Result of FASTA (ccds) for
pF1KSDA0895
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0895, 469 aa
1>>>pF1KSDA0895 469 - 469 aa - 469 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1195+/-0.000956; mu= 13.6962+/- 0.058
mean_var=81.0452+/-15.920, 0's: 0 Z-trim(106.3): 20 B-trim: 0 in 0/48
Lambda= 0.142466
statistics sampled from 8870 (8883) to 8870 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.273), width: 16
Scan time: 3.150
The best scores are: opt bits E(32554)
CCDS47573.1 KIAA0895 gene_id:23366|Hs108|chr7 ( 469) 3153 658.0 6.2e-189
CCDS43570.1 KIAA0895 gene_id:23366|Hs108|chr7 ( 520) 3110 649.1 3.1e-186
CCDS56483.1 KIAA0895 gene_id:23366|Hs108|chr7 ( 507) 3107 648.5 4.6e-186
CCDS75583.1 KIAA0895 gene_id:23366|Hs108|chr7 ( 275) 1592 337.0 1.5e-92
CCDS56482.1 KIAA0895 gene_id:23366|Hs108|chr7 ( 417) 1592 337.1 2.1e-92
CCDS56484.1 KIAA0895 gene_id:23366|Hs108|chr7 ( 517) 1592 337.1 2.6e-92
CCDS42177.1 KIAA0895L gene_id:653319|Hs108|chr16 ( 471) 1060 227.8 2e-59
>>CCDS47573.1 KIAA0895 gene_id:23366|Hs108|chr7 (469 aa)
initn: 3153 init1: 3153 opt: 3153 Z-score: 3505.5 bits: 658.0 E(32554): 6.2e-189
Smith-Waterman score: 3153; 99.8% identity (100.0% similar) in 469 aa overlap (1-469:1-469)
10 20 30 40 50 60
pF1KSD MLESIRVTEKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MLESIRVTEKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LQSKEKKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRP
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LQSKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD AVFVTSSVSSPVKFTHDISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AVFVTSSVSSPVKFTHDISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SGKKFCILTAIKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SGKKFCILTAIKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQIV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VHLTEDLLSRASMTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VHLTEDLLSRASMTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSW
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD TGRKKHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TGRKKHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGRF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD VKDPNTRWDYCVRAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VKDPNTRWDYCVRAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVSY
370 380 390 400 410 420
430 440 450 460
pF1KSD EDVDRLKGLAVTENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EDVDRLKGLAVTENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI
430 440 450 460
>>CCDS43570.1 KIAA0895 gene_id:23366|Hs108|chr7 (520 aa)
initn: 3110 init1: 3110 opt: 3110 Z-score: 3457.0 bits: 649.1 E(32554): 3.1e-186
Smith-Waterman score: 3110; 99.6% identity (100.0% similar) in 462 aa overlap (8-469:59-520)
10 20 30
pF1KSD MLESIRVTEKLHWPEQELAKKSILNAEDSLIIDNKRS
.:::::::::::::::::::::::::::::
CCDS43 WFKFRKRKGEKRPRPNHKAVARRAKLKFSTSEKLHWPEQELAKKSILNAEDSLIIDNKRS
30 40 50 60 70 80
40 50 60 70 80 90
pF1KSD ISHLSSGVLKDIFTTGTSSYNVLLQSKEKKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKD
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
CCDS43 ISHLSSGVLKDIFTTGTSSYNVLLQSKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKD
90 100 110 120 130 140
100 110 120 130 140 150
pF1KSD PRRMKALVPVTSSGTWYCLERRPAVFVTSSVSSPVKFTHDISVTGNGIVLPPKPKSKVKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PRRMKALVPVTSSGTWYCLERRPAVFVTSSVSSPVKFTHDISVTGNGIVLPPKPKSKVKW
150 160 170 180 190 200
160 170 180 190 200 210
