Result of FASTA (omim) for
pF1KSDA1363
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1363, 408 aa
1>>>pF1KSDA1363 408 - 408 aa - 408 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9990+/-0.000405; mu= 18.3871+/- 0.025
mean_var=61.0105+/-12.539, 0's: 0 Z-trim(111.8): 64 B-trim: 310 in 2/49
Lambda= 0.164200
statistics sampled from 20425 (20488) to 20425 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.611), E-opt: 0.2 (0.24), width: 16
Scan time: 8.170
The best scores are: opt bits E(85289)
NP_065843 (OMIM: 613234) neutral cholesterol ester ( 440) 2695 647.2 2.3e-185
NP_001139748 (OMIM: 613234) neutral cholesterol es ( 448) 2664 639.9 3.8e-183
NP_001139750 (OMIM: 613234) neutral cholesterol es ( 275) 1817 439.1 6.3e-123
NP_001139749 (OMIM: 613234) neutral cholesterol es ( 275) 1817 439.1 6.3e-123
NP_001077 (OMIM: 600338) arylacetamide deacetylase ( 399) 1132 276.9 6.1e-74
XP_005247161 (OMIM: 600338) PREDICTED: arylacetami ( 382) 1000 245.6 1.5e-64
XP_005258997 (OMIM: 151750,615980) PREDICTED: horm ( 775) 165 48.0 9.5e-05
XP_006723281 (OMIM: 151750,615980) PREDICTED: horm ( 775) 165 48.0 9.5e-05
XP_016882299 (OMIM: 151750,615980) PREDICTED: horm ( 775) 165 48.0 9.5e-05
XP_005258995 (OMIM: 151750,615980) PREDICTED: horm ( 821) 165 48.0 0.0001
XP_005258996 (OMIM: 151750,615980) PREDICTED: horm ( 838) 165 48.0 0.0001
XP_005258994 (OMIM: 151750,615980) PREDICTED: horm (1000) 165 48.1 0.00012
NP_005348 (OMIM: 151750,615980) hormone-sensitive (1076) 165 48.1 0.00012
>>NP_065843 (OMIM: 613234) neutral cholesterol ester hyd (440 aa)
initn: 2695 init1: 2695 opt: 2695 Z-score: 3448.9 bits: 647.2 E(85289): 2.3e-185
Smith-Waterman score: 2695; 99.8% identity (100.0% similar) in 408 aa overlap (1-408:33-440)
10 20 30
pF1KSD MRSSCVLLTALVALATYYVYIPLPGSVSDP
:::::::::::::::.::::::::::::::
NP_065 SCRGQKVAGGLRVVSPFPLCQPAGEPSQGKMRSSCVLLTALVALAAYYVYIPLPGSVSDP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KSD WKLMLLDATFRGAQQVSNLIHYLGLSHHLLALNFIIVSFGKKSAWSSAQVKVTDTDFDGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 WKLMLLDATFRGAQQVSNLIHYLGLSHHLLALNFIIVSFGKKSAWSSAQVKVTDTDFDGV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KSD EVRVFEGPPKPEEPLKRSVVYIHGGGWALASAKIRYYDELCTAMAEELNAVIVSIEYRLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EVRVFEGPPKPEEPLKRSVVYIHGGGWALASAKIRYYDELCTAMAEELNAVIVSIEYRLV
130 140 150 160 170 180
160 170 180 190 200 210
pF1KSD PKVYFPEQIHDVVRATKYFLKPEVLQKYMVDPGRICISGDSAGGNLAAALGQQFTQDASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 PKVYFPEQIHDVVRATKYFLKPEVLQKYMVDPGRICISGDSAGGNLAAALGQQFTQDASL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KSD KNKLKLQALIYPVLQALDFNTPSYQQNVNTPILPRYVMVKYWVDYFKGNYDFVQAMIVNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 KNKLKLQALIYPVLQALDFNTPSYQQNVNTPILPRYVMVKYWVDYFKGNYDFVQAMIVNN
