Result of FASTA (omim) for
pF1KSDA1274
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1274, 856 aa
1>>>pF1KSDA1274 856 - 856 aa - 856 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6301+/-0.000358; mu= 19.6859+/- 0.022
mean_var=77.5770+/-15.868, 0's: 0 Z-trim(114.6): 24 B-trim: 858 in 2/55
Lambda= 0.145616
statistics sampled from 24525 (24540) to 24525 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.661), E-opt: 0.2 (0.288), width: 16
Scan time: 12.180
The best scores are: opt bits E(85289)
NP_055246 (OMIM: 614656) paladin [Homo sapiens] ( 856) 5765 1221.1 0
XP_016871561 (OMIM: 614656) PREDICTED: paladin iso ( 856) 5765 1221.1 0
XP_011537940 (OMIM: 614656) PREDICTED: paladin iso ( 856) 5765 1221.1 0
XP_011537939 (OMIM: 614656) PREDICTED: paladin iso ( 856) 5765 1221.1 0
>>NP_055246 (OMIM: 614656) paladin [Homo sapiens] (856 aa)
initn: 5765 init1: 5765 opt: 5765 Z-score: 6539.5 bits: 1221.1 E(85289): 0
Smith-Waterman score: 5765; 99.9% identity (99.9% similar) in 856 aa overlap (1-856:1-856)
10 20 30 40 50 60
pF1KSD MGTTASTAQQTVSAGTPFEGLQGSGTMDSRHSVSIHSFQSTSLHNSKAKSIIPNKVAPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MGTTASTAQQTVSAGTPFEGLQGSGTMDSRHSVSIHSFQSTSLHNSKAKSIIPNKVAPVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ITYNCKEEFQIHDELLKAHYTLGRLSDNTPEHYLVQGRYFLVRDVTEKMDVLGTVGSCGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ITYNCKEEFQIHDELLKAHYTLGRLSDNTPEHYLVQGRYFLVRDVTEKMDVLGTVGSCGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD PNFRQVQGGLTVFGMGQPSLLGFRRVLQKLQKDGHRECVIFCVREEPVLFLRADEDFVSY
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
NP_055 PNFRQVQGGLTVFGMGQPSLSGFRRVLQKLQKDGHRECVIFCVREEPVLFLRADEDFVSY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TPRDKQNLHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTEDLWGEPHAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TPRDKQNLHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTEDLWGEPHAVA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IHGEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVLRETPSLLQLRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 IHGEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVLRETPSLLQLRD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD AHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQPEAAPTQAKPLPMEQFQVIQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 AHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQPEAAPTQAKPLPMEQFQVIQS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FLRMVPQGRRMVEEVDRAITACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FLRMVPQGRRMVEEVDRAITACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ALWSLERYFYLILFNYYLHEQYPLAFALSFSRWLCAHPELYRLPVTLSSAGPVAPRDLIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ALWSLERYFYLILFNYYLHEQYPLAFALSFSRWLCAHPELYRLPVTLSSAGPVAPRDLIA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD RGSLREDDLVSPDALSTVREMDVANFRRVPRMPIYGTAQPSAKALGSILAYLTDAKRRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 RGSLREDDLVSPDALSTVREMDVANFRRVPRMPIYGTAQPSAKALGSILAYLTDAKRRLR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD KVVWVSLREEAVLECDGHTYSLRWPGPPVAPDQLETLEAQLKAHLSEPPPGKEGPLTYRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KVVWVSLREEAVLECDGHTYSLRWPGPPVAPDQLETLEAQLKAHLSEPPPGKEGPLTYRF
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD QTCLTMQEVFSQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QTCLTMQEVFSQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVFS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD CLSGQGRTTTAMVVAVLAFWHIQGFPEVGEEELVSVPDAKFTKGEFQVVMKVVQLLPDGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 CLSGQGRTTTAMVVAVLAFWHIQGFPEVGEEELVSVPDAKFTKGEFQVVMKVVQLLPDGH
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD RVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLRSLQYLERYVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 RVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLRSLQYLERYVC
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD LILFNAYLHLEKADSWQRPFSTWMQEVASKAGIYEILNELGFPELESGEDQPFSRLRYRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LILFNAYLHLEKADSWQRPFSTWMQEVASKAGIYEILNELGFPELESGEDQPFSRLRYRW
790 800 810 820 830 840
850
pF1KSD QEQSCSLEPSAPEDLL
::::::::::::::::
NP_055 QEQSCSLEPSAPEDLL
850
>>XP_016871561 (OMIM: 614656) PREDICTED: paladin isoform (856 aa)
initn: 5765 init1: 5765 opt: 5765 Z-score: 6539.5 bits: 1221.1 E(85289): 0
Smith-Waterman score: 5765; 99.9% identity (99.9% similar) in 856 aa overlap (1-856:1-856)
10 20 30 40 50 60
pF1KSD MGTTASTAQQTVSAGTPFEGLQGSGTMDSRHSVSIHSFQSTSLHNSKAKSIIPNKVAPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGTTASTAQQTVSAGTPFEGLQGSGTMDSRHSVSIHSFQSTSLHNSKAKSIIPNKVAPVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ITYNCKEEFQIHDELLKAHYTLGRLSDNTPEHYLVQGRYFLVRDVTEKMDVLGTVGSCGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ITYNCKEEFQIHDELLKAHYTLGRLSDNTPEHYLVQGRYFLVRDVTEKMDVLGTVGSCGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD PNFRQVQGGLTVFGMGQPSLLGFRRVLQKLQKDGHRECVIFCVREEPVLFLRADEDFVSY
