Result of FASTA (omim) for
pF1KSDA1465
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1465, 745 aa
1>>>pF1KSDA1465 745 - 745 aa - 745 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5062+/-0.000345; mu= 6.9933+/- 0.022
mean_var=209.2700+/-42.788, 0's: 0 Z-trim(121.7): 347 B-trim: 1732 in 1/61
Lambda= 0.088659
statistics sampled from 38214 (38632) to 38214 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.761), E-opt: 0.2 (0.453), width: 16
Scan time: 11.650
The best scores are: opt bits E(85289)
XP_011520143 (OMIM: 614179) PREDICTED: immunoglobu ( 745) 5053 659.3 1.6e-188
NP_001123610 (OMIM: 614179) immunoglobulin superfa ( 745) 5053 659.3 1.6e-188
NP_065902 (OMIM: 614179) immunoglobulin superfamil ( 745) 5053 659.3 1.6e-188
NP_001123608 (OMIM: 614179) immunoglobulin superfa ( 745) 5053 659.3 1.6e-188
NP_001123609 (OMIM: 614179) immunoglobulin superfa ( 745) 5053 659.3 1.6e-188
XP_011520142 (OMIM: 614179) PREDICTED: immunoglobu ( 745) 5053 659.3 1.6e-188
XP_016877935 (OMIM: 614179) PREDICTED: immunoglobu ( 468) 3176 419.0 2.1e-116
NP_005536 (OMIM: 602059) immunoglobulin superfamil ( 428) 1160 161.1 8.4e-39
NP_958934 (OMIM: 602059) immunoglobulin superfamil ( 428) 1160 161.1 8.4e-39
NP_001013675 (OMIM: 613505) leucine-rich repeat-co ( 334) 400 63.8 1.3e-09
NP_036425 (OMIM: 269400,605158) peroxidasin homolo (1479) 404 64.9 2.8e-09
XP_016864334 (OMIM: 603746) PREDICTED: slit homolo (1495) 390 63.1 9.6e-09
XP_011512211 (OMIM: 603746) PREDICTED: slit homolo (1499) 390 63.1 9.6e-09
XP_006714049 (OMIM: 603746) PREDICTED: slit homolo (1509) 390 63.1 9.7e-09
NP_001276065 (OMIM: 603746) slit homolog 2 protein (1521) 390 63.1 9.7e-09
NP_001276064 (OMIM: 603746) slit homolog 2 protein (1525) 390 63.1 9.8e-09
NP_004778 (OMIM: 603746) slit homolog 2 protein is (1529) 390 63.1 9.8e-09
XP_005248268 (OMIM: 603746) PREDICTED: slit homolo (1533) 390 63.1 9.8e-09
NP_003052 (OMIM: 603742) slit homolog 1 protein pr (1534) 383 62.2 1.8e-08
NP_076941 (OMIM: 612810) leucine-rich repeat and f ( 635) 370 60.2 3e-08
XP_005274296 (OMIM: 612810) PREDICTED: leucine-ric ( 635) 370 60.2 3e-08
NP_003053 (OMIM: 603745) slit homolog 3 protein is (1523) 355 58.6 2.2e-07
NP_001258875 (OMIM: 603745) slit homolog 3 protein (1530) 355 58.6 2.2e-07
XP_016865268 (OMIM: 603745) PREDICTED: slit homolo (1460) 353 58.4 2.5e-07
NP_065913 (OMIM: 612807) leucine-rich repeat and f ( 771) 346 57.2 2.9e-07
XP_016882522 (OMIM: 612807) PREDICTED: leucine-ric ( 771) 346 57.2 2.9e-07
XP_005259159 (OMIM: 612807) PREDICTED: leucine-ric ( 771) 346 57.2 2.9e-07
XP_005264764 (OMIM: 269400,605158) PREDICTED: pero (1455) 349 57.8 3.6e-07
NP_001010847 (OMIM: 615212) leucine-rich repeat-co ( 294) 335 55.5 3.7e-07
XP_016876619 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 324 54.4 1.8e-06
XP_016876622 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 324 54.4 1.8e-06
NP_001333072 (OMIM: 604807) leucine-rich repeat tr ( 660) 324 54.4 1.8e-06
NP_001333073 (OMIM: 604807) leucine-rich repeat tr ( 660) 324 54.4 1.8e-06
XP_016876618 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 324 54.4 1.8e-06
XP_016876623 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 324 54.4 1.8e-06
NP_001333074 (OMIM: 604807) leucine-rich repeat tr ( 660) 324 54.4 1.8e-06
