Result of FASTA (ccds) for
pF1KSDA0817
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0817, 2778 aa
1>>>pF1KSDA0817 2778 - 2778 aa - 2778 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.0419+/-0.00108; mu= 12.5044+/- 0.066
mean_var=319.8692+/-62.543, 0's: 0 Z-trim(114.6): 120 B-trim: 16 in 1/53
Lambda= 0.071711
statistics sampled from 15067 (15187) to 15067 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.467), width: 16
Scan time: 9.610
The best scores are: opt bits E(32554)
CCDS12604.2 MEGF8 gene_id:1954|Hs108|chr19 (2778) 20471 2134.0 0
CCDS62693.1 MEGF8 gene_id:1954|Hs108|chr19 (2845) 15429 1612.4 0
CCDS7592.1 ATRNL1 gene_id:26033|Hs108|chr10 (1379) 618 79.7 1.3e-13
CCDS73204.1 ATRNL1 gene_id:26033|Hs108|chr10 ( 467) 535 70.5 2.4e-11
>>CCDS12604.2 MEGF8 gene_id:1954|Hs108|chr19 (2778 aa)
initn: 20471 init1: 20471 opt: 20471 Z-score: 11454.8 bits: 2134.0 E(32554): 0
Smith-Waterman score: 20471; 100.0% identity (100.0% similar) in 2778 aa overlap (1-2778:1-2778)
10 20 30 40 50 60
pF1KSD MALGKVLAMALVLALAVLGSLSPGARAGDCKGQRQVLREAPGFVTDGAGNYSVNGNCEWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MALGKVLAMALVLALAVLGSLSPGARAGDCKGQRQVLREAPGFVTDGAGNYSVNGNCEWL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD IEAPSPQHRILLDFLFLDTECTYDYLFVYDGDSPRGPLLASLSGSTRPPPIEASSGKMLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 IEAPSPQHRILLDFLFLDTECTYDYLFVYDGDSPRGPLLASLSGSTRPPPIEASSGKMLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD HLFSDANYNLLGFNASFRFSLCPGGCQSHGQCQPPGVCACEPGWGGPDCGLQECSAYCGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 HLFSDANYNLLGFNASFRFSLCPGGCQSHGQCQPPGVCACEPGWGGPDCGLQECSAYCGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD HGTCASPLGPCRCEPGFLGRACDLHLWENQGAGWWHNVSARDPAFSARIGAAGAFLSPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 HGTCASPLGPCRCEPGFLGRACDLHLWENQGAGWWHNVSARDPAFSARIGAAGAFLSPPG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD LLAVFGGQDLNNALGDLVLYNFSANTWESWDLSPAPAARHSHVAVAWAGSLVLMGGELAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LLAVFGGQDLNNALGDLVLYNFSANTWESWDLSPAPAARHSHVAVAWAGSLVLMGGELAD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD GSLTNDVWAFSPLGRGHWELLAPPASSSSGPPGLAGHAAALVDDVWLYVSGGRTPHDLFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GSLTNDVWAFSPLGRGHWELLAPPASSSSGPPGLAGHAAALVDDVWLYVSGGRTPHDLFS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SGLFRFRLDSTSGGYWEQVIPAGGRPPAATGHSMVFHAPSRALLVHGGHRPSTARFSVRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 SGLFRFRLDSTSGGYWEQVIPAGGRPPAATGHSMVFHAPSRALLVHGGHRPSTARFSVRV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD NSTELFHVDRHVWTTLKGRDGLQGPRERAFHTASVLGNYMVVYGGNVHTHYQEEKCYEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 NSTELFHVDRHVWTTLKGRDGLQGPRERAFHTASVLGNYMVVYGGNVHTHYQEEKCYEDG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD IFFYHLGCHQWVSGAELAPPGTPEGRAAPPSGRYSHVAAVLGGSVLLVAGGYSGRPRGDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 IFFYHLGCHQWVSGAELAPPGTPEGRAAPPSGRYSHVAAVLGGSVLLVAGGYSGRPRGDL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD MAYKVPPFVFQAPAPDYHLDYCSMYTDHSVCSRDPECSWCQGACQAAPPPGTPLGACPAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MAYKVPPFVFQAPAPDYHLDYCSMYTDHSVCSRDPECSWCQGACQAAPPPGTPLGACPAA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD SCLGLGRLLGDCQACLAFSSPTAPPRGPGTLGWCVHNESCLPRPEQARCRGEQISGTVGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 SCLGLGRLLGDCQACLAFSSPTAPPRGPGTLGWCVHNESCLPRPEQARCRGEQISGTVGW