250 260 270 280 290 300
280 290 300 310 320 330
pF1KSD HTSLDVEEAAAVRARLNWTSLLPASFTKNYKPVVQTTGNARIVQELPQLLDARSAPLIAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 HTSLDVEEAAAVRARLNWTSLLPASFTKNYKPVVQTTGNARIVQELPQLLDARSAPLIAD
310 320 330 340 350 360
340 350 360 370 380 390
pF1KSD QAVLQLLPKTYILTCEHDVLRDDGIMYAKRLESAGVEVTLDHFEDGFHGCMIFTSWPTNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 QAVLQLLPKTYILTCEHDVLRDDGIMYAKRLESAGVEVTLDHFEDGFHGCMIFTSWPTNF
370 380 390 400 410 420
400
pF1KSD SVGIRTRNSYIKWLDQNL
::::::::::::::::::
NP_065 SVGIRTRNSYIKWLDQNL
430 440
>>NP_001139748 (OMIM: 613234) neutral cholesterol ester (448 aa)
initn: 1891 init1: 1891 opt: 2664 Z-score: 3409.1 bits: 639.9 E(85289): 3.8e-183
Smith-Waterman score: 2664; 97.6% identity (98.1% similar) in 416 aa overlap (1-408:33-448)
10 20 30
pF1KSD MRSSCVLLTALVALATYYVYIPLPGSVSDP
:::::::::::::::.::::::::::::::
NP_001 SCRGQKVAGGLRVVSPFPLCQPAGEPSQGKMRSSCVLLTALVALAAYYVYIPLPGSVSDP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KSD WKLMLLDATFRGAQQVSNLIHYLGLSHHLLALNFIIVSFGKKSAWSSAQVKVTDTDFDGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WKLMLLDATFRGAQQVSNLIHYLGLSHHLLALNFIIVSFGKKSAWSSAQVKVTDTDFDGV
70 80 90 100 110 120
100 110 120 130 140
pF1KSD EVRVFEGPPKPEEPLKRSVVYIHGGGWALASA--------KIRYYDELCTAMAEELNAVI
:::::::::::::::::::::::::::::::: .:::::::::::::::::::
NP_001 EVRVFEGPPKPEEPLKRSVVYIHGGGWALASASASWSPSDEIRYYDELCTAMAEELNAVI
130 140 150 160 170 180
150 160 170 180 190 200
pF1KSD VSIEYRLVPKVYFPEQIHDVVRATKYFLKPEVLQKYMVDPGRICISGDSAGGNLAAALGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSIEYRLVPKVYFPEQIHDVVRATKYFLKPEVLQKYMVDPGRICISGDSAGGNLAAALGQ
190 200 210 220 230 240
210 220 230 240 250 260
pF1KSD QFTQDASLKNKLKLQALIYPVLQALDFNTPSYQQNVNTPILPRYVMVKYWVDYFKGNYDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QFTQDASLKNKLKLQALIYPVLQALDFNTPSYQQNVNTPILPRYVMVKYWVDYFKGNYDF
250 260 270 280 290 300
270 280 290 300 310 320
pF1KSD VQAMIVNNHTSLDVEEAAAVRARLNWTSLLPASFTKNYKPVVQTTGNARIVQELPQLLDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQAMIVNNHTSLDVEEAAAVRARLNWTSLLPASFTKNYKPVVQTTGNARIVQELPQLLDA
310 320 330 340 350 360
330 340 350 360 370 380
pF1KSD RSAPLIADQAVLQLLPKTYILTCEHDVLRDDGIMYAKRLESAGVEVTLDHFEDGFHGCMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSAPLIADQAVLQLLPKTYILTCEHDVLRDDGIMYAKRLESAGVEVTLDHFEDGFHGCMI
370 380 390 400 410 420
390 400
pF1KSD FTSWPTNFSVGIRTRNSYIKWLDQNL
::::::::::::::::::::::::::
NP_001 FTSWPTNFSVGIRTRNSYIKWLDQNL
430 440
>>NP_001139750 (OMIM: 613234) neutral cholesterol ester (275 aa)
initn: 1817 init1: 1817 opt: 1817 Z-score: 2327.9 bits: 439.1 E(85289): 6.3e-123
Smith-Waterman score: 1817; 100.0% identity (100.0% similar) in 275 aa overlap (134-408:1-275)
110 120 130 140 150 160
