Result of FASTA (ccds) for
pF1KSDA0962
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0962, 782 aa
1>>>pF1KSDA0962 782 - 782 aa - 782 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4238+/-0.00104; mu= 19.8460+/- 0.063
mean_var=70.6946+/-13.869, 0's: 0 Z-trim(103.2): 66 B-trim: 3 in 1/50
Lambda= 0.152539
statistics sampled from 7254 (7321) to 7254 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.591), E-opt: 0.2 (0.225), width: 16
Scan time: 3.730
The best scores are: opt bits E(32554)
CCDS30606.1 DNAJC16 gene_id:23341|Hs108|chr1 ( 782) 5208 1156.0 0
CCDS72710.1 DNAJC16 gene_id:23341|Hs108|chr1 ( 470) 3103 692.6 3.8e-199
CCDS3277.1 DNAJB11 gene_id:51726|Hs108|chr3 ( 358) 308 77.5 4.3e-14
CCDS14008.1 DNAJB7 gene_id:150353|Hs108|chr22 ( 309) 295 74.6 2.8e-13
CCDS45400.1 DNAJA3 gene_id:9093|Hs108|chr16 ( 453) 285 72.5 1.8e-12
CCDS10515.1 DNAJA3 gene_id:9093|Hs108|chr16 ( 480) 285 72.5 1.8e-12
CCDS5752.1 DNAJB9 gene_id:4189|Hs108|chr7 ( 223) 279 71.0 2.4e-12
CCDS74613.1 DNAJC10 gene_id:54431|Hs108|chr2 ( 747) 283 72.2 3.6e-12
CCDS33345.1 DNAJC10 gene_id:54431|Hs108|chr2 ( 793) 283 72.2 3.8e-12
CCDS7316.2 DNAJB12 gene_id:54788|Hs108|chr10 ( 409) 277 70.7 5.5e-12
CCDS47755.1 DNAJB6 gene_id:10049|Hs108|chr7 ( 241) 271 69.2 8.8e-12
CCDS35007.1 DNAJB5 gene_id:25822|Hs108|chr9 ( 348) 272 69.5 1e-11
CCDS5946.1 DNAJB6 gene_id:10049|Hs108|chr7 ( 326) 271 69.3 1.1e-11
CCDS47959.1 DNAJB5 gene_id:25822|Hs108|chr9 ( 420) 272 69.6 1.2e-11
CCDS47960.2 DNAJB5 gene_id:25822|Hs108|chr9 ( 462) 272 69.6 1.3e-11
CCDS684.1 DNAJB4 gene_id:11080|Hs108|chr1 ( 337) 268 68.7 1.8e-11
CCDS4214.1 DNAJC18 gene_id:202052|Hs108|chr5 ( 358) 266 68.2 2.6e-11
CCDS34035.1 DNAJB14 gene_id:79982|Hs108|chr4 ( 379) 261 67.1 5.9e-11
CCDS10726.1 DNAJA2 gene_id:10294|Hs108|chr16 ( 412) 260 66.9 7.4e-11
CCDS12312.1 DNAJB1 gene_id:3337|Hs108|chr19 ( 340) 257 66.2 9.9e-11
>>CCDS30606.1 DNAJC16 gene_id:23341|Hs108|chr1 (782 aa)
initn: 5208 init1: 5208 opt: 5208 Z-score: 6189.1 bits: 1156.0 E(32554): 0
Smith-Waterman score: 5208; 100.0% identity (100.0% similar) in 782 aa overlap (1-782:1-782)
10 20 30 40 50 60
pF1KSD MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQQQQREYRFRHFHENFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 NKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQQQQREYRFRHFHENFY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD FDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYLIKITSDWCFSCIHIEPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYLIKITSDWCFSCIHIEPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD WKEVIQELEELGVGIGVVHAGYERRLAHHLGAHSTPSILGIINGKISFFHNAVVRENLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 WKEVIQELEELGVGIGVVHAGYERRLAHHLGAHSTPSILGIINGKISFFHNAVVRENLRQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD FVESLLPGNLVEKVTNKNYVRFLSGWQQENKPHVLLFDQTPIVPLLYKLTAFAYKDYLSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FVESLLPGNLVEKVTNKNYVRFLSGWQQENKPHVLLFDQTPIVPLLYKLTAFAYKDYLSF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD GYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINRPADVIQARGMKKQIIDDFITRNKYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 GYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINRPADVIQARGMKKQIIDDFITRNKYL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LAARLTSQKLFHELCPVKRSHRQRKYCVVLLTAETTKLSKPFEAFLSFALANTQDTVRFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 LAARLTSQKLFHELCPVKRSHRQRKYCVVLLTAETTKLSKPFEAFLSFALANTQDTVRFV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD HVYSNRQQEFADTLLPDSEAFQGKSAVSILERRNTAGRVVYKTLEDPWIGSESDKFILLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 HVYSNRQQEFADTLLPDSEAFQGKSAVSILERRNTAGRVVYKTLEDPWIGSESDKFILLG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD YLDQLRKDPALLSSEAVLPDLTDELAPVFLLRWFYSASDYISDCWDSIFHNNWREMMPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 YLDQLRKDPALLSSEAVLPDLTDELAPVFLLRWFYSASDYISDCWDSIFHNNWREMMPLL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD SLIFSALFILFGTVIVQAFSDSNDERESSPPEKEEAQEKTGKTEPSFTKENSSKIPKKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SLIFSALFILFGTVIVQAFSDSNDERESSPPEKEEAQEKTGKTEPSFTKENSSKIPKKGF
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD VEVTELTDVTYTSNLVRLRPGHMNVVLILSNSTKTSLLQKFALEVYTFTGSSCLHFSFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VEVTELTDVTYTSNLVRLRPGHMNVVLILSNSTKTSLLQKFALEVYTFTGSSCLHFSFLS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD LDKHREWLEYLLEFAQDAAPIPNQYDKHFMERDYTGYVLALNGHKKYFCLFKPQKTVEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 LDKHREWLEYLLEFAQDAAPIPNQYDKHFMERDYTGYVLALNGHKKYFCLFKPQKTVEEE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD EAIGSCSDVDSSLYLGESRGKPSCGLGSRPIKGKLSKLSLWMERLLEGSLQRFYIPSWPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 EAIGSCSDVDSSLYLGESRGKPSCGLGSRPIKGKLSKLSLWMERLLEGSLQRFYIPSWPE
730 740 750 760 770 780
pF1KSD LD
::
CCDS30 LD
>>CCDS72710.1 DNAJC16 gene_id:23341|Hs108|chr1 (470 aa)
initn: 3103 init1: 3103 opt: 3103 Z-score: 3688.9 bits: 692.6 E(32554): 3.8e-199
Smith-Waterman score: 3103; 100.0% identity (100.0% similar) in 470 aa overlap (313-782:1-470)
290 300 310 320 330 340
pF1KSD VPLLYKLTAFAYKDYLSFGYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINRPADVIQA
::::::::::::::::::::::::::::::
CCDS72 MTRRYNINIYAPTLLVFKEHINRPADVIQA
10 20 30
350 360 370 380 390 400
pF1KSD RGMKKQIIDDFITRNKYLLAARLTSQKLFHELCPVKRSHRQRKYCVVLLTAETTKLSKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 RGMKKQIIDDFITRNKYLLAARLTSQKLFHELCPVKRSHRQRKYCVVLLTAETTKLSKPF
40 50 60 70 80 90
410 420 430 440 450 460
pF1KSD EAFLSFALANTQDTVRFVHVYSNRQQEFADTLLPDSEAFQGKSAVSILERRNTAGRVVYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 EAFLSFALANTQDTVRFVHVYSNRQQEFADTLLPDSEAFQGKSAVSILERRNTAGRVVYK
100 110 120 130 140 150
470 480 490 500 510 520
pF1KSD TLEDPWIGSESDKFILLGYLDQLRKDPALLSSEAVLPDLTDELAPVFLLRWFYSASDYIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 TLEDPWIGSESDKFILLGYLDQLRKDPALLSSEAVLPDLTDELAPVFLLRWFYSASDYIS
160 170 180 190 200 210
530 540 550 560 570 580
pF1KSD DCWDSIFHNNWREMMPLLSLIFSALFILFGTVIVQAFSDSNDERESSPPEKEEAQEKTGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 DCWDSIFHNNWREMMPLLSLIFSALFILFGTVIVQAFSDSNDERESSPPEKEEAQEKTGK
220 230 240 250 260 270
