Result of FASTA (ccds) for
pF1KSDA1498
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1498, 3043 aa
1>>>pF1KSDA1498 3043 - 3043 aa - 3043 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 14.5005+/-0.00133; mu= -11.2064+/- 0.081
mean_var=672.1905+/-140.579, 0's: 0 Z-trim(115.3): 125 B-trim: 518 in 2/54
Lambda= 0.049468
statistics sampled from 15778 (15896) to 15778 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.488), width: 16
Scan time: 11.770
The best scores are: opt bits E(32554)
CCDS31929.2 EP400 gene_id:57634|Hs108|chr12 (3123) 9982 729.9 5.8e-209
CCDS10689.2 SRCAP gene_id:10847|Hs108|chr16 (3230) 1582 130.4 1.7e-28
>>CCDS31929.2 EP400 gene_id:57634|Hs108|chr12 (3123 aa)
initn: 12545 init1: 9954 opt: 9982 Z-score: 3865.0 bits: 729.9 E(32554): 5.8e-209
Smith-Waterman score: 19695; 97.3% identity (97.3% similar) in 3076 aa overlap (1-2995:1-3075)
10 20 30 40 50 60
pF1KSD MHHGTGPQNVQHQLQRSRACPGSEGEEQPAHPNPPPSPAAPFAPSASPSAPQSPSYQIQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MHHGTGPQNVQHQLQRSRACPGSEGEEQPAHPNPPPSPAAPFAPSASPSAPQSPSYQIQQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LMNRSPATGQNVNITLQSVGPVVGGNQQITLAPLPLPSPTSPGFQFSAQPRRFEHGSPSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LMNRSPATGQNVNITLQSVGPVVGGNQQITLAPLPLPSPTSPGFQFSAQPRRFEHGSPSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD IQVTSPLSQQVQTQSPTQPSPGPGQALQNVRAGAPGPGLGLCSSSPTGGFVDASVLVRQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 IQVTSPLSQQVQTQSPTQPSPGPGQALQNVRAGAPGPGLGLCSSSPTGGFVDASVLVRQI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SLSPSSGGHFVFQDGSGLTQIAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SLSPSSGGHFVFQDGSGLTQIAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD SPAAAGGAGLQPLASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SPAAAGGAGLQPLASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LLPGAGGAAGFGMTSPPPPTSPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LLPGAGGAAGFGMTSPPPPTSPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASPE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD MAQMRKQCLDYHYQEMQALKEVFKEYLIELFFLQHFQGNMMDFLAFKKKHYAPLQAYLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAQMRKQCLDYHYQEMQALKEVFKEYLIELFFLQHFQGNMMDFLAFKKKHYAPLQAYLRQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD NDLDIEEEEEEEEEEEEKSEVINDEQQALAGSLVAGAGSTVETDLFKRQQAMPSTGMAEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NDLDIEEEEEEEEEEEEKSEVINDEQQALAGSLVAGAGSTVETDLFKRQQAMPSTGMAEQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD SKRPRLEVGHQGVVFQHPGADAGVPLQQLMPTAQGGMPPTPQAAQLAGQRQSQQQYDPST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SKRPRLEVGHQGVVFQHPGADAGVPLQQLMPTAQGGMPPTPQAAQLAGQRQSQQQYDPST
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD GPPVQNAASLHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GPPVQNAASLHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD VPIPAPPSSQLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VPIPAPPSSQLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD PLPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PLPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD AQNATSSQDSSQDTLTEQITLENQVHQRIAELRKAGLWSQRRLPKLQEAPRPKSHWDYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 AQNATSSQDSSQDTLTEQITLENQVHQRIAELRKAGLWSQRRLPKLQEAPRPKSHWDYLL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD EEMQWMATDFAQERRWKVAAAKKLVRTVVRHHEEKQLREERGKKEEQSRLRRIAASTARE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EEMQWMATDFAQERRWKVAAAKKLVRTVVRHHEEKQLREERGKKEEQSRLRRIAASTARE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD IECFWSNIEQVVEIKLRVELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 IECFWSNIEQVVEIKLRVELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGR
