Result of FASTA (omim) for
pF1KSDA0832
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0832, 458 aa
1>>>pF1KSDA0832 458 - 458 aa - 458 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6201+/-0.000338; mu= 12.8718+/- 0.021
mean_var=109.4783+/-22.129, 0's: 0 Z-trim(117.3): 415 B-trim: 27 in 1/61
Lambda= 0.122577
statistics sampled from 28791 (29207) to 28791 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.342), width: 16
Scan time: 9.900
The best scores are: opt bits E(85289)
NP_001429 (OMIM: 602969) estrogen-related receptor ( 458) 3059 551.6 1.6e-156
XP_011507572 (OMIM: 602969) PREDICTED: estrogen-re ( 465) 3026 545.7 9.5e-155
XP_016856116 (OMIM: 602969) PREDICTED: estrogen-re ( 463) 2933 529.3 8.4e-150
XP_016856115 (OMIM: 602969) PREDICTED: estrogen-re ( 463) 2933 529.3 8.4e-150
XP_011507568 (OMIM: 602969) PREDICTED: estrogen-re ( 470) 2930 528.8 1.2e-149
XP_016856117 (OMIM: 602969) PREDICTED: estrogen-re ( 461) 2902 523.8 3.8e-148
NP_001230443 (OMIM: 602969) estrogen-related recep ( 435) 2900 523.4 4.6e-148
NP_001230442 (OMIM: 602969) estrogen-related recep ( 435) 2900 523.4 4.6e-148
NP_001230444 (OMIM: 602969) estrogen-related recep ( 435) 2900 523.4 4.6e-148
NP_001230438 (OMIM: 602969) estrogen-related recep ( 435) 2900 523.4 4.6e-148
NP_996317 (OMIM: 602969) estrogen-related receptor ( 435) 2900 523.4 4.6e-148
NP_001127757 (OMIM: 602969) estrogen-related recep ( 435) 2900 523.4 4.6e-148
XP_016856135 (OMIM: 602969) PREDICTED: estrogen-re ( 435) 2900 523.4 4.6e-148
NP_001230448 (OMIM: 602969) estrogen-related recep ( 435) 2900 523.4 4.6e-148
XP_016856133 (OMIM: 602969) PREDICTED: estrogen-re ( 435) 2900 523.4 4.6e-148
XP_016856131 (OMIM: 602969) PREDICTED: estrogen-re ( 435) 2900 523.4 4.6e-148
XP_016856132 (OMIM: 602969) PREDICTED: estrogen-re ( 435) 2900 523.4 4.6e-148
XP_016856129 (OMIM: 602969) PREDICTED: estrogen-re ( 435) 2900 523.4 4.6e-148
XP_016856134 (OMIM: 602969) PREDICTED: estrogen-re ( 435) 2900 523.4 4.6e-148
XP_016856137 (OMIM: 602969) PREDICTED: estrogen-re ( 435) 2900 523.4 4.6e-148
XP_016856127 (OMIM: 602969) PREDICTED: estrogen-re ( 435) 2900 523.4 4.6e-148
NP_996318 (OMIM: 602969) estrogen-related receptor ( 435) 2900 523.4 4.6e-148
XP_016856128 (OMIM: 602969) PREDICTED: estrogen-re ( 435) 2900 523.4 4.6e-148
NP_001230441 (OMIM: 602969) estrogen-related recep ( 435) 2900 523.4 4.6e-148
NP_001230439 (OMIM: 602969) estrogen-related recep ( 435) 2900 523.4 4.6e-148
XP_016856136 (OMIM: 602969) PREDICTED: estrogen-re ( 435) 2900 523.4 4.6e-148
XP_016856130 (OMIM: 602969) PREDICTED: estrogen-re ( 435) 2900 523.4 4.6e-148
NP_001230440 (OMIM: 602969) estrogen-related recep ( 435) 2900 523.4 4.6e-148
XP_016856138 (OMIM: 602969) PREDICTED: estrogen-re ( 435) 2900 523.4 4.6e-148
XP_011507571 (OMIM: 602969) PREDICTED: estrogen-re ( 470) 2900 523.5 4.9e-148
XP_011507570 (OMIM: 602969) PREDICTED: estrogen-re ( 470) 2900 523.5 4.9e-148
NP_001230447 (OMIM: 602969) estrogen-related recep ( 470) 2900 523.5 4.9e-148
XP_011507569 (OMIM: 602969) PREDICTED: estrogen-re ( 470) 2900 523.5 4.9e-148
XP_016856118 (OMIM: 602969) PREDICTED: estrogen-re ( 447) 2897 522.9 6.8e-148
XP_016856119 (OMIM: 602969) PREDICTED: estrogen-re ( 447) 2897 522.9 6.8e-148
XP_011507573 (OMIM: 602969) PREDICTED: estrogen-re ( 447) 2897 522.9 6.8e-148
XP_016856114 (OMIM: 602969) PREDICTED: estrogen-re ( 477) 2897 522.9 7.1e-148
XP_016856113 (OMIM: 602969) PREDICTED: estrogen-re ( 477) 2897 522.9 7.1e-148
XP_016856111 (OMIM: 602969) PREDICTED: estrogen-re ( 477) 2897 522.9 7.1e-148
XP_016856112 (OMIM: 602969) PREDICTED: estrogen-re ( 477) 2897 522.9 7.1e-148
XP_016856110 (OMIM: 602969) PREDICTED: estrogen-re ( 477) 2897 522.9 7.1e-148
XP_011507567 (OMIM: 602969) PREDICTED: estrogen-re ( 477) 2897 522.9 7.1e-148
XP_016856125 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 2867 517.6 2.6e-146
XP_011507582 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 2867 517.6 2.6e-146
XP_011507580 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 2867 517.6 2.6e-146
XP_016856120 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 2867 517.6 2.6e-146
XP_011507576 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 2867 517.6 2.6e-146
XP_016856121 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 2867 517.6 2.6e-146