pF1KSD CHFSTLPKPKPQLSRSFEKGDDFSGKKFCILTAIKPTNLEKEKLRFFKSDYTYNPQFEYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CHFSTLPKPKPQLSRSFEKGDDFSGKKFCILTAIKPTNLEKEKLRFFKSDYTYNPQFEYA
210 220 230 240 250 260
220 230 240 250 260 270
pF1KSD NPALPSVLAKHSHASDRFLKQIVVHLTEDLLSRASMTVVNGCPTLTINVSTAREHWLEGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NPALPSVLAKHSHASDRFLKQIVVHLTEDLLSRASMTVVNGCPTLTINVSTAREHWLEGM
270 280 290 300 310 320
280 290 300 310 320 330
pF1KSD LRHEIGTHYFRGINNLQQPWNSWTGRKKHELKPNNPTEEGLASIHSVLFRKDPFLWRAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LRHEIGTHYFRGINNLQQPWNSWTGRKKHELKPNNPTEEGLASIHSVLFRKDPFLWRAAL
330 340 350 360 370 380
340 350 360 370 380 390
pF1KSD LYYTVYQASQMSFCELFKDIGRFVKDPNTRWDYCVRAKRGWTDTSQPGCFSKDQVYLDGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LYYTVYQASQMSFCELFKDIGRFVKDPNTRWDYCVRAKRGWTDTSQPGCFSKDQVYLDGI
390 400 410 420 430 440
400 410 420 430 440 450
pF1KSD LQILRYRDTIDFHLLTALGKVSYEDVDRLKGLAVTENMRVPHFLQDHGRYMEHLEKIMEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LQILRYRDTIDFHLLTALGKVSYEDVDRLKGLAVTENMRVPHFLQDHGRYMEHLEKIMEV
450 460 470 480 490 500
460
pF1KSD NELTDRELKDLI
::::::::::::
CCDS43 NELTDRELKDLI
510 520
>>CCDS56483.1 KIAA0895 gene_id:23366|Hs108|chr7 (507 aa)
initn: 3106 init1: 3106 opt: 3107 Z-score: 3453.8 bits: 648.5 E(32554): 4.6e-186
Smith-Waterman score: 3107; 98.3% identity (99.4% similar) in 469 aa overlap (1-469:40-507)
10 20 30
pF1KSD MLESIRVTEKLHWPEQELAKKSILNAEDSL
.: :. . .:::::::::::::::::::::
CCDS56 SGLHPAPRPLRGAQEALAKNLWREERNRPLILSSL-IIKKLHWPEQELAKKSILNAEDSL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KSD IIDNKRSISHLSSGVLKDIFTTGTSSYNVLLQSKEKKKYHSQKQSSSTYSKRCRKPSKSP
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
CCDS56 IIDNKRSISHLSSGVLKDIFTTGTSSYNVLLQSKEEKKYHSQKQSSSTYSKRCRKPSKSP
70 80 90 100 110 120
100 110 120 130 140 150
pF1KSD NTSRSKDPRRMKALVPVTSSGTWYCLERRPAVFVTSSVSSPVKFTHDISVTGNGIVLPPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 NTSRSKDPRRMKALVPVTSSGTWYCLERRPAVFVTSSVSSPVKFTHDISVTGNGIVLPPK
130 140 150 160 170 180
160 170 180 190 200 210
pF1KSD PKSKVKWCHFSTLPKPKPQLSRSFEKGDDFSGKKFCILTAIKPTNLEKEKLRFFKSDYTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PKSKVKWCHFSTLPKPKPQLSRSFEKGDDFSGKKFCILTAIKPTNLEKEKLRFFKSDYTY
190 200 210 220 230 240
220 230 240 250 260 270
pF1KSD NPQFEYANPALPSVLAKHSHASDRFLKQIVVHLTEDLLSRASMTVVNGCPTLTINVSTAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 NPQFEYANPALPSVLAKHSHASDRFLKQIVVHLTEDLLSRASMTVVNGCPTLTINVSTAR
250 260 270 280 290 300
280 290 300 310 320 330
pF1KSD EHWLEGMLRHEIGTHYFRGINNLQQPWNSWTGRKKHELKPNNPTEEGLASIHSVLFRKDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EHWLEGMLRHEIGTHYFRGINNLQQPWNSWTGRKKHELKPNNPTEEGLASIHSVLFRKDP
310 320 330 340 350 360
340 350 360 370 380 390
pF1KSD FLWRAALLYYTVYQASQMSFCELFKDIGRFVKDPNTRWDYCVRAKRGWTDTSQPGCFSKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FLWRAALLYYTVYQASQMSFCELFKDIGRFVKDPNTRWDYCVRAKRGWTDTSQPGCFSKD
370 380 390 400 410 420
400 410 420 430 440 450
pF1KSD QVYLDGILQILRYRDTIDFHLLTALGKVSYEDVDRLKGLAVTENMRVPHFLQDHGRYMEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QVYLDGILQILRYRDTIDFHLLTALGKVSYEDVDRLKGLAVTENMRVPHFLQDHGRYMEH
430 440 450 460 470 480
460
pF1KSD LEKIMEVNELTDRELKDLI
:::::::::::::::::::
CCDS56 LEKIMEVNELTDRELKDLI
490 500
>>CCDS75583.1 KIAA0895 gene_id:23366|Hs108|chr7 (275 aa)
initn: 1589 init1: 1589 opt: 1592 Z-score: 1775.1 bits: 337.0 E(32554): 1.5e-92
Smith-Waterman score: 1592; 89.3% identity (92.6% similar) in 270 aa overlap (208-469:8-275)
180 190 200 210 220 230
pF1KSD DDFSGKKFCILTAIKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKH---SHASDR
: .:: :. . :.:.: ::.