590 600 610 620 630 640
pF1KSD TEPSFTKENSSKIPKKGFVEVTELTDVTYTSNLVRLRPGHMNVVLILSNSTKTSLLQKFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 TEPSFTKENSSKIPKKGFVEVTELTDVTYTSNLVRLRPGHMNVVLILSNSTKTSLLQKFA
280 290 300 310 320 330
650 660 670 680 690 700
pF1KSD LEVYTFTGSSCLHFSFLSLDKHREWLEYLLEFAQDAAPIPNQYDKHFMERDYTGYVLALN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 LEVYTFTGSSCLHFSFLSLDKHREWLEYLLEFAQDAAPIPNQYDKHFMERDYTGYVLALN
340 350 360 370 380 390
710 720 730 740 750 760
pF1KSD GHKKYFCLFKPQKTVEEEEAIGSCSDVDSSLYLGESRGKPSCGLGSRPIKGKLSKLSLWM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GHKKYFCLFKPQKTVEEEEAIGSCSDVDSSLYLGESRGKPSCGLGSRPIKGKLSKLSLWM
400 410 420 430 440 450
770 780
pF1KSD ERLLEGSLQRFYIPSWPELD
::::::::::::::::::::
CCDS72 ERLLEGSLQRFYIPSWPELD
460 470
>>CCDS3277.1 DNAJB11 gene_id:51726|Hs108|chr3 (358 aa)
initn: 328 init1: 145 opt: 308 Z-score: 366.4 bits: 77.5 E(32554): 4.3e-14
Smith-Waterman score: 308; 46.4% identity (73.6% similar) in 110 aa overlap (13-121:11-115)
10 20 30 40 50 60
pF1KSD MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDK
:..: :: .... :: :..::: :.:: ::::::.::: . :::.
CCDS32 MAPQNLSTFCLLLLYLIGAVIAGRDF--YKILGVPRSASIKDIKKAYRKLALQLHPDR
10 20 30 40 50
70 80 90 100 110
pF1KSD NKD-PGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQQQQREYRFRHFHENF
: : : :..:: ... :::.::. :::..:: ::. : ..:.:... . : :: .:
CCDS32 NPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGD---IFSHFFGDF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD YFDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYLIKITSDWCFSCIHIEP
:
CCDS32 GFMFGGTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQ
120 130 140 150 160 170
>>CCDS14008.1 DNAJB7 gene_id:150353|Hs108|chr22 (309 aa)
initn: 279 init1: 156 opt: 295 Z-score: 351.9 bits: 74.6 E(32554): 2.8e-13
Smith-Waterman score: 295; 45.8% identity (69.2% similar) in 120 aa overlap (29-139:3-121)
10 20 30 40 50 60
pF1KSD MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDK
: :.:::..: :: ::::::.:.: .:::::
CCDS14 MVDYYEVLGLQRYASPEDIKKAYHKVALKWHPDK
10 20 30
70 80 90 100 110
pF1KSD NKDPG--AEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQQQQREYRFR-H---
: . :: :: ....:::.:::.:::. ::.:: : : : .. ... :: : :
CCDS14 NPENKEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSHFDDECEYGFTFHKPD
40 50 60 70 80 90
120 130 140 150 160 170
pF1KSD --FHENFYFDESF-FHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYLIKITSDWC
:.: :. . : ::: :.. .: ..
CCDS14 DVFKEIFHERDPFSFHF-FEDSLEDLLNRPGSSYGNRNRDAGYFFSTASEYPIFEKFSSY
100 110 120 130 140 150
>>CCDS45400.1 DNAJA3 gene_id:9093|Hs108|chr16 (453 aa)
initn: 291 init1: 154 opt: 285 Z-score: 337.5 bits: 72.5 E(32554): 1.8e-12
Smith-Waterman score: 285; 54.4% identity (82.3% similar) in 79 aa overlap (29-106:93-171)
10 20 30 40 50
pF1KSD MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHP
: :..::: :.::: .::::: .::...::
CCDS45 LRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQLAKKYHP
70 80 90 100 110 120
60 70 80 90 100 110
pF1KSD DKNKD-PGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQQQQREYRFRHFHE
: ::: : :..:: :...:::.::.: ::..:: ::.:: . : . .:.
