Result of FASTA (omim) for
pF1KSDA0997
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0997, 644 aa
1>>>pF1KSDA0997 644 - 644 aa - 644 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5722+/-0.00055; mu= 13.3681+/- 0.034
mean_var=814.8333+/-228.061, 0's: 0 Z-trim(115.2): 84 B-trim: 1383 in 1/53
Lambda= 0.044930
statistics sampled from 25499 (25576) to 25499 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.3), width: 16
Scan time: 11.460
The best scores are: opt bits E(85289)
NP_055765 (OMIM: 616578) zinc finger and BTB domai ( 644) 4407 302.9 2.4e-81
XP_011534870 (OMIM: 616578) PREDICTED: zinc finger ( 644) 4407 302.9 2.4e-81
NP_001116801 (OMIM: 616578) zinc finger and BTB do ( 713) 4327 297.8 9e-80
XP_011534868 (OMIM: 616578) PREDICTED: zinc finger ( 713) 4327 297.8 9e-80
XP_016876583 (OMIM: 616578) PREDICTED: zinc finger ( 713) 4327 297.8 9e-80
XP_005267467 (OMIM: 616578) PREDICTED: zinc finger ( 713) 4327 297.8 9e-80
XP_016876584 (OMIM: 616578) PREDICTED: zinc finger ( 713) 4327 297.8 9e-80
NP_003434 (OMIM: 604084) zinc finger and BTB domai ( 803) 426 45.0 0.0012
NP_001274532 (OMIM: 604084) zinc finger and BTB do ( 810) 426 45.0 0.0012
>>NP_055765 (OMIM: 616578) zinc finger and BTB domain-co (644 aa)
initn: 4407 init1: 4407 opt: 4407 Z-score: 1581.4 bits: 302.9 E(85289): 2.4e-81
Smith-Waterman score: 4407; 99.8% identity (100.0% similar) in 644 aa overlap (1-644:1-644)
10 20 30 40 50 60
pF1KSD MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD QLGNFPEPLFDVCKKSSVSKLSNPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
NP_055 QLGNFPEPLFDVCKKSSVSKLSTPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
550 560 570 580 590 600
610 620 630 640
pF1KSD TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGPSKPVEK
::::::::::::::::::::::::::::::::::::::::::::
NP_055 TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGPSKPVEK
610 620 630 640
>>XP_011534870 (OMIM: 616578) PREDICTED: zinc finger and (644 aa)
initn: 4407 init1: 4407 opt: 4407 Z-score: 1581.4 bits: 302.9 E(85289): 2.4e-81
Smith-Waterman score: 4407; 99.8% identity (100.0% similar) in 644 aa overlap (1-644:1-644)
10 20 30 40 50 60
pF1KSD MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD QLGNFPEPLFDVCKKSSVSKLSNPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_011 QLGNFPEPLFDVCKKSSVSKLSTPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
550 560 570 580 590 600
610 620 630 640
pF1KSD TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGPSKPVEK
::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGPSKPVEK
610 620 630 640
>>NP_001116801 (OMIM: 616578) zinc finger and BTB domain (713 aa)
initn: 4327 init1: 4327 opt: 4327 Z-score: 1553.1 bits: 297.8 E(85289): 9e-80
Smith-Waterman score: 4327; 99.8% identity (100.0% similar) in 632 aa overlap (1-632:1-632)
10 20 30 40 50 60
pF1KSD MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD QLGNFPEPLFDVCKKSSVSKLSNPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
NP_001 QLGNFPEPLFDVCKKSSVSKLSTPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
550 560 570 580 590 600
610 620 630 640
pF1KSD TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGPSKPVEK
::::::::::::::::::::::::::::::::
NP_001 TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMARYVCSICDQGNFRKHDHVRHMISHLSAG
610 620 630 640 650 660
NP_001 ETICQVCFQIFPNNEQLEQHMDVHLYTCGICGAKFNLRKDMRSHYNAKHLKRT
670 680 690 700 710
>>XP_011534868 (OMIM: 616578) PREDICTED: zinc finger and (713 aa)
initn: 4327 init1: 4327 opt: 4327 Z-score: 1553.1 bits: 297.8 E(85289): 9e-80
Smith-Waterman score: 4327; 99.8% identity (100.0% similar) in 632 aa overlap (1-632:1-632)
