Result of FASTA (omim) for
pF1KSDA1580
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1580, 640 aa
1>>>pF1KSDA1580 640 - 640 aa - 640 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2371+/-0.000763; mu= -1.3589+/- 0.047
mean_var=304.4858+/-62.559, 0's: 0 Z-trim(110.6): 462 B-trim: 751 in 2/55
Lambda= 0.073501
statistics sampled from 18474 (19044) to 18474 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.561), E-opt: 0.2 (0.223), width: 16
Scan time: 10.190
The best scores are: opt bits E(85289)
XP_011518544 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_011518546 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
NP_001245348 (OMIM: 608817) leucine-rich repeat-co ( 640) 4243 465.4 2.8e-130
XP_016873564 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_016873563 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_016873566 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
NP_065980 (OMIM: 608817) leucine-rich repeat-conta ( 640) 4243 465.4 2.8e-130
XP_016873568 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_011518545 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_016873559 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_011518542 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_016873565 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_016873561 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_016873562 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_016873567 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_016873560 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_011518541 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_011518540 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_011518543 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 4243 465.4 2.8e-130
XP_016867994 (OMIM: 610486) PREDICTED: leucine-ric ( 653) 2295 258.8 4.3e-68
XP_011514763 (OMIM: 610486) PREDICTED: leucine-ric ( 653) 2295 258.8 4.3e-68
NP_071426 (OMIM: 610486) leucine-rich repeat-conta ( 653) 2295 258.8 4.3e-68
XP_005271426 (OMIM: 608869,615112) PREDICTED: leuc ( 958) 628 82.2 9.2e-15
NP_001288116 (OMIM: 609791) leucine-rich repeat an ( 614) 529 71.5 9.8e-12
NP_001288124 (OMIM: 609791) leucine-rich repeat an ( 614) 529 71.5 9.8e-12
NP_001288127 (OMIM: 609791) leucine-rich repeat an ( 614) 529 71.5 9.8e-12
XP_016878171 (OMIM: 609791) PREDICTED: leucine-ric ( 614) 529 71.5 9.8e-12
NP_001288128 (OMIM: 609791) leucine-rich repeat an ( 614) 529 71.5 9.8e-12
NP_001288118 (OMIM: 609791) leucine-rich repeat an ( 614) 529 71.5 9.8e-12
NP_001288121 (OMIM: 609791) leucine-rich repeat an ( 614) 529 71.5 9.8e-12
NP_001288126 (OMIM: 609791) leucine-rich repeat an ( 614) 529 71.5 9.8e-12
XP_011520420 (OMIM: 609791) PREDICTED: leucine-ric ( 614) 529 71.5 9.8e-12
NP_001288115 (OMIM: 609791) leucine-rich repeat an ( 614) 529 71.5 9.8e-12
NP_001288120 (OMIM: 609791) leucine-rich repeat an ( 614) 529 71.5 9.8e-12
NP_001288129 (OMIM: 609791) leucine-rich repeat an ( 614) 529 71.5 9.8e-12
NP_001288123 (OMIM: 609791) leucine-rich repeat an ( 614) 529 71.5 9.8e-12
NP_116197 (OMIM: 609791) leucine-rich repeat and i ( 620) 529 71.5 9.9e-12
NP_001299615 (OMIM: 608869,615112) leucine-rich re ( 962) 476 66.1 6.6e-10
NP_055628 (OMIM: 608869,615112) leucine-rich repea (1065) 476 66.2 7e-10
NP_689783 (OMIM: 609793) leucine-rich repeat and i ( 606) 460 64.2 1.6e-09
XP_016869792 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 460 64.2 1.6e-09
XP_016869795 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 460 64.2 1.6e-09
XP_016869796 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 460 64.2 1.6e-09
XP_011516030 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 460 64.2 1.6e-09
XP_011516026 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 460 64.2 1.6e-09
XP_011516021 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 460 64.2 1.6e-09
XP_016869793 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 460 64.2 1.6e-09
NP_001245211 (OMIM: 609793) leucine-rich repeat an ( 606) 460 64.2 1.6e-09
XP_016869794 (OMIM: 609793) PREDICTED: leucine-ric ( 606) 460 64.2 1.6e-09
NP_001258 (OMIM: 602178) chondroadherin precursor ( 359) 454 63.3 1.7e-09
>>XP_011518544 (OMIM: 608817) PREDICTED: leucine-rich re (640 aa)
initn: 4243 init1: 4243 opt: 4243 Z-score: 2459.8 bits: 465.4 E(85289): 2.8e-130
Smith-Waterman score: 4243; 100.0% identity (100.0% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KSD MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
550 560 570 580 590 600
610 620 630 640
pF1KSD YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
::::::::::::::::::::::::::::::::::::::::
XP_011 YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
610 620 630 640
>>XP_011518546 (OMIM: 608817) PREDICTED: leucine-rich re (640 aa)
initn: 4243 init1: 4243 opt: 4243 Z-score: 2459.8 bits: 465.4 E(85289): 2.8e-130
