Result of FASTA (omim) for
pF1KSDA1252
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1252, 568 aa
1>>>pF1KSDA1252 568 - 568 aa - 568 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6282+/-0.000485; mu= 16.4324+/- 0.030
mean_var=64.1635+/-13.207, 0's: 0 Z-trim(108.8): 36 B-trim: 689 in 1/49
Lambda= 0.160114
statistics sampled from 16935 (16960) to 16935 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.55), E-opt: 0.2 (0.199), width: 16
Scan time: 8.910
The best scores are: opt bits E(85289)
XP_011538618 (OMIM: 603729) PREDICTED: sphingosine ( 568) 3795 886.1 0
XP_005270320 (OMIM: 603729) PREDICTED: sphingosine ( 568) 3795 886.1 0
NP_003892 (OMIM: 603729) sphingosine-1-phosphate l ( 568) 3795 886.1 0
XP_011538619 (OMIM: 603729) PREDICTED: sphingosine ( 568) 3795 886.1 0
XP_011538620 (OMIM: 603729) PREDICTED: sphingosine ( 488) 3234 756.4 4.6e-218
XP_006718116 (OMIM: 603729) PREDICTED: sphingosine ( 488) 3234 756.4 4.6e-218
>>XP_011538618 (OMIM: 603729) PREDICTED: sphingosine-1-p (568 aa)
initn: 3795 init1: 3795 opt: 3795 Z-score: 4735.2 bits: 886.1 E(85289): 0
Smith-Waterman score: 3795; 100.0% identity (100.0% similar) in 568 aa overlap (1-568:1-568)
10 20 30 40 50 60
pF1KSD MPSTDLLMLKAFEPYLEILEVYSTKAKNYVNGHCTKYEPWQLIAWSVVWTLLIVWGYEFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPSTDLLMLKAFEPYLEILEVYSTKAKNYVNGHCTKYEPWQLIAWSVVWTLLIVWGYEFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FQPESLWSRFKKKCFKLTRKMPIIGRKIQDKLNKTKDDISKNMSFLKVDKEYVKALPSQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FQPESLWSRFKKKCFKLTRKMPIIGRKIQDKLNKTKDDISKNMSFLKVDKEYVKALPSQG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD AHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD VAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEAT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD KQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQLQFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQLQFP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQTTVDRNMVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQTTVDRNMVAE
490 500 510 520 530 540
550 560
pF1KSD LSSVFLDSLYSTDTVTQGSQMNGSPKPH
::::::::::::::::::::::::::::
XP_011 LSSVFLDSLYSTDTVTQGSQMNGSPKPH
550 560
>>XP_005270320 (OMIM: 603729) PREDICTED: sphingosine-1-p (568 aa)
initn: 3795 init1: 3795 opt: 3795 Z-score: 4735.2 bits: 886.1 E(85289): 0
Smith-Waterman score: 3795; 100.0% identity (100.0% similar) in 568 aa overlap (1-568:1-568)
10 20 30 40 50 60
pF1KSD MPSTDLLMLKAFEPYLEILEVYSTKAKNYVNGHCTKYEPWQLIAWSVVWTLLIVWGYEFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MPSTDLLMLKAFEPYLEILEVYSTKAKNYVNGHCTKYEPWQLIAWSVVWTLLIVWGYEFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FQPESLWSRFKKKCFKLTRKMPIIGRKIQDKLNKTKDDISKNMSFLKVDKEYVKALPSQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FQPESLWSRFKKKCFKLTRKMPIIGRKIQDKLNKTKDDISKNMSFLKVDKEYVKALPSQG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD AHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD VAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEAT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD KQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQLQFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQLQFP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQTTVDRNMVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQTTVDRNMVAE
490 500 510 520 530 540
550 560
pF1KSD LSSVFLDSLYSTDTVTQGSQMNGSPKPH
::::::::::::::::::::::::::::
XP_005 LSSVFLDSLYSTDTVTQGSQMNGSPKPH
550 560
>>NP_003892 (OMIM: 603729) sphingosine-1-phosphate lyase (568 aa)
initn: 3795 init1: 3795 opt: 3795 Z-score: 4735.2 bits: 886.1 E(85289): 0
Smith-Waterman score: 3795; 100.0% identity (100.0% similar) in 568 aa overlap (1-568:1-568)
10 20 30 40 50 60
pF1KSD MPSTDLLMLKAFEPYLEILEVYSTKAKNYVNGHCTKYEPWQLIAWSVVWTLLIVWGYEFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MPSTDLLMLKAFEPYLEILEVYSTKAKNYVNGHCTKYEPWQLIAWSVVWTLLIVWGYEFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FQPESLWSRFKKKCFKLTRKMPIIGRKIQDKLNKTKDDISKNMSFLKVDKEYVKALPSQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FQPESLWSRFKKKCFKLTRKMPIIGRKIQDKLNKTKDDISKNMSFLKVDKEYVKALPSQG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD AHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD VAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEAT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD KQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQLQFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQLQFP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQTTVDRNMVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQTTVDRNMVAE
490 500 510 520 530 540
550 560
pF1KSD LSSVFLDSLYSTDTVTQGSQMNGSPKPH
::::::::::::::::::::::::::::
NP_003 LSSVFLDSLYSTDTVTQGSQMNGSPKPH
550 560
>>XP_011538619 (OMIM: 603729) PREDICTED: sphingosine-1-p (568 aa)
initn: 3795 init1: 3795 opt: 3795 Z-score: 4735.2 bits: 886.1 E(85289): 0