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
XP_016 PNFRQVQGGLTVFGMGQPSLSGFRRVLQKLQKDGHRECVIFCVREEPVLFLRADEDFVSY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TPRDKQNLHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTEDLWGEPHAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPRDKQNLHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTEDLWGEPHAVA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IHGEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVLRETPSLLQLRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IHGEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVLRETPSLLQLRD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD AHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQPEAAPTQAKPLPMEQFQVIQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQPEAAPTQAKPLPMEQFQVIQS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FLRMVPQGRRMVEEVDRAITACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLRMVPQGRRMVEEVDRAITACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ALWSLERYFYLILFNYYLHEQYPLAFALSFSRWLCAHPELYRLPVTLSSAGPVAPRDLIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALWSLERYFYLILFNYYLHEQYPLAFALSFSRWLCAHPELYRLPVTLSSAGPVAPRDLIA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD RGSLREDDLVSPDALSTVREMDVANFRRVPRMPIYGTAQPSAKALGSILAYLTDAKRRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGSLREDDLVSPDALSTVREMDVANFRRVPRMPIYGTAQPSAKALGSILAYLTDAKRRLR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD KVVWVSLREEAVLECDGHTYSLRWPGPPVAPDQLETLEAQLKAHLSEPPPGKEGPLTYRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KVVWVSLREEAVLECDGHTYSLRWPGPPVAPDQLETLEAQLKAHLSEPPPGKEGPLTYRF
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD QTCLTMQEVFSQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QTCLTMQEVFSQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVFS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD CLSGQGRTTTAMVVAVLAFWHIQGFPEVGEEELVSVPDAKFTKGEFQVVMKVVQLLPDGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLSGQGRTTTAMVVAVLAFWHIQGFPEVGEEELVSVPDAKFTKGEFQVVMKVVQLLPDGH
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD RVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLRSLQYLERYVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLRSLQYLERYVC
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD LILFNAYLHLEKADSWQRPFSTWMQEVASKAGIYEILNELGFPELESGEDQPFSRLRYRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LILFNAYLHLEKADSWQRPFSTWMQEVASKAGIYEILNELGFPELESGEDQPFSRLRYRW
790 800 810 820 830 840
850
pF1KSD QEQSCSLEPSAPEDLL
::::::::::::::::
XP_016 QEQSCSLEPSAPEDLL
850
>>XP_011537940 (OMIM: 614656) PREDICTED: paladin isoform (856 aa)
initn: 5765 init1: 5765 opt: 5765 Z-score: 6539.5 bits: 1221.1 E(85289): 0
Smith-Waterman score: 5765; 99.9% identity (99.9% similar) in 856 aa overlap (1-856:1-856)
10 20 30 40 50 60
pF1KSD MGTTASTAQQTVSAGTPFEGLQGSGTMDSRHSVSIHSFQSTSLHNSKAKSIIPNKVAPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGTTASTAQQTVSAGTPFEGLQGSGTMDSRHSVSIHSFQSTSLHNSKAKSIIPNKVAPVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ITYNCKEEFQIHDELLKAHYTLGRLSDNTPEHYLVQGRYFLVRDVTEKMDVLGTVGSCGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ITYNCKEEFQIHDELLKAHYTLGRLSDNTPEHYLVQGRYFLVRDVTEKMDVLGTVGSCGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD PNFRQVQGGLTVFGMGQPSLLGFRRVLQKLQKDGHRECVIFCVREEPVLFLRADEDFVSY
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
XP_011 PNFRQVQGGLTVFGMGQPSLSGFRRVLQKLQKDGHRECVIFCVREEPVLFLRADEDFVSY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TPRDKQNLHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTEDLWGEPHAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPRDKQNLHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTEDLWGEPHAVA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IHGEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVLRETPSLLQLRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHGEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVLRETPSLLQLRD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD AHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQPEAAPTQAKPLPMEQFQVIQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQPEAAPTQAKPLPMEQFQVIQS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FLRMVPQGRRMVEEVDRAITACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLRMVPQGRRMVEEVDRAITACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ALWSLERYFYLILFNYYLHEQYPLAFALSFSRWLCAHPELYRLPVTLSSAGPVAPRDLIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALWSLERYFYLILFNYYLHEQYPLAFALSFSRWLCAHPELYRLPVTLSSAGPVAPRDLIA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD RGSLREDDLVSPDALSTVREMDVANFRRVPRMPIYGTAQPSAKALGSILAYLTDAKRRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGSLREDDLVSPDALSTVREMDVANFRRVPRMPIYGTAQPSAKALGSILAYLTDAKRRLR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD KVVWVSLREEAVLECDGHTYSLRWPGPPVAPDQLETLEAQLKAHLSEPPPGKEGPLTYRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVVWVSLREEAVLECDGHTYSLRWPGPPVAPDQLETLEAQLKAHLSEPPPGKEGPLTYRF