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD KRKASISLTDDEVDDEEETIEEEEANEGVVDHQTELSNLAKEAELPLLDLMKLYEGAFLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KRKASISLTDDEVDDEEETIEEEEANEGVVDHQTELSNLAKEAELPLLDLMKLYEGAFLP
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD SSQWPRPKPDGEDTSGEEDADDCPGDRESRKDLVLIDSLFIMDQFKAAERMNIGKPNAKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SSQWPRPKPDGEDTSGEEDADDCPGDRESRKDLVLIDSLFIMDQFKAAERMNIGKPNAKD
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD IADVTAVAEAILPKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 IADVTAVAEAILPKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILAD
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD EAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHR
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KSD ELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVF
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KSD TLQSQQRLLLIDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVIRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TLQSQQRLLLIDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVIRL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KSD HRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHFVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 HRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHFVN
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KSD VLSILVRLQRICNHPGLVEPRHPGSSYVAGPLEYPSASLILKALERDFWKEADLSMFDLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VLSILVRLQRICNHPGLVEPRHPGSSYVAGPLEYPSASLILKALERDFWKEADLSMFDLI
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KSD GLENKITRHEAELLSKKKIPRKLMEEISTSAAPAARPAAAKLKASRLFQPVQYGQKPEGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GLENKITRHEAELLSKKKIPRKLMEEISTSAAPAARPAAAKLKASRLFQPVQYGQKPEGR
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480
pF1KSD TVAFPSTHPPRTAAPTTASAAPQGPLRGRPPIATFSANPEAKG-----------------
::::::::::::::::::::::::::::::::::::::::::.
CCDS31 TVAFPSTHPPRTAAPTTASAAPQGPLRGRPPIATFSANPEAKAAAAPFQTSQASASAPRH
1450 1460 1470 1480 1490 1500
pF1KSD ------------------------------------------------------------
CCDS31 QPASASSTAASPAHPAKLRAQTTAQASTPGQPPPQPQAPSHAAGQSALPQRLVLPSQAQA
1510 1520 1530 1540 1550 1560
1490 1500 1510 1520 1530
pF1KSD ----GEVVKIAQLASITGPQSRVAQPETPVTLQFQGSKFTLSHSQLRQLTAGQPLQLQGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RLPSGEVVKIAQLASITGPQSRVAQPETPVTLQFQGSKFTLSHSQLRQLTAGQPLQLQGS
1570 1580 1590 1600 1610 1620
1540 1550 1560 1570 1580 1590
pF1KSD VLQIVSAPGQPYLRAPGPVVMQTVSQAGAVHGALGSKPPAGGPSPAPLTPQVGVPGRVAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VLQIVSAPGQPYLRAPGPVVMQTVSQAGAVHGALGSKPPAGGPSPAPLTPQVGVPGRVAV
1630 1640 1650 1660 1670 1680
1600 1610 1620 1630 1640 1650
pF1KSD NALAVGEPGTASKPASPIGGPTQEEKTRLLKERLDQIYLVNERRCSQAPVYGRDLLRICA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NALAVGEPGTASKPASPIGGPTQEEKTRLLKERLDQIYLVNERRCSQAPVYGRDLLRICA
1690 1700 1710 1720 1730 1740
1660 1670 1680 1690 1700 1710
pF1KSD LPSHGRVQWRGSLDGRRGKEAGPAHSYTSSSESPSELMLTLCRCGESLQDVIDRVAFVIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LPSHGRVQWRGSLDGRRGKEAGPAHSYTSSSESPSELMLTLCRCGESLQDVIDRVAFVIP
1750 1760 1770 1780 1790 1800