XP_016856122 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 2867 517.6 2.6e-146
XP_011507577 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 2867 517.6 2.6e-146
>>NP_001429 (OMIM: 602969) estrogen-related receptor gam (458 aa)
initn: 3059 init1: 3059 opt: 3059 Z-score: 2930.9 bits: 551.6 E(85289): 1.6e-156
Smith-Waterman score: 3059; 100.0% identity (100.0% similar) in 458 aa overlap (1-458:1-458)
10 20 30 40 50 60
pF1KSD MDSVELCLPESFSLHYEEELLCRMSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDSVELCLPESFSLHYEEELLCRMSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD SSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYML
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD QACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD LLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT
370 380 390 400 410 420
430 440 450
pF1KSD LPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
::::::::::::::::::::::::::::::::::::::
NP_001 LPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
430 440 450
>>XP_011507572 (OMIM: 602969) PREDICTED: estrogen-relate (465 aa)
initn: 3037 init1: 1622 opt: 3026 Z-score: 2899.2 bits: 545.7 E(85289): 9.5e-155
Smith-Waterman score: 3026; 98.3% identity (98.3% similar) in 465 aa overlap (1-458:1-465)
10 20 30 40 50 60
pF1KSD MDSVELCLPESFSLHYEEELLCRMSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDSVELCLPESFSLHYEEELLCRMSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD SSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYML
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSC
130 140 150 160 170 180
190 200 210 220 230
pF1KSD QACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPY------
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPLLWSDPA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KSD -NKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KSD LADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLV
310 320 330 340 350 360
360 370 380 390 400 410
pF1KSD KKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRR
370 380 390 400 410 420
420 430 440 450
pF1KSD AGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
:::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
430 440 450 460
>>XP_016856116 (OMIM: 602969) PREDICTED: estrogen-relate (463 aa)
initn: 2931 init1: 2931 opt: 2933 Z-score: 2810.4 bits: 529.3 E(85289): 8.4e-150
Smith-Waterman score: 2933; 97.6% identity (98.5% similar) in 452 aa overlap (7-458:18-463)
10 20 30 40
pF1KSD MDSVELCLPESFSLHYEEELLCRMSNKDRHIDSSCSSFIKTEPSSPASL
:.: . ..::::::::::::::::::::::::::::::
XP_016 MWRECDWGLGAVKSDLACVPSA------KRLLCRMSNKDRHIDSSCSSFIKTEPSSPASL
10 20 30 40 50
50 60 70 80 90 100
pF1KSD TDSVNHHSPGGSSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDSVNHHSPGGSSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIV
60 70 80 90 100 110
110 120 130 140 150 160
pF1KSD EDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNE
120 130 140 150 160 170
170 180 190 200 210 220
pF1KSD CEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQP
180 190 200 210 220 230
230 240 250 260 270 280
pF1KSD AKKPYNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKKPYNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGF
240 250 260 270 280 290
290 300 310 320 330 340
pF1KSD STLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAI
300 310 320 330 340 350
350 360 370 380 390 400
pF1KSD LQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME
360 370 380 390 400 410
410 420 430 440 450
pF1KSD DPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
420 430 440 450 460
>>XP_016856115 (OMIM: 602969) PREDICTED: estrogen-relate (463 aa)
initn: 2931 init1: 2931 opt: 2933 Z-score: 2810.4 bits: 529.3 E(85289): 8.4e-150
Smith-Waterman score: 2933; 97.6% identity (98.5% similar) in 452 aa overlap (7-458:18-463)
10 20 30 40
pF1KSD MDSVELCLPESFSLHYEEELLCRMSNKDRHIDSSCSSFIKTEPSSPASL
:.: . ..::::::::::::::::::::::::::::::
XP_016 MWRECDWGLGAVKSDLACVPSA------KRLLCRMSNKDRHIDSSCSSFIKTEPSSPASL
10 20 30 40 50
50 60 70 80 90 100
pF1KSD TDSVNHHSPGGSSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDSVNHHSPGGSSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIV
60 70 80 90 100 110
110 120 130 140 150 160
pF1KSD EDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNE
120 130 140 150 160 170
