Result of FASTA (ccds) for
pF1KSDA0891
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0891, 1318 aa
1>>>pF1KSDA0891 1318 - 1318 aa - 1318 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8734+/-0.000952; mu= 11.4397+/- 0.057
mean_var=148.9079+/-30.883, 0's: 0 Z-trim(111.3): 105 B-trim: 232 in 1/51
Lambda= 0.105103
statistics sampled from 12146 (12254) to 12146 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.712), E-opt: 0.2 (0.376), width: 16
Scan time: 5.940
The best scores are: opt bits E(32554)
CCDS43090.1 USP19 gene_id:10869|Hs108|chr3 (1318) 9002 1377.6 0
CCDS56254.1 USP19 gene_id:10869|Hs108|chr3 (1419) 7664 1174.8 0
CCDS56256.1 USP19 gene_id:10869|Hs108|chr3 (1372) 7130 1093.8 0
CCDS56255.1 USP19 gene_id:10869|Hs108|chr3 (1384) 7116 1091.7 0
CCDS2793.1 USP4 gene_id:7375|Hs108|chr3 ( 963) 948 156.3 3.6e-37
CCDS2794.1 USP4 gene_id:7375|Hs108|chr3 ( 916) 947 156.2 3.8e-37
CCDS14277.1 USP11 gene_id:8237|Hs108|chrX ( 963) 886 146.9 2.4e-34
CCDS8963.1 USP15 gene_id:9958|Hs108|chr12 ( 952) 881 146.2 4.1e-34
CCDS58251.1 USP15 gene_id:9958|Hs108|chr12 ( 981) 881 146.2 4.2e-34
CCDS32697.1 USP32 gene_id:84669|Hs108|chr17 (1604) 686 116.7 5e-25
CCDS11069.2 USP6 gene_id:9098|Hs108|chr17 (1406) 678 115.5 1e-24
CCDS61632.1 USP8 gene_id:9101|Hs108|chr15 (1012) 630 108.1 1.2e-22
CCDS10137.1 USP8 gene_id:9101|Hs108|chr15 (1118) 630 108.1 1.3e-22
CCDS8423.1 USP2 gene_id:9099|Hs108|chr11 ( 396) 523 91.7 4.3e-18
CCDS58189.1 USP2 gene_id:9099|Hs108|chr11 ( 362) 515 90.4 9.3e-18
CCDS8422.1 USP2 gene_id:9099|Hs108|chr11 ( 605) 511 89.9 2.2e-17
>>CCDS43090.1 USP19 gene_id:10869|Hs108|chr3 (1318 aa)
initn: 9002 init1: 9002 opt: 9002 Z-score: 7378.9 bits: 1377.6 E(32554): 0
Smith-Waterman score: 9002; 100.0% identity (100.0% similar) in 1318 aa overlap (1-1318:1-1318)
10 20 30 40 50 60
pF1KSD MSGGASATGPRRGPPGLEDTTSKKKQKDRANQESKDGDPRKETGSRYVAQAGLEPLASGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MSGGASATGPRRGPPGLEDTTSKKKQKDRANQESKDGDPRKETGSRYVAQAGLEPLASGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSASASHAAGITGSRHRTRLFFPSSSGSASTPQEEQTKEGACEDPHDLLATPTPELLLDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PSASASHAAGITGSRHRTRLFFPSSSGSASTPQEEQTKEGACEDPHDLLATPTPELLLDW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RQSAEEVIVKLRVGVGPLQLEDVDAAFTDTDCVVRFAGGQQWGGVFYAEIKSSCAKVQTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RQSAEEVIVKLRVGVGPLQLEDVDAAFTDTDCVVRFAGGQQWGGVFYAEIKSSCAKVQTR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD KGSLLHLTLPKKVPMLTWPSLLVEADEQLCIPPLNSQTCLLGSEENLAPLAGEKAVPPGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KGSLLHLTLPKKVPMLTWPSLLVEADEQLCIPPLNSQTCLLGSEENLAPLAGEKAVPPGN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD DPVSPAMVRSRNPGKDDCAKEEMAVAADAATLVDEPESMVNLAFVKNDSYEKGPDSVVVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DPVSPAMVRSRNPGKDDCAKEEMAVAADAATLVDEPESMVNLAFVKNDSYEKGPDSVVVH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD VYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FCFTASRIDICLRKRQSQRWGGLEAPAARVGGAKVAVPTGPTPLDSTPPGGAPHPLTGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FCFTASRIDICLRKRQSQRWGGLEAPAARVGGAKVAVPTGPTPLDSTPPGGAPHPLTGQE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD EARAVEKDKSKARSEDTGLDSVATRTPMEHVTPKPETHLASPKPTCMVPPMPHSPVSGDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EARAVEKDKSKARSEDTGLDSVATRTPMEHVTPKPETHLASPKPTCMVPPMPHSPVSGDS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD HEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD KVSITFDPFLYLPVPLPQKQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KVSITFDPFLYLPVPLPQKQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD VHVKPENLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VHVKPENLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQR
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD PQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRPENIGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRPENIGY
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD PFLVSVPASRLTYARLAQLLEGYARYSVSVFQPPFQPGRMALESQSPGCTTLLSTGSLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PFLVSVPASRLTYARLAQLLEGYARYSVSVFQPPFQPGRMALESQSPGCTTLLSTGSLEA
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD GDSERDPIQPPELQLVTPMAEGDTGLPRVWAAPDRGPVPSTSGISSEMLASGPIEVGSLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GDSERDPIQPPELQLVTPMAEGDTGLPRVWAAPDRGPVPSTSGISSEMLASGPIEVGSLP
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD AGERVSRPEAAVPGYQHPSEAMNAHTPQFFIYKIDSSNREQRLEDKGDTPLELGDDCSLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AGERVSRPEAAVPGYQHPSEAMNAHTPQFFIYKIDSSNREQRLEDKGDTPLELGDDCSLA
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD LVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWY
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD CPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIG
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KSD QKEEQLPSYDLYAVINHYGGMIGGHYTACARLPNDRSSQRSDVGWRLFDDSTVTTVDESQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QKEEQLPSYDLYAVINHYGGMIGGHYTACARLPNDRSSQRSDVGWRLFDDSTVTTVDESQ