1720 1730 1740 1750 1760 1770
pF1KSD PVVAAPPSLRVPRPPPLYSHRMRILRQGLREHAAPYFQQLRQTTAPRLLQFPELRLVQFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PVVAAPPSLRVPRPPPLYSHRMRILRQGLREHAAPYFQQLRQTTAPRLLQFPELRLVQFD
1810 1820 1830 1840 1850 1860
1780 1790 1800 1810 1820 1830
pF1KSD SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL
1870 1880 1890 1900 1910 1920
1840 1850 1860 1870 1880 1890
pF1KSD MRSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MRSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDI
1930 1940 1950 1960 1970 1980
1900 1910 1920 1930 1940 1950
pF1KSD HIYRLVSGNSIEEKLLKNGTKDLIREVAAQGNDYSMAFLTQRTIQELFEVYSPMDDAGFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 HIYRLVSGNSIEEKLLKNGTKDLIREVAAQGNDYSMAFLTQRTIQELFEVYSPMDDAGFP
1990 2000 2010 2020 2030 2040
1960 1970 1980 1990 2000 2010
pF1KSD VKAEEFVVLSQEPSVTETIAPKIARPFIEALKSIEYLEEDAQKSAQEGVLGPHTDALSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VKAEEFVVLSQEPSVTETIAPKIARPFIEALKSIEYLEEDAQKSAQEGVLGPHTDALSSD
2050 2060 2070 2080 2090 2100
2020 2030 2040 2050 2060 2070
pF1KSD SENMPCDEEPSQLEELADFMEQLTPIEKYALNYLELFHTSIEQEKERNSEDAVMTAVRAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SENMPCDEEPSQLEELADFMEQLTPIEKYALNYLELFHTSIEQEKERNSEDAVMTAVRAW
2110 2120 2130 2140 2150 2160
2080 2090 2100 2110 2120 2130
pF1KSD EFWNLKTLQEREARLRLEQEEAELLTYTREDAYSMEYVYEDVDGQTEVMPLWTPPTPPQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EFWNLKTLQEREARLRLEQEEAELLTYTREDAYSMEYVYEDVDGQTEVMPLWTPPTPPQD
2170 2180 2190 2200 2210 2220
2140 2150 2160 2170 2180 2190
pF1KSD DSDIYLDSVMCLMYEATPIPEAKLPPVYVRKERKRHKTDPSAAGRKKKQRHGEAVVPPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DSDIYLDSVMCLMYEATPIPEAKLPPVYVRKERKRHKTDPSAAGRKKKQRHGEAVVPPRS
2230 2240 2250 2260 2270 2280
2200 2210 2220 2230 2240 2250
pF1KSD LFDRATPGLLKIRREGKEQKKNILLKQQVPFAKPLPTFAKPTAEPGQDNPEWLISEDWAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LFDRATPGLLKIRREGKEQKKNILLKQQVPFAKPLPTFAKPTAEPGQDNPEWLISEDWAL
2290 2300 2310 2320 2330 2340
2260 2270 2280 2290 2300 2310
pF1KSD LQAVKQLLELPLNLTIVSPAHTPNWDLVSDVVNSCSRIYRSSKQCRNRYENVIIPREEGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LQAVKQLLELPLNLTIVSPAHTPNWDLVSDVVNSCSRIYRSSKQCRNRYENVIIPREEGK
2350 2360 2370 2380 2390 2400
2320 2330 2340 2350 2360 2370
pF1KSD SKNNRPLRTSQIYAQDENATHTQLYTSHFDLMKMTAGKRSPPIKPLLGMNPFQKNPKHAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SKNNRPLRTSQIYAQDENATHTQLYTSHFDLMKMTAGKRSPPIKPLLGMNPFQKNPKHAS
2410 2420 2430 2440 2450 2460
2380 2390 2400 2410 2420 2430
pF1KSD VLAESGINYDKPLPPIQVASLRAERIAKEKKALADQQKAQQPAVAQPPPPQPQPPPPPQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VLAESGINYDKPLPPIQVASLRAERIAKEKKALADQQKAQQPAVAQPPPPQPQPPPPPQQ
2470 2480 2490 2500 2510 2520
2440 2450 2460 2470 2480 2490
pF1KSD PPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAITTGGSAAVLAGTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAITTGGSAAVLAGTI
2530 2540 2550 2560 2570 2580
2500 2510 2520 2530 2540 2550
pF1KSD KTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAPAQVVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAPAQVVH
2590 2600 2610 2620 2630 2640
2560 2570 2580 2590 2600 2610
pF1KSD TQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTTNLTPVQTPARSLVPQVSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTTNLTPVQTPARSLVPQVSQA
2650 2660 2670 2680 2690 2700
2620 2630 2640 2650 2660 2670
pF1KSD TGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTTTSQVQVPQ
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
