNKRRHPVTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 IRLKPGHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKINLCLECQKRTHSGGNKRRHPVTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD YNVSNLQESLEAEEMDEETKRKKMTEKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 YNVSNLQESLEAEEMDEETKRKKMTEKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD KVVSIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCTVGVWAAYDPVHKVAVIDTEGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 KVVSIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCTVGVWAAYDPVHKVAVIDTEGLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 GATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD RCGLDVPLSTLGPAVIIFHETVHTQLLGSDHPSEVPEKLIQDRFRKLGRFPEAFSSIHYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 RCGLDVPLSTLGPAVIIFHETVHTQLLGSDHPSEVPEKLIQDRFRKLGRFPEAFSSIHYK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD GTRTYNPPTDFSGLRRALEQLLENNTTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 GTRTYNPPTDFSGLRRALEQLLENNTTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FFPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 FFPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD EVSVVPKTSASTDSPWMGLAKYAWSGYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIV
:::::::::::::::::::::::::: ::::::::::::::::::::
CCDS61 EVSVVPKTSASTDSPWMGLAKYAWSG--------------RQYWFGNQDPVDTVVRTEIV
490 500 510 520
550 560 570 580 590 600
pF1KSD HVWPGTDGFLKDNNNAAQRLLDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 HVWPGTDGFLKDNNNAAQRLLDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQ
530 540 550 560 570 580
610 620 630 640 650 660
pF1KSD ILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 ILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNV
590 600 610 620 630 640
670 680 690 700 710 720
pF1KSD QLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 QLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILH
650 660 670 680 690 700
730 740 750 760 770
pF1KSD CHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 CHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
710 720 730 740 750 760
>>CCDS41969.1 ZFYVE1 gene_id:53349|Hs108|chr14 (362 aa)
initn: 2631 init1: 2631 opt: 2631 Z-score: 2272.9 bits: 430.3 E(32554): 2.8e-120
Smith-Waterman score: 2631; 100.0% identity (100.0% similar) in 362 aa overlap (416-777:1-362)
390 400 410 420 430 440
pF1KSD TTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSSFFPDEYFTCSSLCLSCGVGCKKSMN
::::::::::::::::::::::::::::::
CCDS41 MAHSSFFPDEYFTCSSLCLSCGVGCKKSMN
10 20 30
450 460 470 480 490 500
pF1KSD HGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGEEVSVVPKTSASTDSPWMGLAKYAWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 HGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGEEVSVVPKTSASTDSPWMGLAKYAWS
40 50 60 70 80 90
510 520 530 540 550 560
pF1KSD GYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDGFLKDNNNAAQRLLDGMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDGFLKDNNNAAQRLLDGMN
100 110 120 130 140 150
570 580 590 600 610 620
pF1KSD FMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNKCATSFKDNDTKHHCRACGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 FMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNKCATSFKDNDTKHHCRACGE
160 170 180 190 200 210
630 640 650 660 670 680
pF1KSD GFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNVQLAVTEAQVDDEGGTLIARKVGEAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNVQLAVTEAQVDDEGGTLIARKVGEAV
220 230 240 250 260 270
690 700 710 720 730 740
pF1KSD QNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 QNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFC
280 290 300 310 320 330
750 760 770
pF1KSD DECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
::::::::::::::::::::::::::::::::
CCDS41 DECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
340 350 360
777 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 06:45:49 2016 done: Thu Nov 3 06:45:50 2016
Total Scan time: 2.560 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]