CCDS75 MELTLQKYGSYEKFEQATGG--SLLSKTRIWSHVRKY
10 20 30
240 250 260 270 280
pF1KSD FLKQ-----IVVHLTEDLLSRASMTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRG
..:. :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MMKEGCLGEIVVHLTEDLLSRASMTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRG
40 50 60 70 80 90
290 300 310 320 330 340
pF1KSD INNLQQPWNSWTGRKKHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 INNLQQPWNSWTGRKKHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMS
100 110 120 130 140 150
350 360 370 380 390 400
pF1KSD FCELFKDIGRFVKDPNTRWDYCVRAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 FCELFKDIGRFVKDPNTRWDYCVRAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDF
160 170 180 190 200 210
410 420 430 440 450 460
pF1KSD HLLTALGKVSYEDVDRLKGLAVTENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 HLLTALGKVSYEDVDRLKGLAVTENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI
220 230 240 250 260 270
>>CCDS56482.1 KIAA0895 gene_id:23366|Hs108|chr7 (417 aa)
initn: 1589 init1: 1589 opt: 1592 Z-score: 1772.3 bits: 337.1 E(32554): 2.1e-92
Smith-Waterman score: 2417; 88.5% identity (88.5% similar) in 417 aa overlap (101-469:1-417)
80 90 100 110 120 130
pF1KSD SQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRPAVFVTSSVSS
::::::::::::::::::::::::::::::
CCDS56 MKALVPVTSSGTWYCLERRPAVFVTSSVSS
10 20 30
140 150 160 170 180 190
pF1KSD PVKFTHDISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDFSGKKFCILTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PVKFTHDISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDFSGKKFCILTA
40 50 60 70 80 90
200 210 220 230
pF1KSD IKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQ------------
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 IKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQSINIMELTLQKY
100 110 120 130 140 150
240 250 260
pF1KSD ------------------------------------IVVHLTEDLLSRASMTVVNGCPTL
::::::::::::::::::::::::
CCDS56 GSYEKFEQATGGSLLSKTRIWSHVRKYMMKEGCLGEIVVHLTEDLLSRASMTVVNGCPTL
160 170 180 190 200 210
270 280 290 300 310 320
pF1KSD TINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSWTGRKKHELKPNNPTEEGLASIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSWTGRKKHELKPNNPTEEGLASIH
220 230 240 250 260 270
330 340 350 360 370 380
pF1KSD SVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGRFVKDPNTRWDYCVRAKRGWTDTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGRFVKDPNTRWDYCVRAKRGWTDTS
280 290 300 310 320 330
390 400 410 420 430 440
pF1KSD QPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVSYEDVDRLKGLAVTENMRVPHFLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVSYEDVDRLKGLAVTENMRVPHFLQ
340 350 360 370 380 390
450 460
pF1KSD DHGRYMEHLEKIMEVNELTDRELKDLI
:::::::::::::::::::::::::::
CCDS56 DHGRYMEHLEKIMEVNELTDRELKDLI
400 410
>>CCDS56484.1 KIAA0895 gene_id:23366|Hs108|chr7 (517 aa)
initn: 1589 init1: 1589 opt: 1592 Z-score: 1770.8 bits: 337.1 E(32554): 2.6e-92
Smith-Waterman score: 2937; 90.2% identity (90.4% similar) in 501 aa overlap (17-469:17-517)
10 20 30 40 50 60
pF1KSD MLESIRVTEKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVL
::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MLESIRVTEKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LQSKEKKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRP
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LQSKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD AVFVTSSVSSPVKFTHDISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AVFVTSSVSSPVKFTHDISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDF
130 140 150 160 170 180
190 200 210 220 230
pF1KSD SGKKFCILTAIKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQ--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SGKKFCILTAIKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQSI
190 200 210 220 230 240
240 250
pF1KSD ----------------------------------------------IVVHLTEDLLSRAS
::::::::::::::
CCDS56 NIMELTLQKYGSYEKFEQATGGSLLSKTRIWSHVRKYMMKEGCLGEIVVHLTEDLLSRAS
250 260 270 280 290 300
260 270 280 290 300 310
pF1KSD MTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSWTGRKKHELKPNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSWTGRKKHELKPNN
310 320 330 340 350 360
320 330 340 350 360 370
pF1KSD PTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGRFVKDPNTRWDYCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGRFVKDPNTRWDYCV
370 380 390 400 410 420
380 390 400 410 420 430
pF1KSD RAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVSYEDVDRLKGLAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVSYEDVDRLKGLAVT
430 440 450 460 470 480
440 450 460
pF1KSD ENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI
:::::::::::::::::::::::::::::::::::::
CCDS56 ENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI
490 500 510
>>CCDS42177.1 KIAA0895L gene_id:653319|Hs108|chr16 (471 aa)
initn: 1218 init1: 1054 opt: 1060 Z-score: 1180.5 bits: 227.8 E(32554): 2e-59
Smith-Waterman score: 1171; 51.7% identity (74.3% similar) in 350 aa overlap (168-469:120-469)
140 150 160 170 180 190
pF1KSD ISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDFSGKKFCILTAIKPTNLE
:..... . . ...:. :.:.:..:::..
CCDS42 GRRGRGTLGRPPPGRGRNPGGGTLRPAASLPHIAKTQRDAGHIASKSPCMLVALRPTNMD
90 100 110 120 130 140
200 210 220 230
pF1KSD KEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQ-------------------
.:. .::.: ::::::::: .: .:: :. .:: .:..:
CCDS42 RERDKFFQSHYTYNPQFEYQEPMPTAVLEKYCEASGQFIHQAVGIIEAVLEKFGTYEHFE
150 160 170 180 190 200
240 250 260
pF1KSD -----------------------------IVVHLTEDLLSRASMTVVNGCPTLTINVSTA
.::.:.:::::.: : : :. :::.::.. :
CCDS42 AATGGQLLTKCQIWSIVRKYMQKEGCAGEVVVQLSEDLLSQAVMMVENSRPTLAINLTGA
210 220 230 240 250 260
270 280 290 300 310 320
pF1KSD REHWLEGMLRHEIGTHYFRGINNLQQPWNSWTGRKKHELKPNNPTEEGLASIHSVLFRKD
:..::::::::::::::.::.:: .:::.. :: .. :.: :::::::::.:::::::.
CCDS42 RQYWLEGMLRHEIGTHYLRGVNNARQPWHNAEGRLRYGLRPANPTEEGLASLHSVLFRKQ
270 280 290 300 310 320
330 340 350 360 370 380
pF1KSD PFLWRAALLYYTVYQASQMSFCELFKDIGRFVKDPNTRWDYCVRAKRGWTDTSQPGCFSK
::::::::::::...:..::: .::.:. :.:.: ..::.:::::::: :::: ::::::
CCDS42 PFLWRAALLYYTIHRAARMSFRQLFQDLERYVQDADVRWEYCVRAKRGQTDTSLPGCFSK
330 340 350 360 370 380
390 400 410 420 430 440
pF1KSD DQVYLDGILQILRYRDTIDFHLLTALGKVSYEDVDRLKGLAVTENMRVPHFLQDHGRYME
::::::::..:::.:.:::: :::.::::::::::.:. .: .: :::::.:: .:: .
CCDS42 DQVYLDGIVRILRHRQTIDFPLLTSLGKVSYEDVDHLRPHGVLDNTRVPHFMQDLARYRQ
390 400 410 420 430 440
450 460
pF1KSD HLEKIMEVNELTDRELKDLI
.::.:: .:.: . :: :.
CCDS42 QLEHIMATNRLDEAELGRLLPD
450 460 470
469 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 04:01:01 2016 done: Thu Nov 3 04:01:02 2016
Total Scan time: 3.150 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]