10 20 30 40 50 60
pF1KSD MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD QLGNFPEPLFDVCKKSSVSKLSNPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_011 QLGNFPEPLFDVCKKSSVSKLSTPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
550 560 570 580 590 600
610 620 630 640
pF1KSD TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGPSKPVEK
::::::::::::::::::::::::::::::::
XP_011 TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMARYVCSICDQGNFRKHDHVRHMISHLSAG
610 620 630 640 650 660
XP_011 ETICQVCFQIFPNNEQLEQHMDVHLYTCGICGAKFNLRKDMRSHYNAKHLKRT
670 680 690 700 710
>>XP_016876583 (OMIM: 616578) PREDICTED: zinc finger and (713 aa)
initn: 4327 init1: 4327 opt: 4327 Z-score: 1553.1 bits: 297.8 E(85289): 9e-80
Smith-Waterman score: 4327; 99.8% identity (100.0% similar) in 632 aa overlap (1-632:1-632)
10 20 30 40 50 60
pF1KSD MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD QLGNFPEPLFDVCKKSSVSKLSNPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_016 QLGNFPEPLFDVCKKSSVSKLSTPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
550 560 570 580 590 600
610 620 630 640
pF1KSD TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGPSKPVEK
::::::::::::::::::::::::::::::::
XP_016 TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMARYVCSICDQGNFRKHDHVRHMISHLSAG
610 620 630 640 650 660
XP_016 ETICQVCFQIFPNNEQLEQHMDVHLYTCGICGAKFNLRKDMRSHYNAKHLKRT
670 680 690 700 710
>>XP_005267467 (OMIM: 616578) PREDICTED: zinc finger and (713 aa)
initn: 4327 init1: 4327 opt: 4327 Z-score: 1553.1 bits: 297.8 E(85289): 9e-80
Smith-Waterman score: 4327; 99.8% identity (100.0% similar) in 632 aa overlap (1-632:1-632)
10 20 30 40 50 60
pF1KSD MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD QLGNFPEPLFDVCKKSSVSKLSNPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_005 QLGNFPEPLFDVCKKSSVSKLSTPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
550 560 570 580 590 600
610 620 630 640
pF1KSD TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGPSKPVEK
::::::::::::::::::::::::::::::::
XP_005 TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMARYVCSICDQGNFRKHDHVRHMISHLSAG
610 620 630 640 650 660
XP_005 ETICQVCFQIFPNNEQLEQHMDVHLYTCGICGAKFNLRKDMRSHYNAKHLKRT
670 680 690 700 710
>>XP_016876584 (OMIM: 616578) PREDICTED: zinc finger and (713 aa)
initn: 4327 init1: 4327 opt: 4327 Z-score: 1553.1 bits: 297.8 E(85289): 9e-80
Smith-Waterman score: 4327; 99.8% identity (100.0% similar) in 632 aa overlap (1-632:1-632)
10 20 30 40 50 60
pF1KSD MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD QLGNFPEPLFDVCKKSSVSKLSNPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_016 QLGNFPEPLFDVCKKSSVSKLSTPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
550 560 570 580 590 600
610 620 630 640
pF1KSD TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGPSKPVEK
::::::::::::::::::::::::::::::::
XP_016 TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMARYVCSICDQGNFRKHDHVRHMISHLSAG
610 620 630 640 650 660
XP_016 ETICQVCFQIFPNNEQLEQHMDVHLYTCGICGAKFNLRKDMRSHYNAKHLKRT
670 680 690 700 710
>>NP_003434 (OMIM: 604084) zinc finger and BTB domain-co (803 aa)
initn: 571 init1: 250 opt: 426 Z-score: 186.2 bits: 45.0 E(85289): 0.0012
Smith-Waterman score: 486; 23.8% identity (51.2% similar) in 689 aa overlap (1-636:1-645)
10 20 30 40 50 60
pF1KSD MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
: :.::..::.:::.::. :.:::: ...: ..:.:::::::::: ::.:.:.. :...
NP_003 MDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD-QKDV
10 20 30 40 50
70 80 90 100 110
pF1KSD AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNV-PDC--LEDIQ
..:..:: : . .:.::: .:. .: . .. .. ..::. .. : :...