XP_016876620 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 324 54.4 1.8e-06
XP_011534913 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 324 54.4 1.8e-06
NP_037363 (OMIM: 604807) leucine-rich repeat trans ( 660) 324 54.4 1.8e-06
XP_016876621 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 324 54.4 1.8e-06
XP_005267547 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 324 54.4 1.8e-06
NP_001333075 (OMIM: 604807) leucine-rich repeat tr ( 660) 324 54.4 1.8e-06
XP_016876624 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 324 54.4 1.8e-06
NP_001073982 (OMIM: 603104) carboxypeptidase N sub ( 545) 321 53.9 2e-06
NP_001278917 (OMIM: 603104) carboxypeptidase N sub ( 545) 321 53.9 2e-06
XP_005269337 (OMIM: 603104) PREDICTED: carboxypept ( 545) 321 53.9 2e-06
NP_001333104 (OMIM: 612811) leucine-rich repeat an ( 466) 315 53.1 3.1e-06
NP_001317035 (OMIM: 612811) leucine-rich repeat an ( 466) 315 53.1 3.1e-06
XP_016863657 (OMIM: 615004,615058) PREDICTED: leuc ( 197) 307 51.8 3.3e-06
NP_689660 (OMIM: 612811) leucine-rich repeat and f ( 719) 315 53.2 4.3e-06
>>XP_011520143 (OMIM: 614179) PREDICTED: immunoglobulin (745 aa)
initn: 5053 init1: 5053 opt: 5053 Z-score: 3505.4 bits: 659.3 E(85289): 1.6e-188
Smith-Waterman score: 5053; 100.0% identity (100.0% similar) in 745 aa overlap (1-745:1-745)
10 20 30 40 50 60
pF1KSD MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD GGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACSLVESQSKANQEEFEAGSEYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACSLVESQSKANQEEFEAGSEYS
670 680 690 700 710 720
730 740
pF1KSD DRLPLGAEAVNIAQEINGNYRQTAG
:::::::::::::::::::::::::
XP_011 DRLPLGAEAVNIAQEINGNYRQTAG
730 740
>>NP_001123610 (OMIM: 614179) immunoglobulin superfamily (745 aa)
initn: 5053 init1: 5053 opt: 5053 Z-score: 3505.4 bits: 659.3 E(85289): 1.6e-188
Smith-Waterman score: 5053; 100.0% identity (100.0% similar) in 745 aa overlap (1-745:1-745)
10 20 30 40 50 60
pF1KSD MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD GGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACSLVESQSKANQEEFEAGSEYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACSLVESQSKANQEEFEAGSEYS
670 680 690 700 710 720
730 740
pF1KSD DRLPLGAEAVNIAQEINGNYRQTAG
:::::::::::::::::::::::::
NP_001 DRLPLGAEAVNIAQEINGNYRQTAG
730 740
>>NP_065902 (OMIM: 614179) immunoglobulin superfamily co (745 aa)
initn: 5053 init1: 5053 opt: 5053 Z-score: 3505.4 bits: 659.3 E(85289): 1.6e-188
Smith-Waterman score: 5053; 100.0% identity (100.0% similar) in 745 aa overlap (1-745:1-745)
10 20 30 40 50 60
pF1KSD MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD GGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACSLVESQSKANQEEFEAGSEYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 GGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACSLVESQSKANQEEFEAGSEYS
670 680 690 700 710 720
730 740
pF1KSD DRLPLGAEAVNIAQEINGNYRQTAG
:::::::::::::::::::::::::
NP_065 DRLPLGAEAVNIAQEINGNYRQTAG
730 740
>>NP_001123608 (OMIM: 614179) immunoglobulin superfamily (745 aa)
initn: 5053 init1: 5053 opt: 5053 Z-score: 3505.4 bits: 659.3 E(85289): 1.6e-188
Smith-Waterman score: 5053; 100.0% identity (100.0% similar) in 745 aa overlap (1-745:1-745)
10 20 30 40 50 60
pF1KSD MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD GGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACSLVESQSKANQEEFEAGSEYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACSLVESQSKANQEEFEAGSEYS
670 680 690 700 710 720
730 740
pF1KSD DRLPLGAEAVNIAQEINGNYRQTAG
:::::::::::::::::::::::::
NP_001 DRLPLGAEAVNIAQEINGNYRQTAG
730 740
>>NP_001123609 (OMIM: 614179) immunoglobulin superfamily (745 aa)
initn: 5053 init1: 5053 opt: 5053 Z-score: 3505.4 bits: 659.3 E(85289): 1.6e-188
Smith-Waterman score: 5053; 100.0% identity (100.0% similar) in 745 aa overlap (1-745:1-745)
10 20 30 40 50 60
pF1KSD MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD GGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACSLVESQSKANQEEFEAGSEYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACSLVESQSKANQEEFEAGSEYS
670 680 690 700 710 720
730 740
pF1KSD DRLPLGAEAVNIAQEINGNYRQTAG
:::::::::::::::::::::::::
NP_001 DRLPLGAEAVNIAQEINGNYRQTAG
730 740
>>XP_011520142 (OMIM: 614179) PREDICTED: immunoglobulin (745 aa)
initn: 5053 init1: 5053 opt: 5053 Z-score: 3505.4 bits: 659.3 E(85289): 1.6e-188
Smith-Waterman score: 5053; 100.0% identity (100.0% similar) in 745 aa overlap (1-745:1-745)
10 20 30 40 50 60
pF1KSD MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD GGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACSLVESQSKANQEEFEAGSEYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACSLVESQSKANQEEFEAGSEYS
670 680 690 700 710 720
730 740
pF1KSD DRLPLGAEAVNIAQEINGNYRQTAG
:::::::::::::::::::::::::
XP_011 DRLPLGAEAVNIAQEINGNYRQTAG
730 740
>>XP_016877935 (OMIM: 614179) PREDICTED: immunoglobulin (468 aa)
initn: 3415 init1: 3176 opt: 3176 Z-score: 2210.7 bits: 419.0 E(85289): 2.1e-116
Smith-Waterman score: 3176; 99.8% identity (100.0% similar) in 467 aa overlap (1-467:1-467)
10 20 30 40 50 60
pF1KSD MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHNE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELK
::::::::::::::::::::::::::::::::::::::::::::::.
XP_016 GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRHY
430 440 450 460
490 500 510 520 530 540
pF1KSD PHVFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAA
>>NP_005536 (OMIM: 602059) immunoglobulin superfamily co (428 aa)
initn: 1284 init1: 1000 opt: 1160 Z-score: 817.6 bits: 161.1 E(85289): 8.4e-39
Smith-Waterman score: 1315; 49.8% identity (69.6% similar) in 448 aa overlap (1-442:1-403)
10 20 30 40 50
pF1KSD MFPLRALWLVWALL-GVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLS
: :. :: :::: :.: .::::: : .::. :.:::::..:. :: :.::::::::::
NP_005 MQELHLLW--WALLLGLAQACPEPCDCGEKYGFQIADCAYRDLESVPPGFPANVTTLSLS
10 20 30 40 50
60 70 80 90 100 110
pF1KSD ANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDL
::.. : .::: .: . ::::::::.::: :::: ::.::.::::::.::.: ::::
NP_005 ANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD RNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLY
.::::::::::. :.: .::::. .: ::::..:.:::.::: ::: :.::::::.
NP_005 HNLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFTPLTALSHLQIN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD HNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSA
.::: : ::.:::..:: .: ::.:: :.:::.:: .:.:.:. ::: :::. :::.::
NP_005 ENPFDCTCGIVWLKTWALTTAVSIPEQDNIACTSPHVLKGTPLSRLPPLPCSAPSVQLSY
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD EPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEE
.: . :. :: :....::: .::.:.:.:.:..:::.: : . : .::.