170 180 190 200 210 220
pF1KSD CEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQP
180 190 200 210 220 230
230 240 250 260 270 280
pF1KSD AKKPYNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKKPYNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGF
240 250 260 270 280 290
290 300 310 320 330 340
pF1KSD STLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAI
300 310 320 330 340 350
350 360 370 380 390 400
pF1KSD LQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME
360 370 380 390 400 410
410 420 430 440 450
pF1KSD DPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
420 430 440 450 460
>>XP_011507568 (OMIM: 602969) PREDICTED: estrogen-relate (470 aa)
initn: 2930 init1: 2930 opt: 2930 Z-score: 2807.4 bits: 528.8 E(85289): 1.2e-149
Smith-Waterman score: 2930; 100.0% identity (100.0% similar) in 439 aa overlap (20-458:32-470)
10 20 30 40
pF1KSD MDSVELCLPESFSLHYEEELLCRMSNKDRHIDSSCSSFIKTEPSSPASL
::::::::::::::::::::::::::::::
XP_011 SWGGSKNRKKKRQHDWSLVNEGVSGLEAGRLLCRMSNKDRHIDSSCSSFIKTEPSSPASL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KSD TDSVNHHSPGGSSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TDSVNHHSPGGSSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIV
70 80 90 100 110 120
110 120 130 140 150 160
pF1KSD EDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KSD CEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQP
190 200 210 220 230 240
230 240 250 260 270 280
pF1KSD AKKPYNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AKKPYNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGF
250 260 270 280 290 300
290 300 310 320 330 340
pF1KSD STLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAI
310 320 330 340 350 360
350 360 370 380 390 400
pF1KSD LQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHME
370 380 390 400 410 420
410 420 430 440 450
pF1KSD DPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
430 440 450 460 470
>>XP_016856117 (OMIM: 602969) PREDICTED: estrogen-relate (461 aa)
initn: 2911 init1: 1496 opt: 2902 Z-score: 2780.8 bits: 523.8 E(85289): 3.8e-148
Smith-Waterman score: 2902; 96.9% identity (97.6% similar) in 454 aa overlap (13-458:8-461)
10 20 30 40 50
pF1KSD MDSVELCLPESFSLHY-EEELLCRMSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPG
:.: ..::::::::::::::::::::::::::::::::::::::::
XP_016 MQTEGAASVHRGTKQLLCRMSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPG
10 20 30 40 50
60 70 80 90 100 110
pF1KSD GSSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD LNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD CQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPY-----
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPLLWSDP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD --NKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ADNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL
300 310 320 330 340 350
360 370 380 390 400 410
pF1KSD VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPR
360 370 380 390 400 410
420 430 440 450
pF1KSD RAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
420 430 440 450 460
>>NP_001230443 (OMIM: 602969) estrogen-related receptor (435 aa)
initn: 2900 init1: 2900 opt: 2900 Z-score: 2779.2 bits: 523.4 E(85289): 4.6e-148
Smith-Waterman score: 2900; 100.0% identity (100.0% similar) in 435 aa overlap (24-458:1-435)
10 20 30 40 50 60
pF1KSD MDSVELCLPESFSLHYEEELLCRMSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPGG
:::::::::::::::::::::::::::::::::::::
NP_001 MSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPGG
10 20 30
70 80 90 100 110 120
pF1KSD SSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYML
40 50 60 70 80 90
130 140 150 160 170 180
pF1KSD NSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSC
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD QACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSH
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD LLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSL
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD LQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMK
280 290 300 310 320 330
370 380 390 400 410 420
pF1KSD LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT
340 350 360 370 380 390
430 440 450
pF1KSD LPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