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD WGPAPVFVTSLEACVTQSFLPGLHLLTFQQPPNTSQPDKEEVGRWVAHQEKETRRLQRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 WGPAPVFVTSLEACVTQSFLPGLHLLTFQQPPNTSQPDKEEVGRWVAHQEKETRRLQRPG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD SARLFPLPGRDHKYAVEIQGQLNGSAGPGHSELTLLWDRTGVPGGSEISFFFLEPYRSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 SARLFPLPGRDHKYAVEIQGQLNGSAGPGHSELTLLWDRTGVPGGSEISFFFLEPYRSSS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD CTSYSSCLGCLADQGCGWCLTSATCHLRQGGAHCGDDGAGGSLLVLVPTLCPLCEEHRDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 CTSYSSCLGCLADQGCGWCLTSATCHLRQGGAHCGDDGAGGSLLVLVPTLCPLCEEHRDC
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD HACTQDPFCEWHQSTSRKGDAACSRRGRGRGALKSPEECPPLCSQRLTCEDCLANSSQCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 HACTQDPFCEWHQSTSRKGDAACSRRGRGRGALKSPEECPPLCSQRLTCEDCLANSSQCA
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD WCQSTHTCFLFAAYLARYPHGGCRGWDDSVHSEPRCRSCDGFLTCHECLQSHECGWCGNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 WCQSTHTCFLFAAYLARYPHGGCRGWDDSVHSEPRCRSCDGFLTCHECLQSHECGWCGNE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD DNPTLGRCLQGDFSGPLGGGNCSLWVGEGLGLPVALPARWAYARCPDVDECRLGLARCHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DNPTLGRCLQGDFSGPLGGGNCSLWVGEGLGLPVALPARWAYARCPDVDECRLGLARCHP
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD RATCLNTPLSYECHCQRGYQGDGISHCNRTCLEDCGHGVCSGPPDFTCVCDLGWTSDLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 RATCLNTPLSYECHCQRGYQGDGISHCNRTCLEDCGHGVCSGPPDFTCVCDLGWTSDLPP
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD PTPAPGPPAPRCSRDCGCSFHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATGSRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PTPAPGPPAPRCSRDCGCSFHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATGSRG
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KSD CRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAGGSCFRECGGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 CRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAGGSCFRECGGRA
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KSD LLTNVSSVALGSRRVGGLLPPGGGAARAGPGLSYCVWVVSATEELQPCAPGTLCPPLTLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LLTNVSSVALGSRRVGGLLPPGGGAARAGPGLSYCVWVVSATEELQPCAPGTLCPPLTLT
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KSD FSPDSSTPCTLSYVLAFDGFPRFLDTGVVQSDRSLIAAFCGQRRDRPLTVQALSGLLVLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 FSPDSSTPCTLSYVLAFDGFPRFLDTGVVQSDRSLIAAFCGQRRDRPLTVQALSGLLVLH
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KSD WEANGSSSWGFNASVGSARCGSGGPGSCPVPQECVPQDGAAGAGLCRCPQGWAGPHCRMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 WEANGSSSWGFNASVGSARCGSGGPGSCPVPQECVPQDGAAGAGLCRCPQGWAGPHCRMA
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KSD LCPENCNAHTGAGTCNQSLGVCICAEGFGGPDCATKLDGGQLVWETLMDSRLSADTASRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LCPENCNAHTGAGTCNQSLGVCICAEGFGGPDCATKLDGGQLVWETLMDSRLSADTASRF