Smith-Waterman score: 3795; 100.0% identity (100.0% similar) in 568 aa overlap (1-568:1-568)
10 20 30 40 50 60
pF1KSD MPSTDLLMLKAFEPYLEILEVYSTKAKNYVNGHCTKYEPWQLIAWSVVWTLLIVWGYEFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPSTDLLMLKAFEPYLEILEVYSTKAKNYVNGHCTKYEPWQLIAWSVVWTLLIVWGYEFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FQPESLWSRFKKKCFKLTRKMPIIGRKIQDKLNKTKDDISKNMSFLKVDKEYVKALPSQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FQPESLWSRFKKKCFKLTRKMPIIGRKIQDKLNKTKDDISKNMSFLKVDKEYVKALPSQG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD AHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD VAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEAT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD KQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQLQFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQLQFP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQTTVDRNMVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQTTVDRNMVAE
490 500 510 520 530 540
550 560
pF1KSD LSSVFLDSLYSTDTVTQGSQMNGSPKPH
::::::::::::::::::::::::::::
XP_011 LSSVFLDSLYSTDTVTQGSQMNGSPKPH
550 560
>>XP_011538620 (OMIM: 603729) PREDICTED: sphingosine-1-p (488 aa)
initn: 3234 init1: 3234 opt: 3234 Z-score: 4035.9 bits: 756.4 E(85289): 4.6e-218
Smith-Waterman score: 3234; 100.0% identity (100.0% similar) in 488 aa overlap (81-568:1-488)
60 70 80 90 100 110
pF1KSD LLIVWGYEFVFQPESLWSRFKKKCFKLTRKMPIIGRKIQDKLNKTKDDISKNMSFLKVDK
::::::::::::::::::::::::::::::
XP_011 MPIIGRKIQDKLNKTKDDISKNMSFLKVDK
10 20 30
120 130 140 150 160 170
pF1KSD EYVKALPSQGLSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EYVKALPSQGLSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWS
40 50 60 70 80 90
180 190 200 210 220 230
pF1KSD NPLHPDIFPGLRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NPLHPDIFPGLRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGI
100 110 120 130 140 150
240 250 260 270 280 290
pF1KSD KTPEIVAPQSAHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KTPEIVAPQSAHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQF
160 170 180 190 200 210
300 310 320 330 340 350
pF1KSD PHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISAD
220 230 240 250 260 270
360 370 380 390 400 410
pF1KSD THKYGYAPKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THKYGYAPKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMH
280 290 300 310 320 330
420 430 440 450 460 470
pF1KSD FGENGYVEATKQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGENGYVEATKQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAK
340 350 360 370 380 390
480 490 500 510 520 530
pF1KSD GWNLNQLQFPPSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GWNLNQLQFPPSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQ
400 410 420 430 440 450
540 550 560
pF1KSD TTVDRNMVAELSSVFLDSLYSTDTVTQGSQMNGSPKPH
::::::::::::::::::::::::::::::::::::::
XP_011 TTVDRNMVAELSSVFLDSLYSTDTVTQGSQMNGSPKPH
460 470 480
>>XP_006718116 (OMIM: 603729) PREDICTED: sphingosine-1-p (488 aa)
initn: 3234 init1: 3234 opt: 3234 Z-score: 4035.9 bits: 756.4 E(85289): 4.6e-218
Smith-Waterman score: 3234; 100.0% identity (100.0% similar) in 488 aa overlap (81-568:1-488)
60 70 80 90 100 110
pF1KSD LLIVWGYEFVFQPESLWSRFKKKCFKLTRKMPIIGRKIQDKLNKTKDDISKNMSFLKVDK
::::::::::::::::::::::::::::::
XP_006 MPIIGRKIQDKLNKTKDDISKNMSFLKVDK
10 20 30
120 130 140 150 160 170
pF1KSD EYVKALPSQGLSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EYVKALPSQGLSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWS
40 50 60 70 80 90
180 190 200 210 220 230
pF1KSD NPLHPDIFPGLRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NPLHPDIFPGLRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGI
100 110 120 130 140 150
240 250 260 270 280 290
pF1KSD KTPEIVAPQSAHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KTPEIVAPQSAHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQF
160 170 180 190 200 210
300 310 320 330 340 350
pF1KSD PHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISAD
220 230 240 250 260 270
360 370 380 390 400 410
pF1KSD THKYGYAPKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 THKYGYAPKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMH
280 290 300 310 320 330
420 430 440 450 460 470
pF1KSD FGENGYVEATKQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FGENGYVEATKQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAK
340 350 360 370 380 390
480 490 500 510 520 530
pF1KSD GWNLNQLQFPPSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GWNLNQLQFPPSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQ
400 410 420 430 440 450
540 550 560
pF1KSD TTVDRNMVAELSSVFLDSLYSTDTVTQGSQMNGSPKPH
::::::::::::::::::::::::::::::::::::::
XP_006 TTVDRNMVAELSSVFLDSLYSTDTVTQGSQMNGSPKPH
460 470 480
568 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 05:33:46 2016 done: Thu Nov 3 05:33:47 2016
Total Scan time: 8.910 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]