Result of FASTA (omim) for
pF1KSDA1576
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1576, 419 aa
1>>>pF1KSDA1576 419 - 419 aa - 419 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8613+/-0.000344; mu= 20.5538+/- 0.022
mean_var=69.0079+/-13.844, 0's: 0 Z-trim(114.9): 60 B-trim: 109 in 1/49
Lambda= 0.154392
statistics sampled from 24952 (25013) to 24952 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.664), E-opt: 0.2 (0.293), width: 16
Scan time: 9.150
The best scores are: opt bits E(85289)
NP_006364 (OMIM: 604631) synaptic vesicle membrane ( 393) 1070 247.2 5.3e-65
XP_011539049 (OMIM: 123691) PREDICTED: quinone oxi ( 329) 487 117.3 5.8e-26
NP_001880 (OMIM: 123691) quinone oxidoreductase is ( 329) 487 117.3 5.8e-26
NP_001123514 (OMIM: 123691) quinone oxidoreductase ( 329) 487 117.3 5.8e-26
NP_001123515 (OMIM: 123691) quinone oxidoreductase ( 295) 423 103.0 1e-21
XP_016855856 (OMIM: 123691) PREDICTED: quinone oxi ( 295) 423 103.0 1e-21
NP_004872 (OMIM: 605171) quinone oxidoreductase PI ( 332) 413 100.8 5.3e-21
NP_671713 (OMIM: 605171) quinone oxidoreductase PI ( 332) 413 100.8 5.3e-21
XP_006712213 (OMIM: 605171) PREDICTED: quinone oxi ( 248) 352 87.1 5.3e-17
NP_001193731 (OMIM: 605171) quinone oxidoreductase ( 248) 352 87.1 5.3e-17
NP_057095 (OMIM: 608205) trans-2-enoyl-CoA reducta ( 373) 269 68.8 2.6e-11
XP_011539843 (OMIM: 608205) PREDICTED: trans-2-eno ( 364) 250 64.5 4.8e-10
XP_005245942 (OMIM: 608205) PREDICTED: trans-2-eno ( 401) 250 64.6 5.2e-10
XP_011539842 (OMIM: 608205) PREDICTED: trans-2-eno ( 431) 245 63.5 1.2e-09
NP_004095 (OMIM: 600212) fatty acid synthase [Homo (2511) 251 65.5 1.8e-09
XP_011521840 (OMIM: 600212) PREDICTED: fatty acid (2511) 251 65.5 1.8e-09
XP_016856905 (OMIM: 608205) PREDICTED: trans-2-eno ( 260) 239 62.0 2.1e-09
XP_016856904 (OMIM: 608205) PREDICTED: trans-2-eno ( 297) 239 62.0 2.3e-09
NP_001019903 (OMIM: 608205) trans-2-enoyl-CoA redu ( 297) 239 62.0 2.3e-09
XP_016856902 (OMIM: 608205) PREDICTED: trans-2-eno ( 297) 239 62.0 2.3e-09
XP_016856903 (OMIM: 608205) PREDICTED: trans-2-eno ( 297) 239 62.0 2.3e-09
XP_005245944 (OMIM: 608205) PREDICTED: trans-2-eno ( 297) 239 62.0 2.3e-09
XP_011539841 (OMIM: 608205) PREDICTED: trans-2-eno ( 459) 226 59.3 2.3e-08
XP_011539847 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 215 56.7 1.1e-07
XP_011539851 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 215 56.7 1.1e-07
XP_011539849 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 215 56.7 1.1e-07
XP_011539848 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 215 56.7 1.1e-07
XP_016856901 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 215 56.7 1.1e-07
XP_011539852 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 215 56.7 1.1e-07
XP_011539855 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 215 56.7 1.1e-07
XP_011539856 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 215 56.7 1.1e-07
XP_016856900 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 215 56.7 1.1e-07
XP_011539845 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 215 56.7 1.1e-07
XP_005270548 (OMIM: 123691) PREDICTED: quinone oxi ( 192) 201 53.4 5.8e-07
NP_001128231 (OMIM: 123691) quinone oxidoreductase ( 192) 201 53.4 5.8e-07
XP_016855857 (OMIM: 123691) PREDICTED: quinone oxi ( 192) 201 53.4 5.8e-07
NP_665857 (OMIM: 603920) quinone oxidoreductase-li ( 349) 191 51.4 4.2e-06
NP_001305675 (OMIM: 610502,616732) reticulon-4-int ( 296) 182 49.3 1.5e-05
XP_011534494 (OMIM: 610502,616732) PREDICTED: reti ( 316) 182 49.3 1.6e-05
NP_116119 (OMIM: 610502,616732) reticulon-4-intera ( 396) 182 49.4 1.9e-05
XP_016866864 (OMIM: 610502,616732) PREDICTED: reti ( 401) 171 47.0 0.0001
NP_003095 (OMIM: 182500) sorbitol dehydrogenase [H ( 357) 148 41.8 0.0033
XP_016866865 (OMIM: 610502,616732) PREDICTED: reti ( 288) 146 41.3 0.0038
NP_000659 (OMIM: 103720,103780) alcohol dehydrogen ( 375) 147 41.6 0.004
NP_000660 (OMIM: 103730,103780,168600) alcohol deh ( 375) 144 40.9 0.0063
>>NP_006364 (OMIM: 604631) synaptic vesicle membrane pro (393 aa)
initn: 1051 init1: 563 opt: 1070 Z-score: 1287.9 bits: 247.2 E(85289): 5.3e-65
Smith-Waterman score: 1070; 44.0% identity (75.1% similar) in 377 aa overlap (19-390:24-393)
10 20 30 40 50
pF1KSD MAKEGVEKAEETEQMIEKEAGKEPAEGGGGDGSHRLGDAQEM-RAVVLAGFGGLN
::...: . ....:. . . . : .::.:::: .