pF1KSD PLKRSVVYIHGGGWALASAKIRYYDELCTAMAEELNAVIVSIEYRLVPKVYFPEQIHDVV
::::::::::::::::::::::::::::::
NP_001 MAEELNAVIVSIEYRLVPKVYFPEQIHDVV
10 20 30
170 180 190 200 210 220
pF1KSD RATKYFLKPEVLQKYMVDPGRICISGDSAGGNLAAALGQQFTQDASLKNKLKLQALIYPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RATKYFLKPEVLQKYMVDPGRICISGDSAGGNLAAALGQQFTQDASLKNKLKLQALIYPV
40 50 60 70 80 90
230 240 250 260 270 280
pF1KSD LQALDFNTPSYQQNVNTPILPRYVMVKYWVDYFKGNYDFVQAMIVNNHTSLDVEEAAAVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQALDFNTPSYQQNVNTPILPRYVMVKYWVDYFKGNYDFVQAMIVNNHTSLDVEEAAAVR
100 110 120 130 140 150
290 300 310 320 330 340
pF1KSD ARLNWTSLLPASFTKNYKPVVQTTGNARIVQELPQLLDARSAPLIADQAVLQLLPKTYIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARLNWTSLLPASFTKNYKPVVQTTGNARIVQELPQLLDARSAPLIADQAVLQLLPKTYIL
160 170 180 190 200 210
350 360 370 380 390 400
pF1KSD TCEHDVLRDDGIMYAKRLESAGVEVTLDHFEDGFHGCMIFTSWPTNFSVGIRTRNSYIKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TCEHDVLRDDGIMYAKRLESAGVEVTLDHFEDGFHGCMIFTSWPTNFSVGIRTRNSYIKW
220 230 240 250 260 270
pF1KSD LDQNL
:::::
NP_001 LDQNL
>>NP_001139749 (OMIM: 613234) neutral cholesterol ester (275 aa)
initn: 1817 init1: 1817 opt: 1817 Z-score: 2327.9 bits: 439.1 E(85289): 6.3e-123
Smith-Waterman score: 1817; 100.0% identity (100.0% similar) in 275 aa overlap (134-408:1-275)
110 120 130 140 150 160
pF1KSD PLKRSVVYIHGGGWALASAKIRYYDELCTAMAEELNAVIVSIEYRLVPKVYFPEQIHDVV
::::::::::::::::::::::::::::::
NP_001 MAEELNAVIVSIEYRLVPKVYFPEQIHDVV
10 20 30
170 180 190 200 210 220
pF1KSD RATKYFLKPEVLQKYMVDPGRICISGDSAGGNLAAALGQQFTQDASLKNKLKLQALIYPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RATKYFLKPEVLQKYMVDPGRICISGDSAGGNLAAALGQQFTQDASLKNKLKLQALIYPV
40 50 60 70 80 90
230 240 250 260 270 280
pF1KSD LQALDFNTPSYQQNVNTPILPRYVMVKYWVDYFKGNYDFVQAMIVNNHTSLDVEEAAAVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQALDFNTPSYQQNVNTPILPRYVMVKYWVDYFKGNYDFVQAMIVNNHTSLDVEEAAAVR
100 110 120 130 140 150
290 300 310 320 330 340
pF1KSD ARLNWTSLLPASFTKNYKPVVQTTGNARIVQELPQLLDARSAPLIADQAVLQLLPKTYIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARLNWTSLLPASFTKNYKPVVQTTGNARIVQELPQLLDARSAPLIADQAVLQLLPKTYIL
160 170 180 190 200 210
350 360 370 380 390 400
pF1KSD TCEHDVLRDDGIMYAKRLESAGVEVTLDHFEDGFHGCMIFTSWPTNFSVGIRTRNSYIKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TCEHDVLRDDGIMYAKRLESAGVEVTLDHFEDGFHGCMIFTSWPTNFSVGIRTRNSYIKW
220 230 240 250 260 270
pF1KSD LDQNL
:::::
NP_001 LDQNL
>>NP_001077 (OMIM: 600338) arylacetamide deacetylase [Ho (399 aa)
initn: 1049 init1: 552 opt: 1132 Z-score: 1448.5 bits: 276.9 E(85289): 6.1e-74
Smith-Waterman score: 1132; 43.2% identity (72.5% similar) in 407 aa overlap (2-408:3-399)
10 20 30 40 50
pF1KSD MRSSCVLLTALVALATYYVYIPLPGSVSDPWKLMLLDATFRGAQQVSNLIHYLGLSHHL
:.: :: . . .: ::.: ::: .: .::..: ..: .. :....... ::: ::.