CCDS31 TGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ-TTTTSQVQVPQ
2710 2720 2730 2740 2750
2680 2690 2700 2710 2720 2730
pF1KSD IQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 IQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPP
2760 2770 2780 2790 2800 2810
2740 2750 2760 2770 2780 2790
pF1KSD QQQSPQLTTVTAPRPGALLTGTTVANLQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QQQSPQLTTVTAPRPGALLTGTTVANLQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAK
2820 2830 2840 2850 2860 2870
2800 2810 2820 2830 2840 2850
pF1KSD PPVVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PPVVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQ
2880 2890 2900 2910 2920 2930
2860 2870 2880 2890 2900 2910
pF1KSD QQKAIQPQAAQGPAAVQQKITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQAQKLAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QQKAIQPQAAQGPAAVQQKITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQAQKLAGA
2940 2950 2960 2970 2980 2990
2920 2930 2940 2950 2960 2970
pF1KSD QQVQTQIQVAKLPQVVQQQTPVASIQQVASASQQASPQTVALTQATAAGQQVQMIPAVTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QQVQTQIQVAKLPQVVQQQTPVASIQQVASASQQASPQTVALTQATAAGQQVQMIPAVTA
3000 3010 3020 3030 3040 3050
2980 2990 3000 3010 3020 3030
pF1KSD TAQVVQQKLIQQQVVTTASAPLQTPGAPNPAQVPASSDSPSQQPKLQMRVPAVRLKTPTK
::::::::::::::::
CCDS31 TAQVVQQKLIQQQVVTTASAPLQTPGAPNPAQVPASSDSPSQQPKLQMRVPAVRLKTPTK
3060 3070 3080 3090 3100 3110
>>CCDS10689.2 SRCAP gene_id:10847|Hs108|chr16 (3230 aa)
initn: 3088 init1: 863 opt: 1582 Z-score: 624.9 bits: 130.4 E(32554): 1.7e-28
Smith-Waterman score: 2057; 32.9% identity (56.3% similar) in 1427 aa overlap (633-1787:1-1389)
610 620 630 640 650 660
pF1KSD IPAPPSSQLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQM-VASTRLPVDPAPPCPRP
.:.: . ::. : .:.. :
CCDS10 MQSSPSPAHPQLPVLQTQMVSDGMTGSN--
10 20
670 680 690 700 710
pF1KSD LPTSSTSSLAPVSGSGPGPSP---ARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQ
:.: .:: .:.:... : :: :..: .. : . . : :. . . . .: .
CCDS10 -PVSPASSSSPASSGAGGISPQHIAQDSSLDGPPGPPDGATVPLEGFS--LSQAADLANK
30 40 50 60 70 80
720 730 740 750 760 770
pF1KSD SPAQNATSSQDSSQDTLTEQITLENQVHQRIAELRKAGLWSQRRLPKLQEAPRPKSHWDY
.: . ..:. ..:: : ... ::::::: :.:: .::::. : ::::.::::
CCDS10 GP------KWEKSHAEIAEQAKHEAEIETRIAELRKEGFWSLKRLPKVPEPPRPKGHWDY
90 100 110 120 130
780 790 800 810 820 830
pF1KSD LLEEMQWMATDFAQERRWKVAAAKKLVRTVVRHHEEKQLREERGKKEEQSRLRRIAASTA
: :::::...::::::::: ..:.:.:: :.:::::.. .:::...:::..:::::.. :
CCDS10 LCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMA
140 150 160 170 180 190
840 850 860 870
pF1KSD REIECFWSNIEQVVEIKLRVELEEKRKKALNL---------QKVS---------------
.... ::::.:.::..: . .:::::::::.: .: :
CCDS10 KDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSLNQPLTSSK
200 210 220 230 240 250
pF1KSD ----------------------------------------------------------RR
::
CCDS10 AGSSPCLGSSSAASSPPPPASRLDDEDGDFQPQEDEEEDDEETIEVEEQQEGNDAEAQRR
260 270 280 290 300 310
880 890
pF1KSD GKEL-RPKGFDALQE--------------------SSLDS--------------------
:: : .: :.: :: ::
CCDS10 EIELLRREGELPLEELLRSLPPQLLEGPSSPSQTPSSHDSDTRDGPEEGAEEEPPQVLEI
320 330 340 350 360 370
900 910 920 930 940
pF1KSD -----GMSGRKRKA--------SISLTDDEVDDEEETIEEEEANEGVVDHQTELSNLAKE
... :... .. ...:..:::.:: :: :: ::: :::.::.:
CCDS10 KPPPSAVTQRNKQPWHPDEDDEEFTANEEEAEDEEDTIAAEEQLEGEVDHAMELSELARE
380 390 400 410 420 430
950 960 970
pF1KSD AELPLLDLMKLYEGAFLPSS--------------------QWP--RPKPDGEDTSGE---
.:: . .:.. : ::. :.: . : .: ::.:..