NP_006 MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KSD KLRLFRK--AMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEA
:..: . : : : :.: .:..:::::: :::.::: : : :..::.: .:.: :
NP_006 KVKLQSRPAAPPAPGPGQLTLRLRACGLNFADLMARQGLYDRLPPLPVTPGMEGAGVVIA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KSD LGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVML
.:..:. . :::::.. . : : : .: .. ::. :.: ::::. .:..:::..:
NP_006 VGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KSD FEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDS-VTHLFDR
:. .::. : ::::: :.::::.:..::: :: :::::::::. ::::.:.. ::: .:
NP_006 FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KSD NA-DYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFS
.. :::.:.:.:: .:::::.: : :..:.:: .::::.: . :: .:..:: .....
NP_006 HTTDYVDEIKKISPKGVDIVMDPLGGSDTAKGYNLLKPMGKVVTYGMANLLTGPKRNLMA
250 260 270 280 290 300
300 310 320 330 340 350
pF1KSD FAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPV
.:..::. .:. ..: . :... :: .: . .:.. :. ::: .:..:::: .:::
NP_006 LARTWWNQFSVTALQLLQANRAVCGF---HLGYLDGEVELVSGVVARLLALYNQGHIKPH
310 320 330 340 350
360 370 380 390 400 410
pF1KSD VDSLWALEEVKEAMQRIHDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSE
.::.: .:.: .::...... :.::..: .: : :
NP_006 IDSVWPFEKVADAMKQMQEKKNVGKVLL----VPGPEKEN
360 370 380 390
pF1KSD NKERMPFIQ
>>XP_011539049 (OMIM: 123691) PREDICTED: quinone oxidore (329 aa)
initn: 508 init1: 201 opt: 487 Z-score: 587.1 bits: 117.3 E(85289): 5.8e-26
Smith-Waterman score: 544; 32.3% identity (64.3% similar) in 347 aa overlap (42-378:8-327)
20 30 40 50 60 70
pF1KSD TEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFRK-AMPEPQDGE
:::: . ::: . :.: :.: :.: .
XP_011 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQ
10 20 30
80 90 100 110 120 130
pF1KSD LKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFV
. :.:.:::.: .. ..:.:. . : : .:: . .:..::.::...... ::::..
XP_011 VLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSS
40 50 60 70 80 90
140 150 160 170 180
pF1KSD NYNA-WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSA
. .. .:: . . . :::.:. ..:...::. . . ::: :.. : .. : :::::.:
XP_011 TISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD GGGVGQAVAQLCSTVPNVTVFGTASTFKHEAI--KDSVTHLFD-RNADYVQEVKR-ISAE
.:::: :. :. . . .. ..:::.: . . : .... ..:. :...:....:. .. .