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KSD VVTRYAYVLFYRRRNSPVERPPRAGHSEHHPDLGPAAEAAASQASRIWQELEAEEEPVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VVTRYAYVLFYRRRNSPVERPPRAGHSEHHPDLGPAAEAAASQASRIWQELEAEEEPVPE
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310
pF1KSD GSGPLGPWGPQDWVGPLPRGPTTPDEGCLRYFVLGTVAALVALVLNVFYPLVSQSRWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GSGPLGPWGPQDWVGPLPRGPTTPDEGCLRYFVLGTVAALVALVLNVFYPLVSQSRWR
1270 1280 1290 1300 1310
>>CCDS56254.1 USP19 gene_id:10869|Hs108|chr3 (1419 aa)
initn: 7658 init1: 7658 opt: 7664 Z-score: 6281.9 bits: 1174.8 E(32554): 0
Smith-Waterman score: 8335; 92.5% identity (92.5% similar) in 1350 aa overlap (70-1318:70-1419)
40 50 60 70 80 90
pF1KSD RKETGSRYVAQAGLEPLASGDPSASASHAAGITGSRHRTRLFFPSSSGSASTPQEEQTKE
::::::::::::::::::::::::::::::
CCDS56 RKETGSRYVAQAGLEPLASGDPSASASHAAGITGSRHRTRLFFPSSSGSASTPQEEQTKE
40 50 60 70 80 90
100 110 120 130 140 150
pF1KSD GACEDPHDLLATPTPELLLDWRQSAEEVIVKLRVGVGPLQLEDVDAAFTDTDCVVRFAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GACEDPHDLLATPTPELLLDWRQSAEEVIVKLRVGVGPLQLEDVDAAFTDTDCVVRFAGG
100 110 120 130 140 150
160 170 180 190 200
pF1KSD QQWGGVFYAEIKSSCAKVQTRKGSLLHLTLPKKVPMLTWPSLL-----------------
:::::::::::::::::::::::::::::::::::::::::::
CCDS56 QQWGGVFYAEIKSSCAKVQTRKGSLLHLTLPKKVPMLTWPSLLKKPLGTQELVPGLRCQE
160 170 180 190 200 210
pF1KSD ------------------------------------------------------------
CCDS56 NGQELSPIALEPGPEPHRAKQEARNQKRAQGRGEVGAGAGPGAQAGPSAKRAVHLCRGPE
220 230 240 250 260 270
210 220 230
pF1KSD ------------------------VEADEQLCIPPLNSQTCLLGSEENLAPLAGEKAVPP
::::::::::::::::::::::::::::::::::::
CCDS56 GDGSRDDPGPRGDAPPFVADPATQVEADEQLCIPPLNSQTCLLGSEENLAPLAGEKAVPP
280 290 300 310 320 330
240 250 260 270 280 290
pF1KSD GNDPVSPAMVRSRNPGKDDCAKEEMAVAADAATLVDEPESMVNLAFVKNDSYEKGPDSVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GNDPVSPAMVRSRNPGKDDCAKEEMAVAADAATLVDEPESMVNLAFVKNDSYEKGPDSVV
340 350 360 370 380 390
300 310 320 330 340 350
pF1KSD VHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQ
400 410 420 430 440 450
360 370 380 390 400 410
pF1KSD CTFCFTASRIDICLRKRQSQRWGGLEAPAARVGGAKVAVPTGPTPLDSTPPGGAPHPLTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 CTFCFTASRIDICLRKRQSQRWGGLEAPAARVGGAKVAVPTGPTPLDSTPPGGAPHPLTG
460 470 480 490 500 510
420 430 440 450 460 470
pF1KSD QEEARAVEKDKSKARSEDTGLDSVATRTPMEHVTPKPETHLASPKPTCMVPPMPHSPVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QEEARAVEKDKSKARSEDTGLDSVATRTPMEHVTPKPETHLASPKPTCMVPPMPHSPVSG
520 530 540 550 560 570
480 490 500 510 520 530
pF1KSD DSVEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DSVEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNN
580 590 600 610 620 630
540 550 560 570 580 590
pF1KSD PLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLD
640 650 660 670 680 690
600 610 620 630 640 650
pF1KSD GLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPV
700 710 720 730 740 750
660 670 680 690 700 710
pF1KSD CAKVSITFDPFLYLPVPLPQKQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 CAKVSITFDPFLYLPVPLPQKQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLS
760 770 780 790 800 810
720 730 740 750 760 770
pF1KSD QSVHVKPENLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QSVHVKPENLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQ
820 830 840 850 860 870
780 790 800 810 820 830
pF1KSD QRPQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRPENI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QRPQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRPENI
880 890 900 910 920 930
840 850 860 870 880 890
pF1KSD GYPFLVSVPASRLTYARLAQLLEGYARYSVSVFQPPFQPGRMALESQSPGCTTLLSTGSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GYPFLVSVPASRLTYARLAQLLEGYARYSVSVFQPPFQPGRMALESQSPGCTTLLSTGSL
940 950 960 970 980 990
900 910 920 930 940 950
pF1KSD EAGDSERDPIQPPELQLVTPMAEGDTGLPRVWAAPDRGPVPSTSGISSEMLASGPIEVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EAGDSERDPIQPPELQLVTPMAEGDTGLPRVWAAPDRGPVPSTSGISSEMLASGPIEVGS
1000 1010 1020 1030 1040 1050
960 970 980 990 1000 1010
pF1KSD LPAGERVSRPEAAVPGYQHPSEAMNAHTPQFFIYKIDSSNREQRLEDKGDTPLELGDDCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LPAGERVSRPEAAVPGYQHPSEAMNAHTPQFFIYKIDSSNREQRLEDKGDTPLELGDDCS
1060 1070 1080 1090 1100 1110
1020 1030 1040 1050 1060 1070
pF1KSD LALVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LALVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEA
1120 1130 1140 1150 1160 1170
1080 1090 1100 1110 1120 1130
pF1KSD WYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 WYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFC
1180 1190 1200 1210 1220 1230
1140 1150 1160 1170 1180 1190
pF1KSD IGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPNDRSSQRSDVGWRLFDDSTVTTVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 IGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPNDRSSQRSDVGWRLFDDSTVTTVDE
1240 1250 1260 1270 1280 1290
1200 1210 1220 1230 1240 1250
pF1KSD SQVVTRYAYVLFYRRRNSPVERPPRAGHSEHHPDLGPAAEAAASQASRIWQELEAEEEPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SQVVTRYAYVLFYRRRNSPVERPPRAGHSEHHPDLGPAAEAAASQASRIWQELEAEEEPV
1300 1310 1320 1330 1340 1350
1260 1270 1280 1290 1300 1310
pF1KSD PEGSGPLGPWGPQDWVGPLPRGPTTPDEGCLRYFVLGTVAALVALVLNVFYPLVSQSRWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PEGSGPLGPWGPQDWVGPLPRGPTTPDEGCLRYFVLGTVAALVALVLNVFYPLVSQSRWR
