FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA0997, 644 aa
  1>>>pF1KSDA0997 644 - 644 aa - 644 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.7432+/-0.0017; mu= -16.5985+/- 0.095
 mean_var=698.2061+/-200.728, 0's: 0 Z-trim(108.2): 68  B-trim: 1086 in 2/50
 Lambda= 0.048538
 statistics sampled from 10003 (10036) to 10003 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.308), width:  16
 Scan time:  3.590

The best scores are:                                      opt bits E(32554)
CCDS32097.1 ZBTB1 gene_id:22890|Hs108|chr14        ( 644) 4407 325.2 1.7e-88
CCDS45126.1 ZBTB1 gene_id:22890|Hs108|chr14        ( 713) 4327 319.6   9e-87


>>CCDS32097.1 ZBTB1 gene_id:22890|Hs108|chr14             (644 aa)
 initn: 4407 init1: 4407 opt: 4407  Z-score: 1702.1  bits: 325.2 E(32554): 1.7e-88
Smith-Waterman score: 4407; 99.8% identity (100.0% similar) in 644 aa overlap (1-644:1-644)

               10        20        30        40        50        60
pF1KSD MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD QLGNFPEPLFDVCKKSSVSKLSNPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
       ::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
CCDS32 QLGNFPEPLFDVCKKSSVSKLSTPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KSD QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
              550       560       570       580       590       600

              610       620       630       640    
pF1KSD TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGPSKPVEK
       ::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGPSKPVEK
              610       620       630       640    

>>CCDS45126.1 ZBTB1 gene_id:22890|Hs108|chr14             (713 aa)
 initn: 4327 init1: 4327 opt: 4327  Z-score: 1671.3  bits: 319.6 E(32554): 9e-87
Smith-Waterman score: 4327; 99.8% identity (100.0% similar) in 632 aa overlap (1-632:1-632)

               10        20        30        40        50        60
pF1KSD MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAKPSHSSYVLQQLNNQREWGFLCDCCIAIDDIYFQAHKAVLAACSSYFRMFFMNHQHST
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 AQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDAD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 CSSSKCSSSASSKQNSKMIFGVRMYEDTVARNGNEANRWCAEPSSTVNTPHNREADEESL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD QLGNFPEPLFDVCKKSSVSKLSNPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
       ::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
CCDS45 QLGNFPEPLFDVCKKSSVSKLSTPKERVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RHLYQNTRSYHRIVDIRDGKDSNIKAEFGEKDSSKTFSAQTDKYRGDTSQAADDSASTTG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SRKSSTVESEIASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDCNESTDNDE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LEDEPEEPFYRYYVEEDVSIKKSGRKTLKPRMSVSADERGGLENMRPPNNSSPVQEDAEN
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ASCELCGLTITEEDLSSHYLAKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTMNG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LGNTEEKMDLEENPDEQSEIRDMFVEMLDDFRDNHYQINSIQKKQLFKHSACPFRCPNCG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KSD QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QRFETENLVVEHMSSCLDQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVH
              550       560       570       580       590       600

              610       620       630       640                    
pF1KSD TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGPSKPVEK                
       ::::::::::::::::::::::::::::::::                            
CCDS45 TKEKQFVCQTCGKQFLRERQLRLHNDMHKGMARYVCSICDQGNFRKHDHVRHMISHLSAG
              610       620       630       640       650       660

CCDS45 ETICQVCFQIFPNNEQLEQHMDVHLYTCGICGAKFNLRKDMRSHYNAKHLKRT
              670       680       690       700       710   




644 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 04:35:04 2016 done: Thu Nov  3 04:35:05 2016
 Total Scan time:  3.590 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]