CCDS45 DTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKGGPTVDP
130 140 150 160 170 180
120 130 140 150 160 170
pF1KSD NFYFDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYLIKITSDWCFSCIHI
CCDS45 EELFRKIFGEFSSSSFGDFQTVFDQPQEYFMELTFNQAAKGVNKEFTVNIMDTCERCNGK
190 200 210 220 230 240
>>CCDS10515.1 DNAJA3 gene_id:9093|Hs108|chr16 (480 aa)
initn: 291 init1: 154 opt: 285 Z-score: 337.2 bits: 72.5 E(32554): 1.8e-12
Smith-Waterman score: 285; 54.4% identity (82.3% similar) in 79 aa overlap (29-106:93-171)
10 20 30 40 50
pF1KSD MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHP
: :..::: :.::: .::::: .::...::
CCDS10 LRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQLAKKYHP
70 80 90 100 110 120
60 70 80 90 100 110
pF1KSD DKNKD-PGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQQQQREYRFRHFHE
: ::: : :..:: :...:::.::.: ::..:: ::.:: . : . .:.
CCDS10 DTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKGGPTVDP
130 140 150 160 170 180
120 130 140 150 160 170
pF1KSD NFYFDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYLIKITSDWCFSCIHI
CCDS10 EELFRKIFGEFSSSSFGDFQTVFDQPQEYFMELTFNQAAKGVNKEFTVNIMDTCERCNGK
190 200 210 220 230 240
>>CCDS5752.1 DNAJB9 gene_id:4189|Hs108|chr7 (223 aa)
initn: 247 init1: 225 opt: 279 Z-score: 335.0 bits: 71.0 E(32554): 2.4e-12
Smith-Waterman score: 279; 38.2% identity (68.4% similar) in 136 aa overlap (12-146:10-141)
10 20 30 40 50 60
pF1KSD MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDK
: : ...: ... : . : .::: ..::. .::::..::: ..::::
CCDS57 MATPQSIFIFAICILMITELILASK-SYYDILGVPKSASERQIKKAFHKLAMKYHPDK
10 20 30 40 50
70 80 90 100 110 120
pF1KSD NKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQQQQREYRFRHFHENFY
::.: :: :: .:..::: ::. ..:..:: : .. ..: : :. :.. ::
CCDS57 NKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG--KGQRGSGSSFEQSF-NFN
60 70 80 90 100 110
130 140 150 160 170
pF1KSD FDESFFHFPFNSERRDSIDEKYLL-HFSHYVNEVVPDSFKKPYLIKITSDWCFSCIHIEP
::. : : : .. ... ..: . ::
CCDS57 FDDLFKDFGFFGQNQNTGSKKRFENHFQTRQDGGSSRQRHHFQEFSFGGGLFDDMFEDME
120 130 140 150 160 170
>>CCDS74613.1 DNAJC10 gene_id:54431|Hs108|chr2 (747 aa)
initn: 266 init1: 143 opt: 283 Z-score: 331.9 bits: 72.2 E(32554): 3.6e-12
Smith-Waterman score: 362; 31.1% identity (61.0% similar) in 254 aa overlap (13-254:19-249)
10 20 30 40 50
pF1KSD MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADIKKAYKKLAR
: :.. . :: . : : : .::::.:::. .:..:.::::
CCDS74 MGVWLNKDDYIRDLKRIILCFLIVYMAILVGTDQDFYSLLGVSKTASSREIRQAFKKLAL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KSD EWHPDKN-KDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAG--ENQGYQKQQQQREYR
. ::::: ..:.:. :..:..:::.:..:. :..::.::. : .::: : .. .
CCDS74 KLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQGGQYES----WN
70 80 90 100 110
120 130 140 150 160 170
pF1KSD FRHFHENFYFDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYLIKITSDWC
. .. ..: :. . .. :::. :. :: . ..... : :
CCDS74 YYRYDFGIYDDDPEI---ITLERRE---------FDAAVNS------GELWFVNFYSPGC
120 130 140 150
180 190 200 210 220 230
pF1KSD FSCIHIEPVWKEVIQELEELGVGIGVVHAGYERRLAHHLGAHSTPSILGIINGKISF-FH
: . :.:.. .:.. : . ::.:. : .: : . :..: ::.. . .: .:
CCDS74 SHCHDLAPTWRDFAKEVDGL-LRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAPVKYH
160 170 180 190 200 210
240 250 260 270 280
pF1KSD NAVVRENLRQF--------VESLLPGNLVEKVTNKNYVRFLSGWQQENKPHVLLFDQTPI
. .:.: .: : : ::.:...