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KSD LHRLGHTMVDGPDATLWMFGGLGLPQGLLGNLYRYSVSERRWTQMLAGAEDGGPGPSPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LHRLGHTMVDGPDATLWMFGGLGLPQGLLGNLYRYSVSERRWTQMLAGAEDGGPGPSPRS
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KSD FHAAAYVPAGRGAMYLLGGLTAGGVTRDFWVLNLTTLQWRQEKAPQTVELPAVAGHTLTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 FHAAAYVPAGRGAMYLLGGLTAGGVTRDFWVLNLTTLQWRQEKAPQTVELPAVAGHTLTA
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KSD RRGLSLLLVGGYSPENGFNQQLLEYQLATGTWVSGAQSGTPPTGLYGHSAVYHEATDSLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 RRGLSLLLVGGYSPENGFNQQLLEYQLATGTWVSGAQSGTPPTGLYGHSAVYHEATDSLY
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KSD VFGGFRFHVELAAPSPELYSLHCPDRTWSLLAPSQGAKRDRMRNVRGSSRGLGQVPGEQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VFGGFRFHVELAAPSPELYSLHCPDRTWSLLAPSQGAKRDRMRNVRGSSRGLGQVPGEQP
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KSD GSWGFREVRKKMALWAALAGTGGFLEEISPHLKEPRPRLFHASALLGDTMVVLGGRSDPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GSWGFREVRKKMALWAALAGTGGFLEEISPHLKEPRPRLFHASALLGDTMVVLGGRSDPD
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KSD EFSSDVLLYQVNCNAWLLPDLTRSASVGPPMEESVAHAVAAVGSRLYISGGFGGVALGRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 EFSSDVLLYQVNCNAWLLPDLTRSASVGPPMEESVAHAVAAVGSRLYISGGFGGVALGRL
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KSD LALTLPPDPCRLLSSPEACNQSGACTWCHGACLSGDQAHRLGCGGSPCSPMPRSPEECRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LALTLPPDPCRLLSSPEACNQSGACTWCHGACLSGDQAHRLGCGGSPCSPMPRSPEECRR
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KSD LRTCSECLARHPRTLQPGDGEASTPRCKWCTNCPEGACIGRNGSCTSENDCRINQREVFW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LRTCSECLARHPRTLQPGDGEASTPRCKWCTNCPEGACIGRNGSCTSENDCRINQREVFW
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KSD AGNCSEAACGAADCEQCTREGKCMWTRQFKRTGETRRILSVQPTYDWTCFSHSLLNVSPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 AGNCSEAACGAADCEQCTREGKCMWTRQFKRTGETRRILSVQPTYDWTCFSHSLLNVSPM
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KSD PVESSPPLPCPTPCHLLPNCTSCLDSKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAGGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PVESSPPLPCPTPCHLLPNCTSCLDSKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAGGC
1990 2000 2010 2020 2030 2040
2050 2060 2070 2080 2090 2100
pF1KSD GRLLRGPESCSLGCAQATQCALCLRRPHCGWCAWGGQDGGGRCMEGGLSGPRDGLTCGRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GRLLRGPESCSLGCAQATQCALCLRRPHCGWCAWGGQDGGGRCMEGGLSGPRDGLTCGRP
2050 2060 2070 2080 2090 2100
2110 2120 2130 2140 2150 2160
pF1KSD GASWAFLSCPPEDECANGHHDCNETQNCHDQPHGYECSCKTGYTMDNMTGLCRPVCAQGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GASWAFLSCPPEDECANGHHDCNETQNCHDQPHGYECSCKTGYTMDNMTGLCRPVCAQGC
2110 2120 2130 2140 2150 2160
2170 2180 2190 2200 2210 2220
pF1KSD VNGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNHTKGSHCEQCLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VNGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNHTKGSHCEQCLP
2170 2180 2190 2200 2210 2220
2230 2240 2250 2260 2270 2280