::::::::::::::::::::::::::::::::::::::
NP_001 LPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
400 410 420 430
>>NP_001230442 (OMIM: 602969) estrogen-related receptor (435 aa)
initn: 2900 init1: 2900 opt: 2900 Z-score: 2779.2 bits: 523.4 E(85289): 4.6e-148
Smith-Waterman score: 2900; 100.0% identity (100.0% similar) in 435 aa overlap (24-458:1-435)
10 20 30 40 50 60
pF1KSD MDSVELCLPESFSLHYEEELLCRMSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPGG
:::::::::::::::::::::::::::::::::::::
NP_001 MSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPGG
10 20 30
70 80 90 100 110 120
pF1KSD SSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYML
40 50 60 70 80 90
130 140 150 160 170 180
pF1KSD NSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSC
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD QACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSH
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD LLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSL
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD LQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMK
280 290 300 310 320 330
370 380 390 400 410 420
pF1KSD LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT
340 350 360 370 380 390
430 440 450
pF1KSD LPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
::::::::::::::::::::::::::::::::::::::
NP_001 LPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
400 410 420 430
>>NP_001230444 (OMIM: 602969) estrogen-related receptor (435 aa)
initn: 2900 init1: 2900 opt: 2900 Z-score: 2779.2 bits: 523.4 E(85289): 4.6e-148
Smith-Waterman score: 2900; 100.0% identity (100.0% similar) in 435 aa overlap (24-458:1-435)
10 20 30 40 50 60
pF1KSD MDSVELCLPESFSLHYEEELLCRMSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPGG
:::::::::::::::::::::::::::::::::::::
NP_001 MSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPGG
10 20 30
70 80 90 100 110 120
pF1KSD SSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYML
40 50 60 70 80 90
130 140 150 160 170 180
pF1KSD NSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSC
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD QACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSH
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD LLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSL
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD LQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMK
280 290 300 310 320 330
370 380 390 400 410 420
pF1KSD LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT
340 350 360 370 380 390
430 440 450
pF1KSD LPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
::::::::::::::::::::::::::::::::::::::
NP_001 LPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
400 410 420 430
>>NP_001230438 (OMIM: 602969) estrogen-related receptor (435 aa)
initn: 2900 init1: 2900 opt: 2900 Z-score: 2779.2 bits: 523.4 E(85289): 4.6e-148
Smith-Waterman score: 2900; 100.0% identity (100.0% similar) in 435 aa overlap (24-458:1-435)
10 20 30 40 50 60
pF1KSD MDSVELCLPESFSLHYEEELLCRMSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPGG
:::::::::::::::::::::::::::::::::::::
NP_001 MSNKDRHIDSSCSSFIKTEPSSPASLTDSVNHHSPGG
10 20 30
70 80 90 100 110 120
pF1KSD SSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDASGSYSSTMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYML
40 50 60 70 80 90
130 140 150 160 170 180
pF1KSD NSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSC
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD QACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSH
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD LLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSL
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD LQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMK
280 290 300 310 320 330
370 380 390 400 410 420
pF1KSD LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT
340 350 360 370 380 390
430 440 450
pF1KSD LPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
::::::::::::::::::::::::::::::::::::::
NP_001 LPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV
400 410 420 430
458 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 03:37:59 2016 done: Thu Nov 3 03:38:01 2016
Total Scan time: 9.900 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]