NP_003 VHLDISN----AAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKSLA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD DADCSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADE
. : . . . ... ..: : :. :: . .: :: : .:. :
NP_003 EPATSPGGNAEALATEGGDK-----RAKEEKVATS--TLSRLEQAGRSTPIGP-SRDLKE
120 130 140 150 160
180 190 200 210 220 230
pF1KSD ESLQLGNFPEPLFDVCKKSSVSKLSNPKE-RVSRRFGRSFTCDSCGFGFSCEKLLDEHVL
: .. . .:... . : : . . : . . ... : :. .. .
NP_003 ERGGQAQSAASGAEQTEKADAPREPPPVELKPDPTSGMAAAEAEAALSESSEQEMEVEPA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KSD TCTNRHLYQNTRSYHRIVDIRDGKDSNIKAEFGE--KDSSKTFSAQTDKYRGDTSQAADD
... .. .. .. . . :. . . : :: ... . :: ::. . :.:
NP_003 RKGEEEQKEQEEQEEEGAGPAEVKEEGSQLENGEAPEENENEESAGTDSGQELGSEARGL
230 240 250 260 270 280
300 310 320 330 340 350
pF1KSD SASTTGSRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNE
..: :.: : . . . . .. . : . . : : : : :. ..:..
NP_003 RSGTYGDRTESKAYGSVIHKCEDCGKEFTHTGNFKRHIRIHTGE-KPFSC-----RECSK
290 300 310 320 330 340
360 370 380 390 400 410
pF1KSD STDND---ELEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNS
. .. . ... . :. : :: :: : : ... ...: .:
NP_003 AFSDPAACKAHEKTHSPLKPYGCEE---CGKSYR--LISLLNLHKKRHSGEARYR-----
350 360 370 380 390
420 430 440 450 460
pF1KSD SPVQEDAENASCELCG-LTITEEDLSSHYLAKHIENICACGKCGQILV----KGRQLQEH
:: :: : : .:. : :.. :. : ::. . : :.:. :
NP_003 -----------CEDCGKLFTTSGNLKRHQLVHSGEKPYQCDYCGRSFSDPTSKMRHLETH
400 410 420 430 440
470 480 490 500 510
pF1KSD ----AQRCGEPQ-DLTMNGLGNTEE--KMDLEENPDEQSEIRDMFVEMLDDFRDNHYQIN
..: :. : .: .:: . :. . ..: . : .:. . : : .:.
NP_003 DTDKEHKC--PHCDKKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKR--HLRIH
450 460 470 480 490
520 530 540 550
pF1KSD SIQKKQLFKH-------------------SACPFRCPNCGQRFETENLVVEHMSS-----
: .: . : . : .: ::. : . .. :. .
NP_003 SGEKPYVCIHCQRQFADPGALQRHVRIHTGEKPCQCVMCGKAFTQASSLIAHVRQHTGEK
500 510 520 530 540 550
560 570 580 590 600
pF1KSD ---C--LDQDMFKSAIMEENERDHR--RKHFCNLCGKGFYQRCHLREHYTVHTKEKQFVC
: . . .:. . .. : : : : :..:.:.: . : .: .:: :: ..:
NP_003 PYVCERCGKRFVQSSQLANHIRHHDNIRPHKCSVCSKAFVNVGDLSKHIIIHTGEKPYLC
560 570 580 590 600 610
610 620 630 640
pF1KSD QTCGKQFLRERQLRLH-NDMHKGMASGEIGPSKPVEK
. ::. : : .:: : . .:.: :. .:
NP_003 DKCGRGFNRVDNLRSHVKTVHQGKAGIKILEPEEGSEVSVVTVDDMVTLATEALAATAVT
620 630 640 650 660 670
>>NP_001274532 (OMIM: 604084) zinc finger and BTB domain (810 aa)
initn: 571 init1: 250 opt: 426 Z-score: 186.2 bits: 45.0 E(85289): 0.0012
Smith-Waterman score: 486; 23.8% identity (51.2% similar) in 689 aa overlap (1-636:1-645)
10 20 30 40 50 60
pF1KSD MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
: :.::..::.:::.::. :.:::: ...: ..:.:::::::::: ::.:.:.. :...