NP_001 MGRKSLYLLIVGILIA-YYIYTPLPDNVEEPWRMMWINAHLKTIQNLATFVELLGL-HHF
10 20 30 40 50
60 70 80 90 100 110
pF1KSD LALNFIIVSFGKKSAWSSAQVKVTDTDFDGVEVRVFEGPPKPEEPLKRSVVYIHGGGWAL
. .. :: . :. .: ::.: :... :::. : . : :.:.. ::::::: .
NP_001 MDSFKVVGSFDEVPPTSDENVTVTETKFNNILVRVYV-PKRKSEALRRGLFYIHGGGWCV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD ASAKIRYYDELCTAMAEELNAVIVSIEYRLVPKVYFPEQIHDVVRATKYFLKPEVLQKYM
.:: . :: : :..:.::.:: .:::.:: .:: :..:: : ..::. .:: ::
NP_001 GSAALSGYDLLSRWTADRLDAVVVSTNYRLAPKYHFPIQFEDVYNALRWFLRKKVLAKYG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD VDPGRICISGDSAGGNLAAALGQQFTQDASLKNKLKLQALIYPVLQALDFNTPSYQQNVN
:.: :: :::::::::::::. ::. .: ..: :::.:.::::.:: :: . ::::.: :
NP_001 VNPERIGISGDSAGGNLAAAVTQQLLDDPDVKIKLKIQSLIYPALQPLDVDLPSYQENSN
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD TPILPRYVMVKYWVDYFKGNYDFVQAMIVNNHTSLDVEEAAAVRARLNWTSLLPASFTKN
.: . .::..: .:: . .. .::. .:. . :.. . .::.:::: : :.
NP_001 FLFLSKSLMVRFWSEYFTTDRSLEKAMLSRQHVPV---ESSHLFKFVNWSSLLPERFIKG
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD YKPVVQTTGNARIVQELPQLLDARSAPLIADQAVLQLLPKTYILTCEHDVLRDDGIMYAK
. . :....... : .::.:.:::.::. :. :: ::..::..:.:::::.::.
NP_001 HVYNNPNYGSSELAKKYPGFLDVRAAPLLADDNKLRGLPLTYVITCQYDLLRDDGLMYVT
300 310 320 330 340 350
360 370 380 390 400
pF1KSD RLESAGVEVTLDHFEDGFHGCMIFTSWPTNFSVGIRTRNSYIKWLDQNL
::...::.:: .: :::::: . : ..... : :.::.:: .::
NP_001 RLRNTGVQVTHNHVEDGFHGAFSFL----GLKISHRLINQYIEWLKENL
360 370 380 390
>>XP_005247161 (OMIM: 600338) PREDICTED: arylacetamide d (382 aa)
initn: 1010 init1: 552 opt: 1000 Z-score: 1279.8 bits: 245.6 E(85289): 1.5e-64
Smith-Waterman score: 1071; 42.3% identity (69.5% similar) in 407 aa overlap (2-408:3-382)
10 20 30 40 50
pF1KSD MRSSCVLLTALVALATYYVYIPLPGSVSDPWKLMLLDATFRGAQQVSNLIHYLGLSHHL
:.: :: . . .: ::.: ::: .: .::..: ..: .. :
XP_005 MGRKSLYLLIVGILIA-YYIYTPLPDNVEEPWRMMWINAHLKTIQ---------------
10 20 30 40
60 70 80 90 100 110
pF1KSD LALNFIIVSFGKKSAWSSAQVKVTDTDFDGVEVRVFEGPPKPEEPLKRSVVYIHGGGWAL
:... :: . :. .: ::.: :... :::. : . : :.:.. ::::::: .