CCDS10 GELSMEELLQQYAGAYAPGSGSSEDEDEDEVDANSSDCEPEGPVEAEEPPQEDSSSQSDS
440 450 460 470 480 490
980 990 1000
pF1KSD -----EDADD----------------------------CPGDRESRKDLVLIDSLFIMDQ
:: .: .:.: . : .. :. :.
CCDS10 VEDRSEDEEDEHSEEEETSGSSASEESESEESEDAQSQSQADEEEEDDDFGVEYLLARDE
500 510 520 530 540 550
1010 1020 1030 1040 1050
pF1KSD FKAAERMNIGKPNA--------KDIADVTAVAEAILPKGSARVTTSVKFNAPSLLYGALR
.. . : :. :.:.:..:.::.. ::: . .::.:: : :: : ::
CCDS10 EQSEADAGSGPPTPGPTTLGPKKEITDIAAAAESLQPKGYTLATTQVKTPIPLLLRGQLR
560 570 580 590 600 610
1060 1070 1080 1090 1100 1110
pF1KSD DYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNI
.::.::::::. .:.:.:::::::: :::::.: :...:::::..:::::::..: . .
CCDS10 EYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVM
620 630 640 650 660 670
1120 1130 1140 1150 1160 1170
pF1KSD LKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVR
:.::.:::::::..:::.: :...: : ::: :..::.:::::::: .. :: :
CCDS10 LNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKN
680 690 700 710 720 730
1180 1190 1200 1210 1220 1230
pF1KSD WKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFLVPGIS--
:. :..:: : .:.. ..:.......::.:::: .::.:...:::...:::.: .
CCDS10 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQS
740 750 760 770 780 790
1240 1250 1260 1270 1280 1290
pF1KSD ----RPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKC
. ..:.:: . : ::.: . .: :::.: .::.:::.: :::::. ::::::..:
CCDS10 HREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRC
800 810 820 830 840 850
1300 1310 1320 1330 1340 1350
pF1KSD RLSNRQKALYEDVILQPGTQEALKSGHFVNVLSILVRLQRICNHPGLVEPRHPGSSYVAG
:::.::. ::.: . : :.:.: .:::..:..::..:...::::.: .:: : ...
CCDS10 RLSKRQRCLYDDFMAQTTTKETLATGHFMSVINILMQLRKVCNHPNLFDPRPVTSPFITP
860 870 880 890 900 910
1360 1370 1380 1390 1400
pF1KSD PLEYPSASLILKALERDFWKEADLSMFDLIGLENKITRHEAE-LLSKKKIPRKLMEEIST
. . .:::.:.: . .. :.. :::::::....:.::. .: .... :... :..:
CCDS10 GICFSTASLVLRATDVHPLQRIDMGRFDLIGLEGRVSRYEADTFLPRHRLSRRVLLEVAT
920 930 940 950 960 970
1410 1420 1430 1440 1450 1460
pF1KSD SAAPAARPAAAKLKASRLFQPVQYGQKPEGRTVAFPSTHPPRTAAPTTASAAPQGPLRGR
. : :: .:.:..:..::: : :::::. .. :: :: ::. :
CCDS10 APDPPPRPKPVKMKVNRMLQPV---PKQEGRTVVV--VNNPR---------APLGPVPVR
980 990 1000 1010 1020
1470 1480 1490 1500 1510 1520
pF1KSD PPIAT-FSANPEAKGGEVVKI--AQL---ASITGPQSRVA-QPETPVTLQ-FQGSKFTLS
:: . .::.: : : .. :.: :: .:: : .: :: : .: .. .:
CCDS10 PPPGPELSAQPTP--GPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLP
1030 1040 1050 1060 1070 1080
1530 1540 1550
pF1KSD H---SQLRQLTA-GQP----LQLQGSV-----LQIVSAPG-----QPYLRAPG----PVV
. : : :.. ..: :.:. . :. . :: .: :: :..
CCDS10 QVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAA
1090 1100 1110 1120 1130 1140
1560 1570 1580 1590 1600 1610
pF1KSD MQTVSQAGAVHGALGSKPPAGGPSPAP----LTP--QVGVP-GRVAVNALAVGEPGT-AS
:.: . :. : . :: :.::: :.: :. .: :.: ...:. .. :.