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD QTCLTMQEVFSQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QTCLTMQEVFSQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVFS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD CLSGQGRTTTAMVVAVLAFWHIQGFPEVGEEELVSVPDAKFTKGEFQVVMKVVQLLPDGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLSGQGRTTTAMVVAVLAFWHIQGFPEVGEEELVSVPDAKFTKGEFQVVMKVVQLLPDGH
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD RVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLRSLQYLERYVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLRSLQYLERYVC
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD LILFNAYLHLEKADSWQRPFSTWMQEVASKAGIYEILNELGFPELESGEDQPFSRLRYRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LILFNAYLHLEKADSWQRPFSTWMQEVASKAGIYEILNELGFPELESGEDQPFSRLRYRW
790 800 810 820 830 840
850
pF1KSD QEQSCSLEPSAPEDLL
::::::::::::::::
XP_011 QEQSCSLEPSAPEDLL
850
>>XP_011537939 (OMIM: 614656) PREDICTED: paladin isoform (856 aa)
initn: 5765 init1: 5765 opt: 5765 Z-score: 6539.5 bits: 1221.1 E(85289): 0
Smith-Waterman score: 5765; 99.9% identity (99.9% similar) in 856 aa overlap (1-856:1-856)
10 20 30 40 50 60
pF1KSD MGTTASTAQQTVSAGTPFEGLQGSGTMDSRHSVSIHSFQSTSLHNSKAKSIIPNKVAPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGTTASTAQQTVSAGTPFEGLQGSGTMDSRHSVSIHSFQSTSLHNSKAKSIIPNKVAPVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ITYNCKEEFQIHDELLKAHYTLGRLSDNTPEHYLVQGRYFLVRDVTEKMDVLGTVGSCGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ITYNCKEEFQIHDELLKAHYTLGRLSDNTPEHYLVQGRYFLVRDVTEKMDVLGTVGSCGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD PNFRQVQGGLTVFGMGQPSLLGFRRVLQKLQKDGHRECVIFCVREEPVLFLRADEDFVSY
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
XP_011 PNFRQVQGGLTVFGMGQPSLSGFRRVLQKLQKDGHRECVIFCVREEPVLFLRADEDFVSY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TPRDKQNLHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTEDLWGEPHAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPRDKQNLHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTEDLWGEPHAVA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IHGEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVLRETPSLLQLRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHGEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVLRETPSLLQLRD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD AHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQPEAAPTQAKPLPMEQFQVIQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQPEAAPTQAKPLPMEQFQVIQS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FLRMVPQGRRMVEEVDRAITACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLRMVPQGRRMVEEVDRAITACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ALWSLERYFYLILFNYYLHEQYPLAFALSFSRWLCAHPELYRLPVTLSSAGPVAPRDLIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALWSLERYFYLILFNYYLHEQYPLAFALSFSRWLCAHPELYRLPVTLSSAGPVAPRDLIA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD RGSLREDDLVSPDALSTVREMDVANFRRVPRMPIYGTAQPSAKALGSILAYLTDAKRRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGSLREDDLVSPDALSTVREMDVANFRRVPRMPIYGTAQPSAKALGSILAYLTDAKRRLR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD KVVWVSLREEAVLECDGHTYSLRWPGPPVAPDQLETLEAQLKAHLSEPPPGKEGPLTYRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVVWVSLREEAVLECDGHTYSLRWPGPPVAPDQLETLEAQLKAHLSEPPPGKEGPLTYRF
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD QTCLTMQEVFSQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QTCLTMQEVFSQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVFS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD CLSGQGRTTTAMVVAVLAFWHIQGFPEVGEEELVSVPDAKFTKGEFQVVMKVVQLLPDGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLSGQGRTTTAMVVAVLAFWHIQGFPEVGEEELVSVPDAKFTKGEFQVVMKVVQLLPDGH
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD RVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLRSLQYLERYVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLRSLQYLERYVC
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD LILFNAYLHLEKADSWQRPFSTWMQEVASKAGIYEILNELGFPELESGEDQPFSRLRYRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LILFNAYLHLEKADSWQRPFSTWMQEVASKAGIYEILNELGFPELESGEDQPFSRLRYRW
790 800 810 820 830 840
850
pF1KSD QEQSCSLEPSAPEDLL
::::::::::::::::
XP_011 QEQSCSLEPSAPEDLL
850
856 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 05:42:02 2016 done: Thu Nov 3 05:42:03 2016
Total Scan time: 12.180 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]