1360 1370 1380 1390 1400 1410
>--
initn: 455 init1: 455 opt: 455 Z-score: 374.3 bits: 81.7 E(32554): 1.6e-14
Smith-Waterman score: 455; 100.0% identity (100.0% similar) in 69 aa overlap (1-69:1-69)
10 20 30 40 50 60
pF1KSD MSGGASATGPRRGPPGLEDTTSKKKQKDRANQESKDGDPRKETGSRYVAQAGLEPLASGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MSGGASATGPRRGPPGLEDTTSKKKQKDRANQESKDGDPRKETGSRYVAQAGLEPLASGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSASASHAAGITGSRHRTRLFFPSSSGSASTPQEEQTKEGACEDPHDLLATPTPELLLDW
:::::::::
CCDS56 PSASASHAAGITGSRHRTRLFFPSSSGSASTPQEEQTKEGACEDPHDLLATPTPELLLDW
70 80 90 100 110 120
>>CCDS56256.1 USP19 gene_id:10869|Hs108|chr3 (1372 aa)
initn: 8384 init1: 7118 opt: 7130 Z-score: 5844.6 bits: 1093.8 E(32554): 0
Smith-Waterman score: 7823; 91.1% identity (91.8% similar) in 1297 aa overlap (60-1264:60-1356)
30 40 50 60 70 80
pF1KSD ANQESKDGDPRKETGSRYVAQAGLEPLASGDPSASASHAAGITGSRHRTRLFFPSSSGSA
::::::::::::::::::::::::::::::
CCDS56 ANQESKDGDPRKETGSRYVAQAGLEPLASGDPSASASHAAGITGSRHRTRLFFPSSSGSA
30 40 50 60 70 80
90 100 110 120 130 140
pF1KSD STPQEEQTKEGACEDPHDLLATPTPELLLDWRQSAEEVIVKLRVGVGPLQLEDVDAAFTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 STPQEEQTKEGACEDPHDLLATPTPELLLDWRQSAEEVIVKLRVGVGPLQLEDVDAAFTD
90 100 110 120 130 140
150 160 170 180 190
pF1KSD TDCVVRFAGGQQWGGVFYAEIKSSCAKVQTRKGSLLHLTLPKKV----------------
:::::::::::::::::::::::::::::::::::::::::::
CCDS56 TDCVVRFAGGQQWGGVFYAEIKSSCAKVQTRKGSLLHLTLPKKKKPLGTQELVPGLRCQE
150 160 170 180 190 200
pF1KSD ------------------------------------------------------------
CCDS56 NGQELSPIALEPGPEPHRAKQEARNQKRAQGRGEVGAGAGPGAQAGPSAKRAVHLCRGPE
210 220 230 240 250 260
200 210 220 230
pF1KSD ---------------PMLTWPSLLVEADEQLCIPPLNSQTCLLGSEENLAPLAGEKAVPP
:... :. ::::::::::::::::::::::::::::::::::::
CCDS56 GDGSRDDPGPRGDAPPFVADPATQVEADEQLCIPPLNSQTCLLGSEENLAPLAGEKAVPP
270 280 290 300 310 320
240 250 260 270 280 290
pF1KSD GNDPVSPAMVRSRNPGKDDCAKEEMAVAADAATLVDEPESMVNLAFVKNDSYEKGPDSVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GNDPVSPAMVRSRNPGKDDCAKEEMAVAADAATLVDEPESMVNLAFVKNDSYEKGPDSVV
330 340 350 360 370 380
300 310 320 330 340 350
pF1KSD VHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQ
390 400 410 420 430 440
360 370 380 390 400 410
pF1KSD CTFCFTASRIDICLRKRQSQRWGGLEAPAARVGGAKVAVPTGPTPLDSTPPGGAPHPLTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 CTFCFTASRIDICLRKRQSQRWGGLEAPAARVGGAKVAVPTGPTPLDSTPPGGAPHPLTG
450 460 470 480 490 500
420 430 440 450 460 470
pF1KSD QEEARAVEKDKSKARSEDTGLDSVATRTPMEHVTPKPETHLASPKPTCMVPPMPHSPVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QEEARAVEKDKSKARSEDTGLDSVATRTPMEHVTPKPETHLASPKPTCMVPPMPHSPVSG
510 520 530 540 550 560
480 490 500 510 520 530
pF1KSD DSVEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DSVEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNN
570 580 590 600 610 620
540 550 560 570 580 590
pF1KSD PLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLD
630 640 650 660 670 680
600 610 620 630 640 650
pF1KSD GLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPV
690 700 710 720 730 740
660 670 680 690 700 710
pF1KSD CAKVSITFDPFLYLPVPLPQKQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 CAKVSITFDPFLYLPVPLPQKQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLS
750 760 770 780 790 800
720 730 740 750 760 770
pF1KSD QSVHVKPENLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QSVHVKPENLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQ
810 820 830 840 850 860
780 790 800 810 820 830
pF1KSD QRPQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRPENI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QRPQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRPENI
870 880 890 900 910 920
840 850 860 870 880 890
pF1KSD GYPFLVSVPASRLTYARLAQLLEGYARYSVSVFQPPFQPGRMALESQSPGCTTLLSTGSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GYPFLVSVPASRLTYARLAQLLEGYARYSVSVFQPPFQPGRMALESQSPGCTTLLSTGSL
930 940 950 960 970 980
900 910 920 930 940 950
pF1KSD EAGDSERDPIQPPELQLVTPMAEGDTGLPRVWAAPDRGPVPSTSGISSEMLASGPIEVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EAGDSERDPIQPPELQLVTPMAEGDTGLPRVWAAPDRGPVPSTSGISSEMLASGPIEVGS
990 1000 1010 1020 1030 1040
960 970 980 990 1000 1010
pF1KSD LPAGERVSRPEAAVPGYQHPSEAMNAHTPQFFIYKIDSSNREQRLEDKGDTPLELGDDCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LPAGERVSRPEAAVPGYQHPSEAMNAHTPQFFIYKIDSSNREQRLEDKGDTPLELGDDCS
1050 1060 1070 1080 1090 1100
1020 1030 1040 1050 1060 1070
pF1KSD LALVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LALVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEA
1110 1120 1130 1140 1150 1160
1080 1090 1100 1110 1120 1130
pF1KSD WYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 WYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFC
1170 1180 1190 1200 1210 1220
1140 1150 1160 1170 1180 1190
pF1KSD IGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPNDRSSQRSDVGWRLFDDSTVTTVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 IGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPNDRSSQRSDVGWRLFDDSTVTTVDE
1230 1240 1250 1260 1270 1280
1200 1210 1220 1230 1240 1250
pF1KSD SQVVTRYAYVLFYRRRNSPVERPPRAGHSEHHPDLGPAAEAAASQASRIWQELE-AEEEP
:::::::::::::::::::::::::::::::::::::::::::::. : : : .