NP_005 QPSQD--GAELRPGFVLALHCDVDGQPAPQLHWHIQIPSGIVEITSP-------NVGT--
240 250 260 270 280
300 310 320 330 340 350
pF1KSD GEGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHN
:: : :. :. . ::: :.::::::.: .. : :.:.: : :
NP_005 -----DGRAL-----------PGTPVASSQPRFQAFANGSLLIPDFGKLEEGTYSCLATN
290 300 310 320 330
360 370 380 390 400 410
pF1KSD ELGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRG-----NSVLPSKPE
:::. .:. ::.:. :: ::: : . . :.. .:.: : : :: ::
NP_005 ELGSAESSVDVALAT-------PGEGGE-DTLGRRFHGKAV-EGKGCYTVDNEVQPSGPE
340 350 360 370 380
420 430 440 450 460 470
pF1KSD GKIKGQGLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFN
.. : : .:: ..::
NP_005 DNV-------VIIYLSRAGNPEAAVAEGVPGQLPPGLLLLGQSLLLFFFLTSF
390 400 410 420
>>NP_958934 (OMIM: 602059) immunoglobulin superfamily co (428 aa)
initn: 1284 init1: 1000 opt: 1160 Z-score: 817.6 bits: 161.1 E(85289): 8.4e-39
Smith-Waterman score: 1315; 49.8% identity (69.6% similar) in 448 aa overlap (1-442:1-403)
10 20 30 40 50
pF1KSD MFPLRALWLVWALL-GVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLS
: :. :: :::: :.: .::::: : .::. :.:::::..:. :: :.::::::::::
NP_958 MQELHLLW--WALLLGLAQACPEPCDCGEKYGFQIADCAYRDLESVPPGFPANVTTLSLS
10 20 30 40 50
60 70 80 90 100 110
pF1KSD ANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDL
::.. : .::: .: . ::::::::.::: :::: ::.::.::::::.::.: ::::
NP_958 ANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD RNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLY
.::::::::::. :.: .::::. .: ::::..:.:::.::: ::: :.::::::.
NP_958 HNLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFTPLTALSHLQIN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD HNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSA
.::: : ::.:::..:: .: ::.:: :.:::.:: .:.:.:. ::: :::. :::.::
NP_958 ENPFDCTCGIVWLKTWALTTAVSIPEQDNIACTSPHVLKGTPLSRLPPLPCSAPSVQLSY
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD EPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEE
.: . :. :: :....::: .::.:.:.:.:..:::.: : . : .::.
NP_958 QPSQD--GAELRPGFVLALHCDVDGQPAPQLHWHIQIPSGIVEITSP-------NVGT--
240 250 260 270 280
300 310 320 330 340 350
pF1KSD GEGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCRAHN
:: : :. :. . ::: :.::::::.: .. : :.:.: : :
NP_958 -----DGRAL-----------PGTPVASSQPRFQAFANGSLLIPDFGKLEEGTYSCLATN
290 300 310 320 330
360 370 380 390 400 410
pF1KSD ELGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRG-----NSVLPSKPE
:::. .:. ::.:. :: ::: : . . :.. .:.: : : :: ::
NP_958 ELGSAESSVDVALAT-------PGEGGE-DTLGRRFHGKAV-EGKGCYTVDNEVQPSGPE
340 350 360 370 380
420 430 440 450 460 470
pF1KSD GKIKGQGLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFN
.. : : .:: ..::
NP_958 DNV-------VIIYLSRAGNPEAAVAEGVPGQLPPGLLLLGQSLLLFFFLTSF
390 400 410 420
>>NP_001013675 (OMIM: 613505) leucine-rich repeat-contai (334 aa)
initn: 365 init1: 334 opt: 400 Z-score: 293.7 bits: 63.8 E(85289): 1.3e-09
Smith-Waterman score: 400; 35.7% identity (57.6% similar) in 238 aa overlap (8-233:22-256)
10 20 30
pF1KSD MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC
: ::: .....: ::: :.:: .:.:
NP_001 MRGPSWSRPRPLLLLLLLLSPWPVWAQVSATASPSGSLGAPDCPEVCTCVP---GGLASC
10 20 30 40 50
40 50 60 70 80 90
pF1KSD AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV
. : :: :: . .: :. :.. .: :::: . . : : .: ...:. :.
NP_001 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG
60 70 80 90 100 110
100 110 120 130 140 150
pF1KSD LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN
:. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...:
NP_001 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN
120 130 140 150 160 170
160 170 180 190 200 210
pF1KSD RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL
.: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : :
NP_001 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL
180 190 200 210 220 230
220 230 240 250 260 270
pF1KSD QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL
:. . :. :: :
NP_001 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL
240 250 260 270 280 290
745 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 06:23:45 2016 done: Thu Nov 3 06:23:47 2016
Total Scan time: 11.650 Total Display time: 0.180
Function used was FASTA [36.3.4 Apr, 2011]