pF1KSD LFVGSAVGGGTCRPCHAFCRGNSHICISRKELQMSKGEPKKYSLDPEEIENWVTEGPSED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LFVGSAVGGGTCRPCHAFCRGNSHICISRKELQMSKGEPKKYSLDPEEIENWVTEGPSED
2230 2240 2250 2260 2270 2280
2290 2300 2310 2320 2330 2340
pF1KSD EAVCVNCQNNSYGEKCESCLQGYFLLDGKCTKCQCNGHADTCNEQDGTGCPCQNNTETGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 EAVCVNCQNNSYGEKCESCLQGYFLLDGKCTKCQCNGHADTCNEQDGTGCPCQNNTETGT
2290 2300 2310 2320 2330 2340
2350 2360 2370 2380 2390 2400
pF1KSD CQGSSPSDRRDCYKYQCAKCRESFHGSPLGGQQCYRLISVEQECCLDPTSQTNCFHEPKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 CQGSSPSDRRDCYKYQCAKCRESFHGSPLGGQQCYRLISVEQECCLDPTSQTNCFHEPKR
2350 2360 2370 2380 2390 2400
2410 2420 2430 2440 2450 2460
pF1KSD RALGPGRTVLFGVQPKFTNVDIRLTLDVTFGAVDLYVSTSYDTFVVRVAPDTGVHTVHIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 RALGPGRTVLFGVQPKFTNVDIRLTLDVTFGAVDLYVSTSYDTFVVRVAPDTGVHTVHIQ
2410 2420 2430 2440 2450 2460
2470 2480 2490 2500 2510 2520
pF1KSD PPPAPPPPPPPADGGPRGAGDPGGAGASSGPGAPAEPRVREVWPRGLITYVTVTEPSAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PPPAPPPPPPPADGGPRGAGDPGGAGASSGPGAPAEPRVREVWPRGLITYVTVTEPSAVL
2470 2480 2490 2500 2510 2520
2530 2540 2550 2560 2570 2580
pF1KSD VVRGVRDRLVITYPHEHHALKSSRFYLLLLGVGDPSGPGANGSADSQGLLFFRQDQAHID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VVRGVRDRLVITYPHEHHALKSSRFYLLLLGVGDPSGPGANGSADSQGLLFFRQDQAHID
2530 2540 2550 2560 2570 2580
2590 2600 2610 2620 2630 2640
pF1KSD LFVFFSVFFSCFFLFLSLCVLLWKAKQALDQRQEQRRHLQEMTKMASRPFAKVTVCFPPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LFVFFSVFFSCFFLFLSLCVLLWKAKQALDQRQEQRRHLQEMTKMASRPFAKVTVCFPPD
2590 2600 2610 2620 2630 2640
2650 2660 2670 2680 2690 2700
pF1KSD PTAPASAWKPAGLPPPAFRRSEPFLAPLLLTGAGGPWGPMGGGCCPPAIPATTAGLRAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PTAPASAWKPAGLPPPAFRRSEPFLAPLLLTGAGGPWGPMGGGCCPPAIPATTAGLRAGP
2650 2660 2670 2680 2690 2700
2710 2720 2730 2740 2750 2760
pF1KSD ITLEPTEDGMAGVATLLLQLPGGPHAPNGACLGSALVTLRHRLHEYCGGGGGAGGSGHGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 ITLEPTEDGMAGVATLLLQLPGGPHAPNGACLGSALVTLRHRLHEYCGGGGGAGGSGHGT
2710 2720 2730 2740 2750 2760
2770
pF1KSD GAGRKGLLSQDNLTSMSL
::::::::::::::::::
CCDS12 GAGRKGLLSQDNLTSMSL
2770
>>CCDS62693.1 MEGF8 gene_id:1954|Hs108|chr19 (2845 aa)
initn: 15416 init1: 15416 opt: 15429 Z-score: 8635.6 bits: 1612.4 E(32554): 0
Smith-Waterman score: 20107; 97.6% identity (97.6% similar) in 2810 aa overlap (36-2778:36-2845)
10 20 30 40 50 60
pF1KSD VLAMALVLALAVLGSLSPGARAGDCKGQRQVLREAPGFVTDGAGNYSVNGNCEWLIEAPS
::::::::::::::::::::::::::::::
CCDS62 VLAMALVLALAVLGSLSPGARAGDCKGQRQVLREAPGFVTDGAGNYSVNGNCEWLIEAPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PQHRILLDFLFLDTECTYDYLFVYDGDSPRGPLLASLSGSTRPPPIEASSGKMLLHLFSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PQHRILLDFLFLDTECTYDYLFVYDGDSPRGPLLASLSGSTRPPPIEASSGKMLLHLFSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD ANYNLLGFNASFRFSLCPGGCQSHGQCQPPGVCACEPGWGGPDCGLQECSAYCGSHGTCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 ANYNLLGFNASFRFSLCPGGCQSHGQCQPPGVCACEPGWGGPDCGLQECSAYCGSHGTCA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SPLGPCRCEPGFLGRACDLHLWENQGAGWWHNVSARDPAFSARIGAAGAFLSPPGLLAVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 