XP_011 SGGVGLAACQI-ARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD GVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIK
:.::... : . : .: ::::. : :. :: . . ..::
XP_011 GIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTI------------------EINPRD
220 230 240 250
310 320 330 340 350 360
pF1KSD LYEENKVIAGFSLLNLL---FKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKE
. ... : : .:.. :.: :.: :. :: .:::. : . ::.: :
XP_011 TMAKESSIIGVTLFSSTKEEFQQYAAALQAGME---IGW-----LKPVIGSQYPLEKVAE
260 270 280 290 300 310
370 380 390 400 410
pF1KSD AMQRI-HDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSENKERMPFIQ
: . : : : ::.::
XP_011 AHENIIHGSGATGKMILLL
320
>>NP_001880 (OMIM: 123691) quinone oxidoreductase isofor (329 aa)
initn: 508 init1: 201 opt: 487 Z-score: 587.1 bits: 117.3 E(85289): 5.8e-26
Smith-Waterman score: 544; 32.3% identity (64.3% similar) in 347 aa overlap (42-378:8-327)
20 30 40 50 60 70
pF1KSD TEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFRK-AMPEPQDGE
:::: . ::: . :.: :.: :.: .
NP_001 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQ
10 20 30
80 90 100 110 120 130
pF1KSD LKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFV
. :.:.:::.: .. ..:.:. . : : .:: . .:..::.::...... ::::..
NP_001 VLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSS
40 50 60 70 80 90
140 150 160 170 180
pF1KSD NYNA-WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSA
. .. .:: . . . :::.:. ..:...::. . . ::: :.. : .. : :::::.:
NP_001 TISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD GGGVGQAVAQLCSTVPNVTVFGTASTFKHEAI--KDSVTHLFD-RNADYVQEVKR-ISAE
.:::: :. :. . . .. ..:::.: . . : .... ..:. :...:....:. .. .
NP_001 SGGVGLAACQI-ARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD GVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIK
:.::... : . : .: ::::. : :. :: . . ..::
NP_001 GIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTI------------------EINPRD
220 230 240 250
310 320 330 340 350 360
pF1KSD LYEENKVIAGFSLLNLL---FKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKE
. ... : : .:.. :.: :.: :. :: .:::. : . ::.: :
NP_001 TMAKESSIIGVTLFSSTKEEFQQYAAALQAGME---IGW-----LKPVIGSQYPLEKVAE
260 270 280 290 300 310
370 380 390 400 410
pF1KSD AMQRI-HDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSENKERMPFIQ
: . : : : ::.::
NP_001 AHENIIHGSGATGKMILLL
320
>>NP_001123514 (OMIM: 123691) quinone oxidoreductase iso (329 aa)
initn: 508 init1: 201 opt: 487 Z-score: 587.1 bits: 117.3 E(85289): 5.8e-26
Smith-Waterman score: 544; 32.3% identity (64.3% similar) in 347 aa overlap (42-378:8-327)
20 30 40 50 60 70
pF1KSD TEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFRK-AMPEPQDGE
:::: . ::: . :.: :.: :.: .
NP_001 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQ
10 20 30
80 90 100 110 120 130
pF1KSD LKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFV
. :.:.:::.: .. ..:.:. . : : .:: . .:..::.::...... ::::..
NP_001 VLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSS
40 50 60 70 80 90
140 150 160 170 180
pF1KSD NYNA-WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSA
. .. .:: . . . :::.:. ..:...::. . . ::: :.. : .. : :::::.:
NP_001 TISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD GGGVGQAVAQLCSTVPNVTVFGTASTFKHEAI--KDSVTHLFD-RNADYVQEVKR-ISAE
.:::: :. :. . . .. ..:::.: . . : .... ..:. :...:....:. .. .
NP_001 SGGVGLAACQI-ARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD GVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIK
:.::... : . : .: ::::. : :. :: . . ..::
NP_001 GIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTI------------------EINPRD
220 230 240 250
310 320 330 340 350 360
pF1KSD LYEENKVIAGFSLLNLL---FKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKE
. ... : : .:.. :.: :.: :. :: .:::. : . ::.: :
NP_001 TMAKESSIIGVTLFSSTKEEFQQYAAALQAGME---IGW-----LKPVIGSQYPLEKVAE
260 270 280 290 300 310
370 380 390 400 410
pF1KSD AMQRI-HDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSENKERMPFIQ
: . : : : ::.::
NP_001 AHENIIHGSGATGKMILLL
320
>>NP_001123515 (OMIM: 123691) quinone oxidoreductase iso (295 aa)
initn: 452 init1: 201 opt: 423 Z-score: 510.7 bits: 103.0 E(85289): 1e-21
Smith-Waterman score: 423; 32.3% identity (72.0% similar) in 232 aa overlap (42-266:8-238)
20 30 40 50 60 70
pF1KSD TEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFRK-AMPEPQDGE
:::: . ::: . :.: :.: :.: .