CCDS56 SQVVTRYAYVLFYRRRNSPVERPPRAGHSEHHPDLGPAAEAAASQGLGPGQAPEVAPTRT
1290 1300 1310 1320 1330 1340
1260 1270 1280 1290 1300 1310
pF1KSD VPEGSGPLGPWGPQDWVGPLPRGPTTPDEGCLRYFVLGTVAALVALVLNVFYPLVSQSRW
.:: .:
CCDS56 APERFAPPVDRPAPTYSNMEEVD
1350 1360 1370
>>CCDS56255.1 USP19 gene_id:10869|Hs108|chr3 (1384 aa)
initn: 7159 init1: 5821 opt: 7116 Z-score: 5833.0 bits: 1091.7 E(32554): 0
Smith-Waterman score: 7774; 90.8% identity (91.1% similar) in 1297 aa overlap (72-1264:72-1368)
50 60 70 80 90 100
pF1KSD ETGSRYVAQAGLEPLASGDPSASASHAAGITGSRHRTRLFFPSSSGSASTPQEEQTKEGA
::::::::::::::::::::::::::::::
CCDS56 ETGSRYVAQAGLEPLASGDPSASASHAAGITGSRHRTRLFFPSSSGSASTPQEEQTKEGA
50 60 70 80 90 100
110 120 130 140 150 160
pF1KSD CEDPHDLLATPTPELLLDWRQSAEEVIVKLRVGVGPLQLEDVDAAFTDTDCVVRFAGGQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 CEDPHDLLATPTPELLLDWRQSAEEVIVKLRVGVGPLQLEDVDAAFTDTDCVVRFAGGQQ
110 120 130 140 150 160
170 180 190 200
pF1KSD WGGVFYAEIKSSCAKVQTRKGSLLHLTLPKKVPMLTWPSLL-------------------
:::::::::::::::::::::::::::::::::::::::::
CCDS56 WGGVFYAEIKSSCAKVQTRKGSLLHLTLPKKVPMLTWPSLLKKPLGTQELVPGLRCQENG
170 180 190 200 210 220
pF1KSD ------------------------------------------------------------
CCDS56 QELSPIALEPGPEPHRAKQEARNQKRAQGRGEVGAGAGPGAQAGPSAKRAVHLCRGPEGD
230 240 250 260 270 280
210 220 230 240
pF1KSD ----------------------VEADEQLCIPPLNSQTCLLGSEENLAPLAGEKAVPPGN
::::::::::::::::::::::::::::::::::::::
CCDS56 GSRDDPGPRGDAPPFVADPATQVEADEQLCIPPLNSQTCLLGSEENLAPLAGEKAVPPGN
290 300 310 320 330 340
250 260 270 280 290 300
pF1KSD DPVSPAMVRSRNPGKDDCAKEEMAVAADAATLVDEPESMVNLAFVKNDSYEKGPDSVVVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DPVSPAMVRSRNPGKDDCAKEEMAVAADAATLVDEPESMVNLAFVKNDSYEKGPDSVVVH
350 360 370 380 390 400
310 320 330 340 350 360
pF1KSD VYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCT
410 420 430 440 450 460
370 380 390 400 410
pF1KSD FCFTASRIDICLRKRQSQRWGGLEAPAAR--VGGAKVAVPTGPTPLDSTPPGGAPHPLTG
::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
CCDS56 FCFTASRIDICLRKRQSQRWGGLEAPAARGAVGGAKVAVPTGPTPLDSTPPGGAPHPLTG
470 480 490 500 510 520
420 430 440 450 460 470
pF1KSD QEEARAVEKDKSKARSEDTGLDSVATRTPMEHVTPKPETHLASPKPTCMVPPMPHSPVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QEEARAVEKDKSKARSEDTGLDSVATRTPMEHVTPKPETHLASPKPTCMVPPMPHSPVSG
530 540 550 560 570 580
480 490 500 510 520 530
pF1KSD DSVEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DSVEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNN
590 600 610 620 630 640
540 550 560 570 580 590
pF1KSD PLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLD
650 660 670 680 690 700
600 610 620 630 640 650
pF1KSD GLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPV
710 720 730 740 750 760
660 670 680 690 700 710
pF1KSD CAKVSITFDPFLYLPVPLPQKQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 CAKVSITFDPFLYLPVPLPQKQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLS
770 780 790 800 810 820
720 730 740 750 760 770
pF1KSD QSVHVKPENLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QSVHVKPENLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQ
830 840 850 860 870 880
780 790 800 810 820 830
pF1KSD QRPQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRPENI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QRPQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRPENI
890 900 910 920 930 940
840 850 860 870 880 890
pF1KSD GYPFLVSVPASRLTYARLAQLLEGYARYSVSVFQPPFQPGRMALESQSPGCTTLLSTGSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GYPFLVSVPASRLTYARLAQLLEGYARYSVSVFQPPFQPGRMALESQSPGCTTLLSTGSL
950 960 970 980 990 1000
900 910 920 930 940 950
pF1KSD EAGDSERDPIQPPELQLVTPMAEGDTGLPRVWAAPDRGPVPSTSGISSEMLASGPIEVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EAGDSERDPIQPPELQLVTPMAEGDTGLPRVWAAPDRGPVPSTSGISSEMLASGPIEVGS
1010 1020 1030 1040 1050 1060
960 970 980 990 1000 1010
pF1KSD LPAGERVSRPEAAVPGYQHPSEAMNAHTPQFFIYKIDSSNREQRLEDKGDTPLELGDDCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LPAGERVSRPEAAVPGYQHPSEAMNAHTPQFFIYKIDSSNREQRLEDKGDTPLELGDDCS
1070 1080 1090 1100 1110 1120
1020 1030 1040 1050 1060 1070
pF1KSD LALVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LALVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEA
1130 1140 1150 1160 1170 1180
1080 1090 1100 1110 1120 1130
pF1KSD WYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 WYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFC
1190 1200 1210 1220 1230 1240
1140 1150 1160 1170 1180 1190
pF1KSD IGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPNDRSSQRSDVGWRLFDDSTVTTVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 IGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPNDRSSQRSDVGWRLFDDSTVTTVDE
1250 1260 1270 1280 1290 1300
1200 1210 1220 1230 1240 1250
pF1KSD SQVVTRYAYVLFYRRRNSPVERPPRAGHSEHHPDLGPAAEAAASQASRIWQELE-AEEEP
:::::::::::::::::::::::::::::::::::::::::::::. : : : .
CCDS56 SQVVTRYAYVLFYRRRNSPVERPPRAGHSEHHPDLGPAAEAAASQGLGPGQAPEVAPTRT
1310 1320 1330 1340 1350 1360
1260 1270 1280 1290 1300 1310
pF1KSD VPEGSGPLGPWGPQDWVGPLPRGPTTPDEGCLRYFVLGTVAALVALVLNVFYPLVSQSRW
.:: .:
CCDS56 APERFAPPVDRPAPTYSNMEEVD
1370 1380
>--
initn: 468 init1: 468 opt: 468 Z-score: 385.1 bits: 83.6 E(32554): 4e-15
Smith-Waterman score: 468; 100.0% identity (100.0% similar) in 71 aa overlap (1-71:1-71)
10 20 30 40 50 60
pF1KSD MSGGASATGPRRGPPGLEDTTSKKKQKDRANQESKDGDPRKETGSRYVAQAGLEPLASGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MSGGASATGPRRGPPGLEDTTSKKKQKDRANQESKDGDPRKETGSRYVAQAGLEPLASGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSASASHAAGITGSRHRTRLFFPSSSGSASTPQEEQTKEGACEDPHDLLATPTPELLLDW
:::::::::::
CCDS56 PSASASHAAGITGSRHRTRLFFPSSSGSASTPQEEQTKEGACEDPHDLLATPTPELLLDW
70 80 90 100 110 120
>>CCDS2793.1 USP4 gene_id:7375|Hs108|chr3 (963 aa)
initn: 1357 init1: 856 opt: 948 Z-score: 780.8 bits: 156.3 E(32554): 3.6e-37
Smith-Waterman score: 1382; 35.0% identity (57.6% similar) in 826 aa overlap (413-1227:217-936)
390 400 410 420 430 440
pF1KSD LEAPAARVGGAKVAVPTGPTPLDSTPPGGAPHPLTGQEEARAVEKDKSKARSEDTGLDSV
:. : ..... .: : :.. .