XP_005 ---NLVVGSFDEVPPTSDENVTVTETKFNNILVRVYV-PKRKSEALRRGLFYIHGGGWCV
50 60 70 80 90 100
120 130 140 150 160 170
pF1KSD ASAKIRYYDELCTAMAEELNAVIVSIEYRLVPKVYFPEQIHDVVRATKYFLKPEVLQKYM
.:: . :: : :..:.::.:: .:::.:: .:: :..:: : ..::. .:: ::
XP_005 GSAALSGYDLLSRWTADRLDAVVVSTNYRLAPKYHFPIQFEDVYNALRWFLRKKVLAKYG
110 120 130 140 150 160
180 190 200 210 220 230
pF1KSD VDPGRICISGDSAGGNLAAALGQQFTQDASLKNKLKLQALIYPVLQALDFNTPSYQQNVN
:.: :: :::::::::::::. ::. .: ..: :::.:.::::.:: :: . ::::.: :
XP_005 VNPERIGISGDSAGGNLAAAVTQQLLDDPDVKIKLKIQSLIYPALQPLDVDLPSYQENSN
170 180 190 200 210 220
240 250 260 270 280 290
pF1KSD TPILPRYVMVKYWVDYFKGNYDFVQAMIVNNHTSLDVEEAAAVRARLNWTSLLPASFTKN
.: . .::..: .:: . .. .::. .:. . :.. . .::.:::: : :.
XP_005 FLFLSKSLMVRFWSEYFTTDRSLEKAMLSRQHVPV---ESSHLFKFVNWSSLLPERFIKG
230 240 250 260 270
300 310 320 330 340 350
pF1KSD YKPVVQTTGNARIVQELPQLLDARSAPLIADQAVLQLLPKTYILTCEHDVLRDDGIMYAK
. . :....... : .::.:.:::.::. :. :: ::..::..:.:::::.::.
XP_005 HVYNNPNYGSSELAKKYPGFLDVRAAPLLADDNKLRGLPLTYVITCQYDLLRDDGLMYVT
280 290 300 310 320 330
360 370 380 390 400
pF1KSD RLESAGVEVTLDHFEDGFHGCMIFTSWPTNFSVGIRTRNSYIKWLDQNL
::...::.:: .: :::::: . : ..... : :.::.:: .::
XP_005 RLRNTGVQVTHNHVEDGFHGAFSFL----GLKISHRLINQYIEWLKENL
340 350 360 370 380
>>XP_005258997 (OMIM: 151750,615980) PREDICTED: hormone- (775 aa)
initn: 331 init1: 146 opt: 165 Z-score: 206.2 bits: 48.0 E(85289): 9.5e-05
Smith-Waterman score: 226; 31.1% identity (62.1% similar) in 161 aa overlap (93-250:328-481)
70 80 90 100 110 120
pF1KSD NFIIVSFGKKSAWSSAQVKVTDTDFDGVEVRVFEGPPKPEE-PLKRS-VVYIHGGGWALA
: .: :.:.. : .:: .:..::::..
XP_005 GPVLVRLISYDLREGQDSEELSSLIKSNGQRSLELWPRPQQAPRSRSLIVHFHGGGFVAQ
300 310 320 330 340 350
130 140 150 160 170 180
pF1KSD SAKIRYYDELCTAMAEELNAVIVSIEYRLVPKVYFPEQIHDVVRATKYFLKPEVLQKYMV
.. : .. . :.::.: :.::.: :.:.. ::. ... : . .: .: .
XP_005 TS--RSHEPYLKSWAQELGAPIISIDYSLAPEAPFPRALEECFFAYCWAIKHCAL---LG
360 370 380 390 400 410
190 200 210 220 230
pF1KSD DPG-RICISGDSAGGNLAAALGQQFTQDASLKNKLKLQALIYPVLQALDFNTPSYQQNVN
. : :::..:::::::: ... . . ... ..: ::. . .:: ..