NP_001 MDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD-QKDV
10 20 30 40 50
70 80 90 100 110
pF1KSD AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNV-PDC--LEDIQ
..:..:: : . .:.::: .:. .: . .. .. ..::. .. : :...
NP_001 VHLDISN----AAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKSLA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD DADCSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADE
. : . . . ... ..: : :. :: . .: :: : .:. :
NP_001 EPATSPGGNAEALATEGGDK-----RAKEEKVATS--TLSRLEQAGRSTPIGP-SRDLKE
120 130 140 150 160
180 190 200 210 220 230
pF1KSD ESLQLGNFPEPLFDVCKKSSVSKLSNPKE-RVSRRFGRSFTCDSCGFGFSCEKLLDEHVL
: .. . .:... . : : . . : . . ... : :. .. .
NP_001 ERGGQAQSAASGAEQTEKADAPREPPPVELKPDPTSGMAAAEAEAALSESSEQEMEVEPA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KSD TCTNRHLYQNTRSYHRIVDIRDGKDSNIKAEFGE--KDSSKTFSAQTDKYRGDTSQAADD
... .. .. .. . . :. . . : :: ... . :: ::. . :.:
NP_001 RKGEEEQKEQEEQEEEGAGPAEVKEEGSQLENGEAPEENENEESAGTDSGQELGSEARGL
230 240 250 260 270 280
300 310 320 330 340 350
pF1KSD SASTTGSRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNE
..: :.: : . . . . .. . : . . : : : : :. ..:..
NP_001 RSGTYGDRTESKAYGSVIHKCEDCGKEFTHTGNFKRHIRIHTGE-KPFSC-----RECSK
290 300 310 320 330 340
360 370 380 390 400 410
pF1KSD STDND---ELEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNS
. .. . ... . :. : :: :: : : ... ...: .:
NP_001 AFSDPAACKAHEKTHSPLKPYGCEE---CGKSYR--LISLLNLHKKRHSGEARYR-----
350 360 370 380 390
420 430 440 450 460
pF1KSD SPVQEDAENASCELCG-LTITEEDLSSHYLAKHIENICACGKCGQILV----KGRQLQEH
:: :: : : .:. : :.. :. : ::. . : :.:. :
NP_001 -----------CEDCGKLFTTSGNLKRHQLVHSGEKPYQCDYCGRSFSDPTSKMRHLETH
400 410 420 430 440
470 480 490 500 510
pF1KSD ----AQRCGEPQ-DLTMNGLGNTEE--KMDLEENPDEQSEIRDMFVEMLDDFRDNHYQIN
..: :. : .: .:: . :. . ..: . : .:. . : : .:.
NP_001 DTDKEHKC--PHCDKKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKR--HLRIH
450 460 470 480 490
520 530 540 550
pF1KSD SIQKKQLFKH-------------------SACPFRCPNCGQRFETENLVVEHMSS-----
: .: . : . : .: ::. : . .. :. .
NP_001 SGEKPYVCIHCQRQFADPGALQRHVRIHTGEKPCQCVMCGKAFTQASSLIAHVRQHTGEK
500 510 520 530 540 550
560 570 580 590 600
pF1KSD ---C--LDQDMFKSAIMEENERDHR--RKHFCNLCGKGFYQRCHLREHYTVHTKEKQFVC
: . . .:. . .. : : : : :..:.:.: . : .: .:: :: ..:
NP_001 PYVCERCGKRFVQSSQLANHIRHHDNIRPHKCSVCSKAFVNVGDLSKHIIIHTGEKPYLC
560 570 580 590 600 610
610 620 630 640
pF1KSD QTCGKQFLRERQLRLH-NDMHKGMASGEIGPSKPVEK
. ::. : : .:: : . .:.: :. .:
NP_001 DKCGRGFNRVDNLRSHVKTVHQGKAGIKILEPEEGSEVSVVTVDDMVTLATEALAATAVT
620 630 640 650 660 670
644 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 04:35:05 2016 done: Thu Nov 3 04:35:06 2016
Total Scan time: 11.460 Total Display time: 0.160
Function used was FASTA [36.3.4 Apr, 2011]