CCDS27 YMSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQTLQSKSSTAPSRNFTTSPK
190 200 210 220 230 240
450 460 470 480 490
pF1KSD ATRTPMEHVTPKPETHLASPKPTCMVPPMPHSPVS----GDSVEEEEEEEKKVCL-PGFT
.. .:. :. . .. : . :: : : :: : :. . .: . . ::.
CCDS27 SSASPYSSVSASLIANGDSTS-TC---GMHSSGVSRGGSGFSASYNCQEPPSSHIQPGLC
250 260 270 280 290 300
500 510 520 530 540 550
pF1KSD GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL
:: ::::::::::..: :::: : :.: .::::: .:::: :..: ..: :.. .
CCDS27 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM
310 320 330 340 350 360
560 570 580 590 600 610
pF1KSD WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVD
:.: : .:. :. : ::.:: :.:.::..:::::::::::::...::: : :
CCDS27 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKD
370 380 390 400 410 420
620 630 640 650 660 670
pF1KSD SDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPVPLP
..:::: :::.:::. :..:::: ::: :.: .:: :::: :::::.::::: :: .:::
CCDS27 ANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLP
430 440 450 460 470 480
680 690 700 710 720 730
pF1KSD -QKQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVKPENLRLAEVIKN
.:..:. :: .:: .: .. :.: ... :.. ..::. . ::. .:.: ..
CCDS27 LKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAV-SDLCEALSRLSGIAAENMVVADVYNH
490 500 510 520 530 540
740 750 760 770 780 790
pF1KSD RFHRVFLPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPSVPISKCAACQR
:::..: ...:. . : : .. .:. :. . . :.: : : . : : : .:
CCDS27 RFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRER-KSRPSSTSSA---
550 560 570 580 590
800 810 820 830 840 850
pF1KSD KQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRPENIGYPFLVSVPASRLTYARL
. : : :.:.::: .:: :
CCDS27 ------------SALY--------------------------GQPLLLSVPKHKLTLESL
600 610
860 870 880 890 900 910
pF1KSD AQLLEGYARYSVSVFQP-PFQPGRMALESQSPG-CTTLLSTGSLEAGDSERDPIQPPELQ
: . : : : :: : . : :: :: :. : .: :. : : :..
CCDS27 YQAVCD--RISRYVKQPLPDEFGSSPLE---PGACNG--SRNSCEGEDEE-------EME
620 630 640 650 660
920 930 940 950 960 970
pF1KSD LVTPMAEGDTGLPRVWAAPDRGPVPSTSGISSEMLASGPIEVGSLPAGERVSRPEAAVPG
. :: : :: .:: : :. :. . . :
CCDS27 ---HQEEGKEQL-------------------SETEGSGEDEPGNDPS----ETTQKKIKG
670 680 690
980 990 1000 1010 1020 1030
pF1KSD YQHPSEAMN-AHTPQFFIYKIDSSNREQRLEDKGDTPLELGDDCSLALVWRNNERLQEFV
:.. .. . . .. :.: . .: :.:.. .::. : .. : .
CCDS27 QPCPKRLFTFSLVNSYGTADINSLAADGKL-------LKLNSRSTLAMDWDSETRRLYY-
700 710 720 730 740 750
1040 1050 1060 1070 1080 1090
pF1KSD LVASKELECAEDPGSAGEAARAGHFT--LDQCLNLFTRPEVLAPEEAWYCPQCKQHREAS
.: : : : . . . : : .:..::: :.:. .. ::::.::.:..:.
CCDS27 --DEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQAT
760 770 780 790 800
1100 1110 1120 1130 1140 1150
pF1KSD KQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDL
:.. :: ::..:.:.:::::. . ::::.. .::::.:.:..:.: . . . :::
CCDS27 KKFDLWSLPKILVVHLKRFSYNRY-WRDKLDTVVEFPIRGLNMSEFVCNLSARPY-VYDL
810 820 830 840 850 860
1160 1170 1180 1190 1200 1210
pF1KSD YAVINHYGGMIGGHYTACARLPNDRSSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFY
:: ::::.: ::::: :. : ... : ::::.:. ..:.:.::. ::::::
CCDS27 IAVSNHYGAMGVGHYTAYAK--NKLNGK-----WYYFDDSNVSLASEDQIVTKAAYVLFY
870 880 890 900 910 920
1220 1230 1240 1250 1260 1270
pF1KSD RRRNSPVERPPRAGHSEHHPDLGPAAEAAASQASRIWQELEAEEEPVPEGSGPLGPWGPQ
.::.. . : . :
CCDS27 QRRDDEFYKTPSLSSSGSSDGGTRPSSSQQGFGDDEACSMDTN
930 940 950 960
>>CCDS2794.1 USP4 gene_id:7375|Hs108|chr3 (916 aa)
initn: 1357 init1: 856 opt: 947 Z-score: 780.3 bits: 156.2 E(32554): 3.8e-37
Smith-Waterman score: 1381; 36.8% identity (59.1% similar) in 741 aa overlap (494-1227:252-889)
470 480 490 500 510 520
pF1KSD PTCMVPPMPHSPVSGDSVEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRD
::. :: ::::::::::..: :::: : :
CCDS27 GTWPRQTLQSNGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTD
230 240 250 260 270 280
530 540 550 560 570 580
pF1KSD FFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTG
.: .::::: .:::: :..: ..: :.. .:.: : .:. :. : ::.:
CCDS27 YFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSG
290 300 310 320 330 340
590 600 610 620 630 640
pF1KSD YAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIV
: :.:.::..:::::::::::::...::: : :..:::: :::.:::. :..:::: ::
CCDS27 YQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIV
350 360 370 380 390 400
650 660 670 680 690 700
pF1KSD DLFQGQYKSKLVCPVCAKVSITFDPFLYLPVPLP-QKQKVLPVFYFAREPHSKPIKFLVS
: :.: .:: :::: :::::.::::: :: .::: .:..:. :: .:: .: .. :.
CCDS27 DTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVT
410 420 430 440 450 460
710 720 730 740 750 760
pF1KSD VSKENSTASEVLDSLSQSVHVKPENLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFEL
: ... :.. ..::. . ::. .:.: ..:::..: ...:. . : : .. .:.