NP_001 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQ
10 20 30
80 90 100 110 120 130
pF1KSD LKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFV
. :.:.:::.: .. ..:.:. . : : .:: . .:..::.::...... ::::..
NP_001 VLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSS
40 50 60 70 80 90
140 150 160 170 180
pF1KSD NYNA-WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSA
. .. .:: . . . :::.:. ..:...::. . . ::: :.. : .. : :::::.:
NP_001 TISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD GGGVGQAVAQLCSTVPNVTVFGTASTFKHEAI--KDSVTHLFD-RNADYVQEVKRISAEG
.:::: :. :. . . .. ..:::.: . . : .... ..:. :...:....: ....:
NP_001 SGGVGLAACQI-ARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKVVGSRG
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD -VDIV-LDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPI
..: : . ... :..:.
NP_001 TIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAE
220 230 240 250 260 270
>>XP_016855856 (OMIM: 123691) PREDICTED: quinone oxidore (295 aa)
initn: 452 init1: 201 opt: 423 Z-score: 510.7 bits: 103.0 E(85289): 1e-21
Smith-Waterman score: 423; 32.3% identity (72.0% similar) in 232 aa overlap (42-266:8-238)
20 30 40 50 60 70
pF1KSD TEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFRK-AMPEPQDGE
:::: . ::: . :.: :.: :.: .
XP_016 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQ
10 20 30
80 90 100 110 120 130
pF1KSD LKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFV
. :.:.:::.: .. ..:.:. . : : .:: . .:..::.::...... ::::..
XP_016 VLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSS
40 50 60 70 80 90
140 150 160 170 180
pF1KSD NYNA-WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSA
. .. .:: . . . :::.:. ..:...::. . . ::: :.. : .. : :::::.:
XP_016 TISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD GGGVGQAVAQLCSTVPNVTVFGTASTFKHEAI--KDSVTHLFD-RNADYVQEVKRISAEG
.:::: :. :. . . .. ..:::.: . . : .... ..:. :...:....: ....:
XP_016 SGGVGLAACQI-ARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKVVGSRG
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD -VDIV-LDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPI
..: : . ... :..:.
XP_016 TIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAE
220 230 240 250 260 270
>>NP_004872 (OMIM: 605171) quinone oxidoreductase PIG3 i (332 aa)
initn: 328 init1: 183 opt: 413 Z-score: 498.0 bits: 100.8 E(85289): 5.3e-21
Smith-Waterman score: 467; 28.9% identity (62.2% similar) in 349 aa overlap (42-382:1-332)
20 30 40 50 60 70
pF1KSD TEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFRKAMPEPQDGEL
: :: . :: ..: . . : : : .::.
NP_004 MLAVHFDKPGGPENLYVKEVAKPSPGEGEV
10 20 30
80 90 100 110 120 130
pF1KSD KIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGY-EIGDRVMAFV
..: : .:: ::: :::. : :: . . :.: :: : :: . .:. .::: .::..
NP_004 LLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KSD NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAG
.. :. : .: ... ::. .....:::.: ..::. .: :.:.. : ::.:..
NP_004 PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGL
100 110 120 130 140 150
200 210 220 230 240
pF1KSD GGVGQAVAQLC---STVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQE-VKRISAEG
.::: :. :: ...: ::. :. . .. ... . .. :. . .: .. :
NP_004 SGVGTAAIQLTRMAGAIPLVTA-GSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAG
160 170 180 190 200
250 260 270 280 290 300
pF1KSD VDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKL
:...:::. :. :... : : ..::: : :. .. . :.: :
NP_004 VNLILDCIGGSYWEKNVNCLALDGRWVLYGL--MGGGDINGPL-FSKL-----------L
210 220 230 240 250
310 320 330 340 350 360
pF1KSD YEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQ---KKIKPVVDSLWALEEVKEA
......:. ::: .. . :. . .:... .. ... ::.: .. . :..::
NP_004 FKRGSLIT--SLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEA
260 270 280 290 300 310
370 380 390 400 410
pF1KSD MQRIHDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSENKERMPFIQ
. .. ::::..:.. .
NP_004 HKYMEANKNIGKIVLELPQ
320 330
>>NP_671713 (OMIM: 605171) quinone oxidoreductase PIG3 i (332 aa)
initn: 328 init1: 183 opt: 413 Z-score: 498.0 bits: 100.8 E(85289): 5.3e-21
Smith-Waterman score: 467; 28.9% identity (62.2% similar) in 349 aa overlap (42-382:1-332)
20 30 40 50 60 70
pF1KSD TEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFRKAMPEPQDGEL
: :: . :: ..: . . : : : .::.