CCDS10 ATTTSTTTAT--ATTTAVPA--PTPAPQRLILSPDMQARLPSGEV----VSIGQLASLAQ
1150 1160 1170 1180 1190
1620 1630 1640 1650 1660
pF1KSD KPASPIGG--PT----QEEKTRLLKERLDQIYLVNERRCSQAPVY---GRDLLRICALPS
.:.. :: : : .: : .. :. . . : .. :. . .. . :.
CCDS10 RPVANAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLISQPA
1200 1210 1220 1230 1240 1250
1670 1680 1690 1700 1710
pF1KSD H-GRVQWRGSLDGRRGKEAGPAHSYTSSSESPSELMLTLC--RCGESLQDVIDRVAFVI-
: . .: . : . :. : :.. .:. : : : . .. . : .:.
CCDS10 HVALIQAVAPTPGPTPVSVLPS-STPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVR
1260 1270 1280 1290 1300 1310
1720 1730 1740 1750 1760 1770
pF1KSD -PP---VVAAPPSLRVPRPP----PLYSHRMRILRQGLREHAAPYFQQLRQTTAPRLLQF
: .. .:: .:::: : . : : . .: . : :
CCDS10 QAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPG--RLPTPTLGTARAPMPTPTLVR
1320 1330 1340 1350 1360 1370
1780 1790 1800 1810 1820 1830
pF1KSD PELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDEN
: :.::. : .. : :
CCDS10 PLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVS
1380 1390 1400 1410 1420 1430
>--
initn: 885 init1: 735 opt: 1176 Z-score: 468.3 bits: 101.5 E(32554): 9.2e-20
Smith-Waterman score: 1185; 25.9% identity (50.8% similar) in 1554 aa overlap (1399-2844:1668-3149)
1370 1380 1390 1400 1410 1420
pF1KSD WKEADLSMFDLIGLENKITRHEAELLSKKKIPRKLMEEISTSAAPAARPAAAKLKASRLF
.: : ::.. : : : .:
CCDS10 PGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPS
1640 1650 1660 1670 1680 1690
1430 1440 1450 1460 1470 1480
pF1KSD QPVQYGQ-KPEGRTVAFP----STHPPRTAAPTTA---SAAPQGPLRGRPPIATFSANPE
: .. : .:.: :: : : . .:: : : :: :: .. : :
CCDS10 QTLSLGTGNPQG---PFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPL
1700 1710 1720 1730 1740 1750
1490 1500 1510 1520 1530
pF1KSD AKGGEVVKIAQLASITGPQSRVAQPETPVTLQFQGSKFTLSHSQLRQL--TAGQPLQLQG
: .. : . .: : :. .:...: .::: . . : .:.: : :
CCDS10 APASPVGPAPAHTLTLAPASSSASLLAPASVQ----TLTLSPAPVPTLGPAAAQTLALAP
1760 1770 1780 1790 1800 1810
1540 1550 1560 1570 1580 1590
pF1KSD SVLQIVSAPGQPYLRAPGPVVMQTVSQAGAVHGALGSKPPAGGPSPAPLTPQVGVPGRVA
. : .: .: . :: ..: :. . .. :. :.. : :: . : :. .
CCDS10 ASTQ------SPASQASSLVV--SASGAAPLPVTMVSRLPVSKDEPDTLTLRSGPPSPPS
1820 1830 1840 1850 1860
1600 1610 1620 1630 1640 1650
pF1KSD VNALAVGEPGTASKPASPIGGP-----TQEEKTRLLKERLDQIYLVNERRCSQAPVYGRD
. : . : : .: : .: .:.. : .:::..:. ..: . . ::::: .
CCDS10 T-ATSFGGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSEAHGALAPVYGTE
1870 1880 1890 1900 1910 1920
1660 1670 1680 1690 1700 1710
pF1KSD LLRICALPSHGRVQWRGSLDGRRGKEAGPAH-SYTSSSESPSELMLTLCRCGESLQDVID
.: .:.:: : .: : :. ::.: .. . .:. . .: . ..:...:.