CCDS27 VPLMGAV-SDLCEALSRLSGIAAENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEV
470 480 490 500 510 520
770 780 790 800 810 820
pF1KSD LSSELAKERVVVLEVQQRPQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQ
:. . . :.: : : . : : : .: . :
CCDS27 CSTSVDGSECVTLPVYFRER-KSRPSSTSSA---------------SALY----------
530 540 550
830 840 850 860 870 880
pF1KSD KTHWPDHKGLCRPENIGYPFLVSVPASRLTYARLAQLLEGYARYSVSVFQP-PFQPGRMA
: :.:.::: .:: : : . : : : :: : . :
CCDS27 ----------------GQPLLLSVPKHKLTLESLYQAVCD--RISRYVKQPLPDEFGSSP
560 570 580 590
890 900 910 920 930 940
pF1KSD LESQSPG-CTTLLSTGSLEAGDSERDPIQPPELQLVTPMAEGDTGLPRVWAAPDRGPVPS
:: :: :. : .: :. : : :.. . :: :
CCDS27 LE---PGACNG--SRNSCEGEDEE-------EME---HQEEGKEQL--------------
600 610 620
950 960 970 980 990
pF1KSD TSGISSEMLASGPIEVGSLPAGERVSRPEAAVPGYQHPSEAMN-AHTPQFFIYKIDSSNR
:: .:: : :. :. : ... . : :.. .. . . .. :.:
CCDS27 -----SETEGSGEDEPGNDPS-ETTQKK---IKGQPCPKRLFTFSLVNSYGTADINSLAA
630 640 650 660 670
1000 1010 1020 1030 1040 1050
pF1KSD EQRLEDKGDTPLELGDDCSLALVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFT
. .: :.:.. .::. : .. : . .: : : : . . . :
CCDS27 DGKL-------LKLNSRSTLAMDWDSETRRLYY---DEQESEAYEKHVSMLQPQKKKKTT
680 690 700 710 720
1060 1070 1080 1090 1100 1110
pF1KSD --LDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIW
: .:..::: :.:. .. ::::.::.:..:.:.. :: ::..:.:.:::::. . :
CCDS27 VALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRY-W
730 740 750 760 770 780
1120 1130 1140 1150 1160 1170
pF1KSD RDKINDLVEFPVRNLDLSKF-CIGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPNDR
:::.. .::::.:.:..:.: : . . . ::: :: ::::.: ::::: :.
CCDS27 RDKLDTVVEFPIRGLNMSEFVCNLSARPYV--YDLIAVSNHYGAMGVGHYTAYAK-----
790 800 810 820 830 840
1180 1190 1200 1210 1220 1230
pF1KSD SSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRNSPVERPPRAGHSEHHPDLGPA
.. . : ::::.:. ..:.:.::. ::::::.::.. . : . :
CCDS27 --NKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDEFYKTPSLSSSGSSDGGTRP
850 860 870 880 890
1240 1250 1260 1270 1280 1290
pF1KSD AEAAASQASRIWQELEAEEEPVPEGSGPLGPWGPQDWVGPLPRGPTTPDEGCLRYFVLGT
CCDS27 SSSQQGFGDDEACSMDTN
900 910
>>CCDS14277.1 USP11 gene_id:8237|Hs108|chrX (963 aa)
initn: 1300 init1: 800 opt: 886 Z-score: 730.0 bits: 146.9 E(32554): 2.4e-34
Smith-Waterman score: 1349; 35.2% identity (59.5% similar) in 782 aa overlap (470-1245:284-956)
440 450 460 470 480 490
pF1KSD DSVATRTPMEHVTPKPETHLASPKPTCMVPPMPHSPVSGDSVEEEEEEEKKVCLPGFTGL
: . : .... ::.:. : ::. ::
CCDS14 LYDTHITVLDAALETGQLIIMETRKKDGTWPSAQLHVMNNNMSEEDEDFKG--QPGICGL
260 270 280 290 300 310
500 510 520 530 540 550
pF1KSD VNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWK
.::::::::::..: :::. .: ..: . . :.:. :::: :..: ..: :.. :.
CCDS14 TNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQAWS
320 330 340 350 360 370
560 570 580 590 600 610
pF1KSD GTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSD
: :... : .: :. :::: :: :::.::...::::::::::::...: :.: :.
CCDS14 GHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCDAA
380 390 400 410 420 430
620 630 640 650 660 670
pF1KSD GRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPVPLP-Q
::::. ::.:::: :: :::: ::: :.: .:: :::: :..::.::::: :: :::: .
CCDS14 GRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPIS
440 450 460 470 480 490
680 690 700 710 720 730
pF1KSD KQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVKPENLRLAEVIKNRF
...:: ::.. .:. :: . . : :... :.. .::. . ..:: . .:.:...::
CCDS14 HKRVLEVFFIPMDPRRKPEQHRLVVPKKGKI-SDLCVALSKHTGISPERMMVADVFSHRF
500 510 520 530 540 550
740 750 760 770 780 790
pF1KSD HRVFLPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPSVPISKCAACQRKQ
.... . :... : .. .:. . :. ..: ... : ::. ...
CCDS14 YKLYQLEEPLSSILDRDDIFVYEVSG------RIEAIEGSREDIV--VPVY----LRERT
560 570 580 590
800 810 820 830 840 850
pF1KSD QSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRPENIGYPFLVSVPASRLTYARLAQ
..: : :. . :: .:.:.::::: .:.:. : .
CCDS14 PARD-------------YNNS---------YYGLML---FGHPLLVSVPRDRFTWEGLYN
600 610 620 630
860 870 880 890 900 910
pF1KSD LLEGYARYSVSVFQPPFQPGRMALESQSPGCTTLLSTGSLEAGDSERDPIQPPELQLVTP
.: . : : : .: .... : : :.:.: . : :
CCDS14 VL--MYRLSRYVTKP-------NSDDEDDGD---------EKEDDEEDKDDVP-----GP
640 650 660 670
920 930 940 950 960 970
pF1KSD MAEGDTGLPRVWAAPDRGPVPSTSGISSEMLASGPIEVGSLPAGERVSRPEAAVPGYQHP
. :. : : : .: :: . :. . . . : :
CCDS14 STGGSL----------RDPEPEQAGPSSGVTNRCPFLL------------DNCLGTSQWP
680 690 700
980 990 1000 1010 1020 1030
pF1KSD SEAMNAHTPQFFIYKIDSSNREQRLEDKGDTPLELGDDCSLALVWRNNERLQEFVLVASK
. . :.: . .:: . :. .: :. . .:. :. . . . . :
CCDS14 PR---RRRKQLFTLQTVNSNGTS---DRTTSPEEVHAQPYIAIDWEPEMKKRYYDEV---
710 720 730 740 750
1040 1050 1060 1070 1080 1090
pF1KSD ELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWR
: : .: . . . :..:..::: :.: :. ::::.::::. :.:.: ::
CCDS14 EAEGYVKHDCVGYVMKKAPVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWM
760 770 780 790 800 810
1100 1110 1120 1130 1140 1150
pF1KSD LPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLP---SYDLYAVI
::..::..:::::. .: :.:.. :::::.:.::.:.: : ..:. : .::: ::
CCDS14 LPEILIIHLKRFSYTKFS-REKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVS
820 830 840 850 860 870
1160 1170 1180 1190 1200 1210
pF1KSD NHYGGMIGGHYT--ACARLPNDRSSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRR
:::::: :::: :: : :.: :. :::..:. :.:.:. .. ::::::.:
CCDS14 NHYGGMRDGHYTTFAC----NKDSGQ-----WHYFDDNSVSPVNENQIESKAAYVLFYQR
880 890 900 910 920
1220 1230 1240 1250 1260 1270
pF1KSD RNSPVERPPRAGHSEHHPDLGPAAEAAASQASRIWQELEAEEEPVPEGSGPLGPWGPQDW
.. . :: : .::. : .: :
CCDS14 QDVARRLLSPAGSSG-----APASPACSSPPSSEFMDVN
930 940 950 960
1280 1290 1300 1310
pF1KSD VGPLPRGPTTPDEGCLRYFVLGTVAALVALVLNVFYPLVSQSRWR
>>CCDS8963.1 USP15 gene_id:9958|Hs108|chr12 (952 aa)
initn: 1340 init1: 830 opt: 881 Z-score: 726.0 bits: 146.2 E(32554): 4.1e-34
Smith-Waterman score: 1345; 35.8% identity (60.0% similar) in 732 aa overlap (494-1216:257-906)
470 480 490 500 510 520
pF1KSD PTCMVPPMPHSPVSGDSVEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRD
::. :: ::::::::::.:: :::: : .