NP_671 MLAVHFDKPGGPENLYVKEVAKPSPGEGEV
10 20 30
80 90 100 110 120 130
pF1KSD KIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGY-EIGDRVMAFV
..: : .:: ::: :::. : :: . . :.: :: : :: . .:. .::: .::..
NP_671 LLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KSD NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAG
.. :. : .: ... ::. .....:::.: ..::. .: :.:.. : ::.:..
NP_671 PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGL
100 110 120 130 140 150
200 210 220 230 240
pF1KSD GGVGQAVAQLC---STVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQE-VKRISAEG
.::: :. :: ...: ::. :. . .. ... . .. :. . .: .. :
NP_671 SGVGTAAIQLTRMAGAIPLVTA-GSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAG
160 170 180 190 200
250 260 270 280 290 300
pF1KSD VDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKL
:...:::. :. :... : : ..::: : :. .. . :.: :
NP_671 VNLILDCIGGSYWEKNVNCLALDGRWVLYGL--MGGGDINGPL-FSKL-----------L
210 220 230 240 250
310 320 330 340 350 360
pF1KSD YEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQ---KKIKPVVDSLWALEEVKEA
......:. ::: .. . :. . .:... .. ... ::.: .. . :..::
NP_671 FKRGSLIT--SLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEA
260 270 280 290 300 310
370 380 390 400 410
pF1KSD MQRIHDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSENKERMPFIQ
. .. ::::..:.. .
NP_671 HKYMEANKNIGKIVLELPQ
320 330
>>XP_006712213 (OMIM: 605171) PREDICTED: quinone oxidore (248 aa)
initn: 183 init1: 183 opt: 352 Z-score: 426.3 bits: 87.1 E(85289): 5.3e-17
Smith-Waterman score: 352; 31.0% identity (64.2% similar) in 226 aa overlap (42-263:1-224)
20 30 40 50 60 70
pF1KSD TEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFRKAMPEPQDGEL
: :: . :: ..: . . : : : .::.
XP_006 MLAVHFDKPGGPENLYVKEVAKPSPGEGEV
10 20 30
80 90 100 110 120 130
pF1KSD KIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGY-EIGDRVMAFV
..: : .:: ::: :::. : :: . . :.: :: : :: . .:. .::: .::..
XP_006 LLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KSD NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAG
.. :. : .: ... ::. .....:::.: ..::. .: :.:.. : ::.:..
XP_006 PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGL
100 110 120 130 140 150
200 210 220 230 240
pF1KSD GGVGQAVAQLC---STVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGV
.::: :. :: ...: ::. :. . .. ... . .. :. . . ... .
XP_006 SGVGTAAIQLTRMAGAIPLVTA-GSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKVQA
160 170 180 190 200
250 260 270 280 290 300
pF1KSD DIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLY
. . .:. : :... :
XP_006 N-AGECFHGANSASLLHGGPPTSAAGSGQNLPSDRNPGGP
210 220 230 240
>>NP_001193731 (OMIM: 605171) quinone oxidoreductase PIG (248 aa)
initn: 183 init1: 183 opt: 352 Z-score: 426.3 bits: 87.1 E(85289): 5.3e-17
Smith-Waterman score: 352; 31.0% identity (64.2% similar) in 226 aa overlap (42-263:1-224)
20 30 40 50 60 70
pF1KSD TEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFRKAMPEPQDGEL
: :: . :: ..: . . : : : .::.
NP_001 MLAVHFDKPGGPENLYVKEVAKPSPGEGEV
10 20 30
80 90 100 110 120 130
pF1KSD KIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGY-EIGDRVMAFV
..: : .:: ::: :::. : :: . . :.: :: : :: . .:. .::: .::..
NP_001 LLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KSD NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAG
.. :. : .: ... ::. .....:::.: ..::. .: :.:.. : ::.:..
NP_001 PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGL
100 110 120 130 140 150
200 210 220 230 240
pF1KSD GGVGQAVAQLC---STVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGV
.::: :. :: ...: ::. :. . .. ... . .. :. . . ... .
NP_001 SGVGTAAIQLTRMAGAIPLVTA-GSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKVQA
160 170 180 190 200
250 260 270 280 290 300
pF1KSD DIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLY
. . .:. : :... :
NP_001 N-AGECFHGANSASLLHGGPPTSAAGSGQNLPSDRNPGGP
210 220 230 240
419 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 06:41:34 2016 done: Thu Nov 3 06:41:36 2016
Total Scan time: 9.150 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]