Smith-Waterman score: 4243; 100.0% identity (100.0% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KSD MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
550 560 570 580 590 600
610 620 630 640
pF1KSD YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
::::::::::::::::::::::::::::::::::::::::
XP_011 YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
610 620 630 640
>>NP_001245348 (OMIM: 608817) leucine-rich repeat-contai (640 aa)
initn: 4243 init1: 4243 opt: 4243 Z-score: 2459.8 bits: 465.4 E(85289): 2.8e-130
Smith-Waterman score: 4243; 100.0% identity (100.0% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KSD MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
550 560 570 580 590 600
610 620 630 640
pF1KSD YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
::::::::::::::::::::::::::::::::::::::::
NP_001 YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
610 620 630 640
>>XP_016873564 (OMIM: 608817) PREDICTED: leucine-rich re (640 aa)
initn: 4243 init1: 4243 opt: 4243 Z-score: 2459.8 bits: 465.4 E(85289): 2.8e-130
Smith-Waterman score: 4243; 100.0% identity (100.0% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KSD MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
550 560 570 580 590 600
610 620 630 640
pF1KSD YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
::::::::::::::::::::::::::::::::::::::::
XP_016 YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
610 620 630 640
>>XP_016873563 (OMIM: 608817) PREDICTED: leucine-rich re (640 aa)
initn: 4243 init1: 4243 opt: 4243 Z-score: 2459.8 bits: 465.4 E(85289): 2.8e-130
Smith-Waterman score: 4243; 100.0% identity (100.0% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KSD MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
550 560 570 580 590 600
610 620 630 640
pF1KSD YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
::::::::::::::::::::::::::::::::::::::::
XP_016 YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
610 620 630 640
>>XP_016873566 (OMIM: 608817) PREDICTED: leucine-rich re (640 aa)
initn: 4243 init1: 4243 opt: 4243 Z-score: 2459.8 bits: 465.4 E(85289): 2.8e-130
Smith-Waterman score: 4243; 100.0% identity (100.0% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KSD MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
550 560 570 580 590 600
610 620 630 640
pF1KSD YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
::::::::::::::::::::::::::::::::::::::::
XP_016 YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
610 620 630 640
>>NP_065980 (OMIM: 608817) leucine-rich repeat-containin (640 aa)
initn: 4243 init1: 4243 opt: 4243 Z-score: 2459.8 bits: 465.4 E(85289): 2.8e-130
Smith-Waterman score: 4243; 100.0% identity (100.0% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KSD MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
550 560 570 580 590 600
610 620 630 640
pF1KSD YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
::::::::::::::::::::::::::::::::::::::::
NP_065 YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
610 620 630 640
>>XP_016873568 (OMIM: 608817) PREDICTED: leucine-rich re (640 aa)
initn: 4243 init1: 4243 opt: 4243 Z-score: 2459.8 bits: 465.4 E(85289): 2.8e-130
Smith-Waterman score: 4243; 100.0% identity (100.0% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KSD MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
550 560 570 580 590 600
610 620 630 640
pF1KSD YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
::::::::::::::::::::::::::::::::::::::::
XP_016 YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
610 620 630 640
>>XP_011518545 (OMIM: 608817) PREDICTED: leucine-rich re (640 aa)
initn: 4243 init1: 4243 opt: 4243 Z-score: 2459.8 bits: 465.4 E(85289): 2.8e-130
Smith-Waterman score: 4243; 100.0% identity (100.0% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KSD MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
550 560 570 580 590 600
610 620 630 640
pF1KSD YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
::::::::::::::::::::::::::::::::::::::::
XP_011 YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
610 620 630 640
>>XP_016873559 (OMIM: 608817) PREDICTED: leucine-rich re (640 aa)
initn: 4243 init1: 4243 opt: 4243 Z-score: 2459.8 bits: 465.4 E(85289): 2.8e-130
Smith-Waterman score: 4243; 100.0% identity (100.0% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KSD MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
550 560 570 580 590 600
610 620 630 640
pF1KSD YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
::::::::::::::::::::::::::::::::::::::::
XP_016 YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
610 620 630 640
640 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 06:42:10 2016 done: Thu Nov 3 06:42:11 2016
Total Scan time: 10.190 Total Display time: 0.200
Function used was FASTA [36.3.4 Apr, 2011]