CCDS89 PNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTE
230 240 250 260 270 280
530 540 550 560 570 580
pF1KSD FFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTG
.: . ... :.:..:::: :..: ..: :.. .:.: : .:. :. : ::.:
CCDS89 YFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSG
290 300 310 320 330 340
590 600 610 620 630 640
pF1KSD YAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIV
: :.: ::..::::::::::::::..::: . :.:::::.:::::::. : ::::.::
CCDS89 YQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV
350 360 370 380 390 400
650 660 670 680 690 700
pF1KSD DLFQGQYKSKLVCPVCAKVSITFDPFLYLPVPLP-QKQKVLPVFYFAREPHSKPIKFLVS
:.:.: .:: :::: :::.:.::::: :: .::: .:...: :. .: .::... :
CCDS89 DIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVV
410 420 430 440 450 460
710 720 730 740 750 760
pF1KSD VSKENSTASEVLDSLSQSVHVKPENLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFEL
: : .. .. .:: . ... .... ..::::.: ...:... : . ::.
CCDS89 VPKIGNIL-DLCTALSALSGIPADKMIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEI
470 480 490 500 510 520
770 780 790 800 810 820
pF1KSD -LSSELAKERVVVLEVQQRPQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLC
.. :.:. .:. : : ::... .
CCDS89 NINRTEDTEHVI------------IPV-----CLR------EKFRHSSY-----------
530 540 550
830 840 850 860 870 880
pF1KSD QKTHWPDHKGLCRPENIGYPFLVSVPASRLTYARLAQLLEGYARYSVSVFQPPFQPGRMA
:: : : .: :::..:: . :: . :: :.. .
CCDS89 --TH---HTG---SSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRY-VKISTETEE-----
560 570 580 590
890 900 910 920 930
pF1KSD LESQSPGCTTLLSTGSLEAGDSERDPIQPPELQLVTPMAEG--DTGLP---RVWAAPDR-
:.. : .:. : :. .: :.. : :. : :: . . :
CCDS89 TEGSLHCCKDQNINGNGPNGIHEEG--SPSEMETDEPDDESSQDQELPSENENSQSEDSV
600 610 620 630 640 650
940 950 960 970 980 990
pF1KSD -GPVPSTSGISSEMLASGPIEVGSLPAGERVSRPEAAVPGYQHPSEAMNAHTPQFFIYKI
: : .:. .: .: . .:.. .: . .: .. :. : :
CCDS89 GGDNDSENGLCTEDTCKGQL------TGHK-KR----LFTFQF-NNLGNTD-----INYI
660 670 680 690
1000 1010 1020 1030 1040 1050
pF1KSD DSSNREQRLEDKGDTPLELGDDCSLALVWRNNERLQEFVLVASKELECAEDPGSAGEAAR
...:. :..:. :.: . ::: : . . . : :....: : . . .
CCDS89 KDDTRHIRFDDR---QLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHE--SVEYKPPK
700 710 720 730 740 750
1060 1070 1080 1090 1100 1110
pF1KSD AGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRS
: .:..::: : :. :. ::::.::.:..:.:.: :: :: ::.:.:::::.
CCDS89 KPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSR
760 770 780 790 800 810
1120 1130 1140 1150 1160 1170
pF1KSD FIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPN
.. :::.. ::.::. .::.:.: :. . :.: :: :::::: :::::: :.
CCDS89 YM-RDKLDTLVDFPINDLDMSEFLINPNAGPC-RYNLIAVSNHYGGMGGGHYTAFAK---
820 830 840 850 860
1180 1190 1200 1210 1220 1230
pF1KSD DRSSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRNSPVERPPRAGHSEHHPDLG
...: : ::::.:.:..:.:.:.. ::::::.:...
CCDS89 ----NKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQRQDTFSGTGFFPLDRETKGASA
870 880 890 900 910 920
1240 1250 1260 1270 1280 1290
pF1KSD PAAEAAASQASRIWQELEAEEEPVPEGSGPLGPWGPQDWVGPLPRGPTTPDEGCLRYFVL
CCDS89 ATGIPLESDEDSNDNDNDIENENCMHTN
930 940 950
>>CCDS58251.1 USP15 gene_id:9958|Hs108|chr12 (981 aa)
initn: 1340 init1: 830 opt: 881 Z-score: 725.8 bits: 146.2 E(32554): 4.2e-34
Smith-Waterman score: 1345; 35.8% identity (60.0% similar) in 732 aa overlap (494-1216:286-935)
470 480 490 500 510 520
pF1KSD PTCMVPPMPHSPVSGDSVEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRD
::. :: ::::::::::.:: :::: : .
CCDS58 RNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTE
260 270 280 290 300 310
530 540 550 560 570 580
pF1KSD FFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTG
.: . ... :.:..:::: :..: ..: :.. .:.: : .:. :. : ::.:
CCDS58 YFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSG
320 330 340 350 360 370
590 600 610 620 630 640
pF1KSD YAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIV
: :.: ::..::::::::::::::..::: . :.:::::.:::::::. : ::::.::
CCDS58 YQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV
380 390 400 410 420 430
650 660 670 680 690 700
pF1KSD DLFQGQYKSKLVCPVCAKVSITFDPFLYLPVPLP-QKQKVLPVFYFAREPHSKPIKFLVS
:.:.: .:: :::: :::.:.::::: :: .::: .:...: :. .: .::... :
CCDS58 DIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVV
440 450 460 470 480 490
710 720 730 740 750 760
pF1KSD VSKENSTASEVLDSLSQSVHVKPENLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFEL
: : .. .. .:: . ... .... ..::::.: ...:... : . ::.
CCDS58 VPKIGNIL-DLCTALSALSGIPADKMIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEI
500 510 520 530 540 550
770 780 790 800 810 820
pF1KSD -LSSELAKERVVVLEVQQRPQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLC
.. :.:. .:. : : ::... .
CCDS58 NINRTEDTEHVI------------IPV-----CLR------EKFRHSSY-----------
560 570 580
830 840 850 860 870 880
pF1KSD QKTHWPDHKGLCRPENIGYPFLVSVPASRLTYARLAQLLEGYARYSVSVFQPPFQPGRMA
:: : : .: :::..:: . :: . :: :.. .