CCDS10 VLDFCTLP-----QPVASPIGPRS--PGPSHPTFWTYTEAAHRAVLFPQQRLDQLSEIIE
1930 1940 1950 1960 1970
1720 1730 1740 1750 1760 1770
pF1KSD RVAFVIPPVVAAPPSLRVPRPPPLYSHRMRILRQGLREHAAPYFQQLRQTTAPRLLQFPE
: ::.::: : ::::.. .::: . :. ... : . : . :.. . :::.
CCDS10 RFIFVMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLASELWPRARPLHRIVCNMRTQFPD
1980 1990 2000 2010 2020 2030
1780 1790 1800 1810 1820 1830
pF1KSD LRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENAS
:::.:.: :::..::.::..::.::.::::..:: :::.::.::..: :.:.: ..
CCDS10 LRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTR
2040 2050 2060 2070 2080 2090
1840 1850 1860 1870 1880 1890
pF1KSD SEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDR
:::: ::. :: :.:::: ::::.: .:.::. ::::::::.: ::.:::.::. : :
CCDS10 VEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHR
2100 2110 2120 2130 2140 2150
1900 1910 1920 1930 1940 1950
pF1KSD IGRCKDIHIYRLVSGNSIEEKLLKNGT-KDLIREVAAQGNDYSMAFLTQRTIQELFEVYS
::. .:.:::::.: ..::..::... : .. ..: .:.... :.. :.::.:::..
CCDS10 IGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDM--
2160 2170 2180 2190 2200 2210
1960 1970 1980 1990 2000 2010
pF1KSD PMDDAGFPVKAEEFVVLSQEPSVTETIAPKIARPFIEALKSIEYLEEDAQKSAQEGVLGP
:... : .. : : ::.: : .. . .:: : ::: . ..: .
CCDS10 PLEE---PSSSS---VPSAPEEEEETVASKQTHILEQALCRAED-EEDIRAATQAKAEQV
2220 2230 2240 2250 2260
2020 2030 2040 2050
pF1KSD HTDALSSDSENMPC------------DEEPSQLE-ELADFMEQLTPIEKYALNYLELFHT
: ......: ::: :. : :.: ..:::::::.::...::
CCDS10 AELAEFNENDGFPAGEGEEAGRPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLE
2270 2280 2290 2300 2310 2320
2060 2070 2080 2090 2100 2110
pF1KSD SIEQEKERNSEDAVMTAVRAWEFWNLKTLQEREARLRLEQEEAELLTYTREDA-------
. .:. ...:. : .: . . : .: .:: ::: : :..
CCDS10 EVSREELKQAEEQVEAARKDLD-------QAKEEVFRLPQEEEEGPGAGDESSCGTGGGT
2330 2340 2350 2360 2370
2120 2130 2140 2150 2160
pF1KSD --YSMEYVYEDVDGQTEVMPLWTPPTPPQDDSDIYLDSVMCLMYEATPIPEAKLPPVYVR
: . . : : . : . . :. .:: : . :. :
CCDS10 HRRSKKAKAPERPGTRVSERLRGARAETQGANHTPVISAHQTRSTTTP-P--RCSPARER
2380 2390 2400 2410 2420 2430
2170 2180 2190 2200 2210 2220
pF1KSD KERKRHKTDPSAAGRKKKQRHGEAVVP-PRSL-FDRATPG---LLKIRREGKEQKKNILL
: . :. :. :.:: : : ..:. .: .. . . .
CCDS10 VPRPAPRPRPTPASAPAAI---PALVPVPVSAPVPISAPNPITILPVHILPSPPPPSQIP
2440 2450 2460 2470 2480 2490
2230 2240 2250 2260 2270 2280
pF1KSD KQQVPFAKPLPTFAKPTAEPGQDNPEWLISEDWALLQAVKQLLELPLNLTIVS-P-AHTP
. : : :. . : :. :.. . :: . .. :.. .... : . :
CCDS10 PCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPPSV---PISASVTNLPLGLRP
2500 2510 2520 2530 2540
2290 2300 2310 2320 2330 2340
pF1KSD NWDLVSDVVNSCSRIYRSSKQCRNRYENVIIPREEGKSKNNRPLRTSQIYAQDENATHTQ
. .: .... : . .: . ..: :. :. . . ....: . :
CCDS10 EAELCAQALASPESLELASVASSETSSLSLVP-----PKDLLPVAVEILPVSEKNLSLTP
2550 2560 2570 2580 2590 2600
2350 2360 2370 2380 2390
pF1KSD LYTS-HFDLMKMTAGKR--SPPIKPLLGMNPFQKNPKHASVLAES-GINY------DKPL
: .. .. :.. .: .. . .. . ..:: :.. :.::
CCDS10 SAPSLTLEAGSIPNGQEQEAPDSAEGTTLTVLPEGEELPLCVSESNGLELPPSAASDEPL
2610 2620 2630 2640 2650 2660
2400 2410 2420 2430 2440
pF1KSD PPIQVASLRAERIAKEKKALADQQKAQQ---PAVAQPP--------PPQPQPPPPPQQPP
:. .:.... : .. .: :. :: : : :.: ::..