XP_005 STGERICLAGDSAGGNLCFTVALR-AAAYGVRVPDGIMA-AYPATMLQPAASPSRLLSLM
420 430 440 450 460 470
240 250 260 270 280 290
pF1KSD TPILPRYVMVKYWVDYFKGNYDFVQAMIVNNHTSLDVEEAAAVRARLNWTSLLPASFTKN
:.:: :. :
XP_005 DPLLPLSVLSKCVSAYAGAKTEDHSNSDQKALGMMGLVRRDTALLLRDFRLGASSWLNSF
480 490 500 510 520 530
>--
initn: 206 init1: 146 opt: 165 Z-score: 206.2 bits: 48.0 E(85289): 9.5e-05
Smith-Waterman score: 165; 30.1% identity (65.6% similar) in 93 aa overlap (294-385:638-730)
270 280 290 300 310 320
pF1KSD QAMIVNNHTSLDVEEAAAVRARLNWTSLLPASFTKNYKPVVQTTGNARI-VQELPQLLDA
:.: ....: .. : ... . : . .
XP_005 VNFLLPPEDAGEEAEAKNELSPMDRGLGVRAAFPEGFHPRRSSQGATQMPLYSSPIVKNP
610 620 630 640 650 660
330 340 350 360 370 380
pF1KSD RSAPLIADQAVLQLLPKTYILTCEHDVLRDDGIMYAKRLESAGVEVTLDHFEDGFHGCMI
.::.: ...:. :: ..:..: : . ::..: :.::.. : ::: :: :: .
XP_005 FMSPLLAPDSMLKSLPPVHIVACALDPMLDDSVMLARRLRNLGQPVTLRVVEDLPHGFLT
670 680 690 700 710 720
390 400
pF1KSD FTSWPTNFSVGIRTRNSYIKWLDQNL
...
XP_005 LAALCRETRQAAELCVERIRLVLTPPAGAGPSGETGAAGVDGGCGGRH
730 740 750 760 770
>>XP_006723281 (OMIM: 151750,615980) PREDICTED: hormone- (775 aa)
initn: 331 init1: 146 opt: 165 Z-score: 206.2 bits: 48.0 E(85289): 9.5e-05
Smith-Waterman score: 226; 31.1% identity (62.1% similar) in 161 aa overlap (93-250:328-481)
70 80 90 100 110 120
pF1KSD NFIIVSFGKKSAWSSAQVKVTDTDFDGVEVRVFEGPPKPEE-PLKRS-VVYIHGGGWALA
: .: :.:.. : .:: .:..::::..
XP_006 GPVLVRLISYDLREGQDSEELSSLIKSNGQRSLELWPRPQQAPRSRSLIVHFHGGGFVAQ
300 310 320 330 340 350
130 140 150 160 170 180
pF1KSD SAKIRYYDELCTAMAEELNAVIVSIEYRLVPKVYFPEQIHDVVRATKYFLKPEVLQKYMV
.. : .. . :.::.: :.::.: :.:.. ::. ... : . .: .: .
XP_006 TS--RSHEPYLKSWAQELGAPIISIDYSLAPEAPFPRALEECFFAYCWAIKHCAL---LG
360 370 380 390 400 410
190 200 210 220 230
pF1KSD DPG-RICISGDSAGGNLAAALGQQFTQDASLKNKLKLQALIYPVLQALDFNTPSYQQNVN
. : :::..:::::::: ... . . ... ..: ::. . .:: ..
XP_006 STGERICLAGDSAGGNLCFTVALR-AAAYGVRVPDGIMA-AYPATMLQPAASPSRLLSLM
420 430 440 450 460 470
240 250 260 270 280 290
pF1KSD TPILPRYVMVKYWVDYFKGNYDFVQAMIVNNHTSLDVEEAAAVRARLNWTSLLPASFTKN
:.:: :. :
XP_006 DPLLPLSVLSKCVSAYAGAKTEDHSNSDQKALGMMGLVRRDTALLLRDFRLGASSWLNSF
480 490 500 510 520 530
>--
initn: 206 init1: 146 opt: 165 Z-score: 206.2 bits: 48.0 E(85289): 9.5e-05
Smith-Waterman score: 165; 30.1% identity (65.6% similar) in 93 aa overlap (294-385:638-730)
270 280 290 300 310 320
pF1KSD QAMIVNNHTSLDVEEAAAVRARLNWTSLLPASFTKNYKPVVQTTGNARI-VQELPQLLDA
:.: ....: .. : ... . : . .