CCDS58 --TH---HTG---SSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRY-VKISTETEE-----
590 600 610 620
890 900 910 920 930
pF1KSD LESQSPGCTTLLSTGSLEAGDSERDPIQPPELQLVTPMAEG--DTGLP---RVWAAPDR-
:.. : .:. : :. .: :.. : :. : :: . . :
CCDS58 TEGSLHCCKDQNINGNGPNGIHEEG--SPSEMETDEPDDESSQDQELPSENENSQSEDSV
630 640 650 660 670 680
940 950 960 970 980 990
pF1KSD -GPVPSTSGISSEMLASGPIEVGSLPAGERVSRPEAAVPGYQHPSEAMNAHTPQFFIYKI
: : .:. .: .: . .:.. .: . .: .. :. : :
CCDS58 GGDNDSENGLCTEDTCKGQL------TGHK-KR----LFTFQF-NNLGNTD-----INYI
690 700 710 720
1000 1010 1020 1030 1040 1050
pF1KSD DSSNREQRLEDKGDTPLELGDDCSLALVWRNNERLQEFVLVASKELECAEDPGSAGEAAR
...:. :..:. :.: . ::: : . . . : :....: : . . .
CCDS58 KDDTRHIRFDDR---QLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHE--SVEYKPPK
730 740 750 760 770 780
1060 1070 1080 1090 1100 1110
pF1KSD AGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRS
: .:..::: : :. :. ::::.::.:..:.:.: :: :: ::.:.:::::.
CCDS58 KPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSR
790 800 810 820 830 840
1120 1130 1140 1150 1160 1170
pF1KSD FIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPN
.. :::.. ::.::. .::.:.: :. . :.: :: :::::: :::::: :.
CCDS58 YM-RDKLDTLVDFPINDLDMSEFLINPNAGPC-RYNLIAVSNHYGGMGGGHYTAFAK---
850 860 870 880 890
1180 1190 1200 1210 1220 1230
pF1KSD DRSSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRNSPVERPPRAGHSEHHPDLG
...: : ::::.:.:..:.:.:.. ::::::.:...
CCDS58 ----NKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQRQDTFSGTGFFPLDRETKGASA
900 910 920 930 940 950
1240 1250 1260 1270 1280 1290
pF1KSD PAAEAAASQASRIWQELEAEEEPVPEGSGPLGPWGPQDWVGPLPRGPTTPDEGCLRYFVL
CCDS58 ATGIPLESDEDSNDNDNDIENENCMHTN
960 970 980
>>CCDS32697.1 USP32 gene_id:84669|Hs108|chr17 (1604 aa)
initn: 982 init1: 668 opt: 686 Z-score: 562.8 bits: 116.7 E(32554): 5e-25
Smith-Waterman score: 801; 30.2% identity (54.9% similar) in 705 aa overlap (448-1139:687-1313)
420 430 440 450 460 470
pF1KSD GQEEARAVEKDKSKARSEDTGLDSVATRTPMEHVTPKPETHLASP-KPTCMVPPMPHSPV
.:.. . : ::. . : : : .
CCDS32 QRLRIKEEDMRLWLYNSENYLTLLDDEDHKLEYLKIQDEQHLVIEVRNKDMSWPEEMSFI
660 670 680 690 700 710
480 490 500 510 520 530
pF1KSD SGDS-VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEIN
...: ..... .: : ::: :::::::::: :: .:::. : ..: . :.:
CCDS32 ANSSKIDRHKVPTEK----GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELN
720 730 740 750 760 770
540 550 560 570 580 590
pF1KSD YNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAF
.::.: :..: .. :.. ::.::.. : ::. .:. : .:.:. :.:.::..::
CCDS32 RTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAF
780 790 800 810 820 830
600 610 620 630 640 650
pF1KSD LLDGLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLV
:::::::::::...:::.: ::::::: :: :::. : :: :..::::.:: .:..
CCDS32 LLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQVK
840 850 860 870 880 890
660 670 680 690 700 710
pF1KSD CPVCAKVSITFDPFLYLPVPLPQKQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLD
: .:...:. :::: .: .:::. . . . . . :... . .. ... .. .
CCDS32 CKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGTTPVRYGLRLNMDEKYTG-LKK
900 910 920 930 940 950
720 730 740 750 760 770
pF1KSD SLSQSVHVKPENLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFELLSSELAKERVVVL
.::. .. :.. :::: . . . : ... .: : : ::.
CCDS32 QLSDLCGLNSEQILLAEVHGSNI-KNFPQDNQKVRLSVSGFLCAFEI-------------
960 970 980 990
780 790 800 810 820 830
pF1KSD EVQQRPQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRP
: :: ::: . : .: :.. : : : ::
CCDS32 -----P-VPVSPISASSPTQTDFSSSPST-------------NEMFTLTTNGD---LPRP
1000 1010 1020 1030
840 850 860 870 880 890
pF1KSD ENI--GYPFLVSVPASRLTYARLAQ-LLEGYARYSVSVFQPPFQPGRMALESQSPGCTTL
: :.: : :: . : ... ...:. :. . :: .:.. . .
CCDS32 IFIPNGMPNTV-VPCG--TEKNFTNGMVNGHMP---SLPDSPFTGYIIAVHRK------M
1040 1050 1060 1070 1080
900 910 920 930 940
pF1KSD LSTGSLEAGDSERDPIQPPELQLVTP---MAEGDTGLPRVWAAPDRGPVPSTSGISSEML
. : : .:... . . :..: .. :: .: : .:.
CCDS32 MRT-ELYFLSSQKNRPSLFGMPLIVPCTVHTRKKDLYDAVWIQVSRLASPLPPQEASNHA
1090 1100 1110 1120 1130 1140
950 960 970 980 990 1000
pF1KSD ASGPIEVG-SLPAGERVSRPEAAVPGYQHPSEAMNAHTPQF-FIY--KIDSSNREQRLED
. .: . : :: . .. : : . : ::: .. . .
CCDS32 QDCDDSMGYQYPFTLRVVQKDGNS----------CAWCPWYRFCRGCKIDCGEDRAFI--
1150 1160 1170 1180 1190
1010 1020 1030 1040 1050 1060
pF1KSD KGDTPLELG-DDCSLALVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCL
:.. . . : .: : .... :: :. : : .:. .. :.: ..::.::
CCDS32 -GNAYIAVDWDPTALHLRYQTS---QERVV---DEHESVEQ----SRRAQAEPINLDSCL
1200 1210 1220 1230
1070 1080 1090 1100 1110 1120
pF1KSD NLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDL
:: : :. .: .:: .:: : :.:.: ::::: .::..::::.: . : : . .
CCDS32 RAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPILIIHLKRFQFVNGRWI-KSQKI
1240 1250 1260 1270 1280 1290
1130 1140 1150 1160 1170 1180
pF1KSD VEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPNDRSSQRSDVG
:.:: ...: : : .
CCDS32 VKFPRESFDPSAFLVPRDPALCQHKPLTPQGDELSEPRILAREVKKVDAQSSAGEEDVLL
1300 1310 1320 1330 1340 1350
1318 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 18:50:48 2016 done: Thu Nov 3 18:50:49 2016
Total Scan time: 5.940 Total Display time: 0.590
Function used was FASTA [36.3.4 Apr, 2011]