CCDS74 GDRSKESLVSFAMQHVRSTVTELWTGNFVNSIQTAFAAGIGWLITFCSKGGDCLTSQTRL
220 230 240 250 260 270
290 300 310 320 330 340
pF1KSD VPLLYKLTAFAYKDYLSFGYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINRPADVIQA
CCDS74 RLSGMLFLNSLDAKEIYLEVIHNLPDFELLSANTLEDRLAHHRWLLFFHFGKNENSNDPE
280 290 300 310 320 330
>>CCDS33345.1 DNAJC10 gene_id:54431|Hs108|chr2 (793 aa)
initn: 266 init1: 143 opt: 283 Z-score: 331.6 bits: 72.2 E(32554): 3.8e-12
Smith-Waterman score: 362; 31.1% identity (61.0% similar) in 254 aa overlap (13-254:19-249)
10 20 30 40 50
pF1KSD MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADIKKAYKKLAR
: :.. . :: . : : : .::::.:::. .:..:.::::
CCDS33 MGVWLNKDDYIRDLKRIILCFLIVYMAILVGTDQDFYSLLGVSKTASSREIRQAFKKLAL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KSD EWHPDKN-KDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAG--ENQGYQKQQQQREYR
. ::::: ..:.:. :..:..:::.:..:. :..::.::. : .::: : .. .
CCDS33 KLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQGGQYES----WN
70 80 90 100 110
120 130 140 150 160 170
pF1KSD FRHFHENFYFDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYLIKITSDWC
. .. ..: :. . .. :::. :. :: . ..... : :
CCDS33 YYRYDFGIYDDDPEI---ITLERRE---------FDAAVNS------GELWFVNFYSPGC
120 130 140 150
180 190 200 210 220 230
pF1KSD FSCIHIEPVWKEVIQELEELGVGIGVVHAGYERRLAHHLGAHSTPSILGIINGKISF-FH
: . :.:.. .:.. : . ::.:. : .: : . :..: ::.. . .: .:
CCDS33 SHCHDLAPTWRDFAKEVDGL-LRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAPVKYH
160 170 180 190 200 210
240 250 260 270 280
pF1KSD NAVVRENLRQF--------VESLLPGNLVEKVTNKNYVRFLSGWQQENKPHVLLFDQTPI
. .:.: .: : : ::.:...
CCDS33 GDRSKESLVSFAMQHVRSTVTELWTGNFVNSIQTAFAAGIGWLITFCSKGGDCLTSQTRL
220 230 240 250 260 270
290 300 310 320 330 340
pF1KSD VPLLYKLTAFAYKDYLSFGYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINRPADVIQA
CCDS33 RLSGMLDGLVNVGWMDCATQDNLCKSLDITTSTTAYFPPGATLNNKEKNSILFLNSLDAK
280 290 300 310 320 330
>>CCDS7316.2 DNAJB12 gene_id:54788|Hs108|chr10 (409 aa)
initn: 307 init1: 268 opt: 277 Z-score: 328.7 bits: 70.7 E(32554): 5.5e-12
Smith-Waterman score: 277; 46.2% identity (69.8% similar) in 106 aa overlap (29-130:144-242)
10 20 30 40 50
pF1KSD MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHP
: :..::::: ::. :.::::..:: ..::
CCDS73 PSANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRGASDEDLKKAYRRLALKFHP
120 130 140 150 160 170
60 70 80 90 100 110
pF1KSD DKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQQQQRE-YRFRHFHE
:::. ::: . : :. :: .::: :::..:::.:: .:.: :. . ::.
CCDS73 DKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGD-------DKSQAARHGHGHGDFHR
180 190 200 210 220
120 130 140 150 160 170
pF1KSD NFYFD---ESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYLIKITSDWCFSC
.: : :..:.. :
CCDS73 GFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTYQQRQDRRDNQGDGGLGVFVQLMP
230 240 250 260 270 280
782 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 04:26:16 2016 done: Thu Nov 3 04:26:17 2016
Total Scan time: 3.730 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]