XP_006 VNFLLPPEDAGEEAEAKNELSPMDRGLGVRAAFPEGFHPRRSSQGATQMPLYSSPIVKNP
610 620 630 640 650 660
330 340 350 360 370 380
pF1KSD RSAPLIADQAVLQLLPKTYILTCEHDVLRDDGIMYAKRLESAGVEVTLDHFEDGFHGCMI
.::.: ...:. :: ..:..: : . ::..: :.::.. : ::: :: :: .
XP_006 FMSPLLAPDSMLKSLPPVHIVACALDPMLDDSVMLARRLRNLGQPVTLRVVEDLPHGFLT
670 680 690 700 710 720
390 400
pF1KSD FTSWPTNFSVGIRTRNSYIKWLDQNL
...
XP_006 LAALCRETRQAAELCVERIRLVLTPPAGAGPSGETGAAGVDGGCGGRH
730 740 750 760 770
>>XP_016882299 (OMIM: 151750,615980) PREDICTED: hormone- (775 aa)
initn: 331 init1: 146 opt: 165 Z-score: 206.2 bits: 48.0 E(85289): 9.5e-05
Smith-Waterman score: 226; 31.1% identity (62.1% similar) in 161 aa overlap (93-250:328-481)
70 80 90 100 110 120
pF1KSD NFIIVSFGKKSAWSSAQVKVTDTDFDGVEVRVFEGPPKPEE-PLKRS-VVYIHGGGWALA
: .: :.:.. : .:: .:..::::..
XP_016 GPVLVRLISYDLREGQDSEELSSLIKSNGQRSLELWPRPQQAPRSRSLIVHFHGGGFVAQ
300 310 320 330 340 350
130 140 150 160 170 180
pF1KSD SAKIRYYDELCTAMAEELNAVIVSIEYRLVPKVYFPEQIHDVVRATKYFLKPEVLQKYMV
.. : .. . :.::.: :.::.: :.:.. ::. ... : . .: .: .
XP_016 TS--RSHEPYLKSWAQELGAPIISIDYSLAPEAPFPRALEECFFAYCWAIKHCAL---LG
360 370 380 390 400 410
190 200 210 220 230
pF1KSD DPG-RICISGDSAGGNLAAALGQQFTQDASLKNKLKLQALIYPVLQALDFNTPSYQQNVN
. : :::..:::::::: ... . . ... ..: ::. . .:: ..
XP_016 STGERICLAGDSAGGNLCFTVALR-AAAYGVRVPDGIMA-AYPATMLQPAASPSRLLSLM
420 430 440 450 460 470
240 250 260 270 280 290
pF1KSD TPILPRYVMVKYWVDYFKGNYDFVQAMIVNNHTSLDVEEAAAVRARLNWTSLLPASFTKN
:.:: :. :
XP_016 DPLLPLSVLSKCVSAYAGAKTEDHSNSDQKALGMMGLVRRDTALLLRDFRLGASSWLNSF
480 490 500 510 520 530
>--
initn: 206 init1: 146 opt: 165 Z-score: 206.2 bits: 48.0 E(85289): 9.5e-05
Smith-Waterman score: 165; 30.1% identity (65.6% similar) in 93 aa overlap (294-385:638-730)
270 280 290 300 310 320
pF1KSD QAMIVNNHTSLDVEEAAAVRARLNWTSLLPASFTKNYKPVVQTTGNARI-VQELPQLLDA
:.: ....: .. : ... . : . .
XP_016 VNFLLPPEDAGEEAEAKNELSPMDRGLGVRAAFPEGFHPRRSSQGATQMPLYSSPIVKNP
610 620 630 640 650 660
330 340 350 360 370 380
pF1KSD RSAPLIADQAVLQLLPKTYILTCEHDVLRDDGIMYAKRLESAGVEVTLDHFEDGFHGCMI
.::.: ...:. :: ..:..: : . ::..: :.::.. : ::: :: :: .