CCDS10 QEPLEADRTSEELTEAKTPTSSPEKPQELVTAEVAAPSTSSSATSSPEGPSPARPPRRRT
2670 2680 2690 2700 2710 2720
2450 2460 2470 2480 2490
pF1KSD PPLPQPQAAGS----QPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAITTGGSAAVLAG
. .. :. ::: :: ... : . . . . : :...... :
CCDS10 SADVEIRGQGTGRPGQPP-GPKVLRKLPGRLVTVVEEKELVRRRRQQ---RGAASTLVPG
2730 2740 2750 2760 2770 2780
2500 2510 2520 2530 2540 2550
pF1KSD TIKTSVTGTSMPTGAVSGNVIVNTIAG-VPAATFQSINKRLASPVAPG---ALTTPGGSA
. .::.. : . ..:: :.: :: .:. .: : . ::..
CCDS10 VSETSASPGSPSVRSMSGPESSPPIGGPCEAAPSSSLPTPPQQPFIARRHIELGVTGGGS
2790 2800 2810 2820 2830 2840
2560 2570 2580 2590
pF1KSD P-----AQVVHTQP--------PPRAVGSPATA------TPDLVSMATTQGVRAVTSVTA
: : .. : : ::. ::: : .:. . . :.:. : . .
CCDS10 PENGDGALLAITPPAVKRRRGRPPKKNRSPADAGRGVDEAPSSTLKGKTNGADPVPGPET
2850 2860 2870 2880 2890 2900
2600 2610 2620 2630 2640 2650
pF1KSD SAVVTTNLTPVQTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQ
:. : : :. :: :. :. ..:.. . : . . .. .
CCDS10 LIVADPVLEPQLIPG----PQPLGPQPVHRPNPLLSPVE-KRRRGRPPKARDLPIPGTIS
2910 2920 2930 2940 2950
2660 2670 2680 2690 2700 2710
pF1KSD QQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQ
. . ..... : . . .: . :. : : . :.: ::.
CCDS10 SAGDGNSESRTQPPPHPSPLTPLPPLL---VCPTATVANTVTTVTISTSPPKRKRGRPPK
2960 2970 2980 2990 3000 3010
2720 2730 2740 2750 2760
pF1KSD -PPPPQAQSAPPQPTAQVQVQTS------QPPQQQSPQLTTVTAPRPGALLTGTTVANLQ
:: :. .. : ...: : . :: :. . . . . :: . :.
CCDS10 NPPSPRPSQLPVLDRDSTSVLESCGLGRRRQPQGQGESEGSSSDEDGSRPLTRLARLRLE
3020 3030 3040 3050 3060 3070
2770 2780 2790 2800 2810 2820
pF1KSD VA--RLTRVPTSQLQA--QGQMQTQAPQPAQVALAKPPVVSVPAAVVSS---PGVTTLPM
. : . :.. : : ... :. . :. :::::. . :. :: . :.
CCDS10 AEGMRGRKSGGSMVVAVIQDDLDLADSGPGGLELT-PPVVSLTPKLRSTRLRPGSLVPPL
3080 3090 3100 3110 3120 3130
2830 2840 2850 2860 2870 2880
pF1KSD NVAGISVAIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAAQGPAAVQQKIT
.. . :.: :: : ..:
CCDS10 ETEKL------PRKRAGAPVGGSPGLAKRGRLQPPSPLGPEGSVEESEAEASGEEEEGDG
3140 3150 3160 3170 3180
3043 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 06:29:31 2016 done: Thu Nov 3 06:29:34 2016
Total Scan time: 11.770 Total Display time: 0.890
Function used was FASTA [36.3.4 Apr, 2011]