XP_016 FMSPLLAPDSMLKSLPPVHIVACALDPMLDDSVMLARRLRNLGQPVTLRVVEDLPHGFLT
670 680 690 700 710 720
390 400
pF1KSD FTSWPTNFSVGIRTRNSYIKWLDQNL
...
XP_016 LAALCRETRQAAELCVERIRLVLTPPAGAGPSGETGAAGVDGGCGGRH
730 740 750 760 770
>>XP_005258995 (OMIM: 151750,615980) PREDICTED: hormone- (821 aa)
initn: 307 init1: 146 opt: 165 Z-score: 205.9 bits: 48.0 E(85289): 0.0001
Smith-Waterman score: 226; 31.1% identity (62.1% similar) in 161 aa overlap (93-250:374-527)
70 80 90 100 110 120
pF1KSD NFIIVSFGKKSAWSSAQVKVTDTDFDGVEVRVFEGPPKPEE-PLKRS-VVYIHGGGWALA
: .: :.:.. : .:: .:..::::..
XP_005 GPVLVRLISYDLREGQDSEELSSLIKSNGQRSLELWPRPQQAPRSRSLIVHFHGGGFVAQ
350 360 370 380 390 400
130 140 150 160 170 180
pF1KSD SAKIRYYDELCTAMAEELNAVIVSIEYRLVPKVYFPEQIHDVVRATKYFLKPEVLQKYMV
.. : .. . :.::.: :.::.: :.:.. ::. ... : . .: .: .
XP_005 TS--RSHEPYLKSWAQELGAPIISIDYSLAPEAPFPRALEECFFAYCWAIKHCAL---LG
410 420 430 440 450
190 200 210 220 230
pF1KSD DPG-RICISGDSAGGNLAAALGQQFTQDASLKNKLKLQALIYPVLQALDFNTPSYQQNVN
. : :::..:::::::: ... . . ... ..: ::. . .:: ..
XP_005 STGERICLAGDSAGGNLCFTVALR-AAAYGVRVPDGIMA-AYPATMLQPAASPSRLLSLM
460 470 480 490 500 510
240 250 260 270 280 290
pF1KSD TPILPRYVMVKYWVDYFKGNYDFVQAMIVNNHTSLDVEEAAAVRARLNWTSLLPASFTKN
:.:: :. :
XP_005 DPLLPLSVLSKCVSAYAGAKTEDHSNSDQKALGMMGLVRRDTALLLRDFRLGASSWLNSF
520 530 540 550 560 570
>--
initn: 206 init1: 146 opt: 165 Z-score: 205.9 bits: 48.0 E(85289): 0.0001
Smith-Waterman score: 165; 30.1% identity (65.6% similar) in 93 aa overlap (294-385:684-776)
270 280 290 300 310 320
pF1KSD QAMIVNNHTSLDVEEAAAVRARLNWTSLLPASFTKNYKPVVQTTGNARI-VQELPQLLDA
:.: ....: .. : ... . : . .
XP_005 VNFLLPPEDAGEEAEAKNELSPMDRGLGVRAAFPEGFHPRRSSQGATQMPLYSSPIVKNP
660 670 680 690 700 710
330 340 350 360 370 380
pF1KSD RSAPLIADQAVLQLLPKTYILTCEHDVLRDDGIMYAKRLESAGVEVTLDHFEDGFHGCMI
.::.: ...:. :: ..:..: : . ::..: :.::.. : ::: :: :: .
XP_005 FMSPLLAPDSMLKSLPPVHIVACALDPMLDDSVMLARRLRNLGQPVTLRVVEDLPHGFLT
720 730 740 750 760 770
390 400
pF1KSD FTSWPTNFSVGIRTRNSYIKWLDQNL
...
XP_005 LAALCRETRQAAELCVERIRLVLTPPAGAGPSGETGAAGVDGGCGGRH
780 790 800 810 820
408 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 05:59:39 2016 done: Thu Nov 3 05:59:40 2016
Total Scan time: 8.170 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]