SPLGPCRCEPGFLGRACDLHLWENQGAGWWHNVSARDPAFSARIGAAGAFLSPPGLLAVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GGQDLNNALGDLVLYNFSANTWESWDLSPAPAARHSHVAVAWAGSLVLMGGELADGSLTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 GGQDLNNALGDLVLYNFSANTWESWDLSPAPAARHSHVAVAWAGSLVLMGGELADGSLTN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD DVWAFSPLGRGHWELLAPPASSSSGPPGLAGHAAALVDDVWLYVSGGRTPHDLFSSGLFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 DVWAFSPLGRGHWELLAPPASSSSGPPGLAGHAAALVDDVWLYVSGGRTPHDLFSSGLFR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FRLDSTSGGYWEQVIPAGGRPPAATGHSMVFHAPSRALLVHGGHRPSTARFSVRVNSTEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 FRLDSTSGGYWEQVIPAGGRPPAATGHSMVFHAPSRALLVHGGHRPSTARFSVRVNSTEL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FHVDRHVWTTLKGRDGLQGPRERAFHTASVLGNYMVVYGGNVHTHYQEEKCYEDGIFFYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 FHVDRHVWTTLKGRDGLQGPRERAFHTASVLGNYMVVYGGNVHTHYQEEKCYEDGIFFYH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD LGCHQWVSGAELAPPGTPEGRAAPPSGRYSHVAAVLGGSVLLVAGGYSGRPRGDLMAYKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LGCHQWVSGAELAPPGTPEGRAAPPSGRYSHVAAVLGGSVLLVAGGYSGRPRGDLMAYKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD PPFVFQAPAPDYHLDYCSMYTDHSVCSRDPECSWCQGACQAAPPPGTPLGACPAASCLGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PPFVFQAPAPDYHLDYCSMYTDHSVCSRDPECSWCQGACQAAPPPGTPLGACPAASCLGL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD GRLLGDCQACLAFSSPTAPPRGPGTLGWCVHNESCLPRPEQARCRGEQISGTVGWWGPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 GRLLGDCQACLAFSSPTAPPRGPGTLGWCVHNESCLPRPEQARCRGEQISGTVGWWGPAP
610 620 630 640 650 660
670 680 690
pF1KSD VFVTSLEACVTQSFLPGLHLLTFQQPPNTSQPDK--------------------------
::::::::::::::::::::::::::::::::::
CCDS62 VFVTSLEACVTQSFLPGLHLLTFQQPPNTSQPDKVSIVRSTTITLTPSAETDVSLVYRGF
670 680 690 700 710 720
700 710
pF1KSD -----------------------------------------EEVGRWVAHQEKETRRLQR
:::::::::::::::::::
CCDS62 IYPMLPGGPGGPGAEDVAVWTRAQRLHVLARMARGPDTENMEEVGRWVAHQEKETRRLQR
730 740 750 760 770 780
720 730 740 750 760 770
pF1KSD PGSARLFPLPGRDHKYAVEIQGQLNGSAGPGHSELTLLWDRTGVPGGSEISFFFLEPYRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PGSARLFPLPGRDHKYAVEIQGQLNGSAGPGHSELTLLWDRTGVPGGSEISFFFLEPYRS
790 800 810 820 830 840
780 790 800 810 820 830
pF1KSD SSCTSYSSCLGCLADQGCGWCLTSATCHLRQGGAHCGDDGAGGSLLVLVPTLCPLCEEHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 SSCTSYSSCLGCLADQGCGWCLTSATCHLRQGGAHCGDDGAGGSLLVLVPTLCPLCEEHR
850 860 870 880 890 900
840 850 860 870 880 890
pF1KSD DCHACTQDPFCEWHQSTSRKGDAACSRRGRGRGALKSPEECPPLCSQRLTCEDCLANSSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 DCHACTQDPFCEWHQSTSRKGDAACSRRGRGRGALKSPEECPPLCSQRLTCEDCLANSSQ
910 920 930 940 950 960
900 910 920 930 940 950
pF1KSD CAWCQSTHTCFLFAAYLARYPHGGCRGWDDSVHSEPRCRSCDGFLTCHECLQSHECGWCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 CAWCQSTHTCFLFAAYLARYPHGGCRGWDDSVHSEPRCRSCDGFLTCHECLQSHECGWCG
970 980 990 1000 1010 1020
960 970 980 990 1000 1010
pF1KSD NEDNPTLGRCLQGDFSGPLGGGNCSLWVGEGLGLPVALPARWAYARCPDVDECRLGLARC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 NEDNPTLGRCLQGDFSGPLGGGNCSLWVGEGLGLPVALPARWAYARCPDVDECRLGLARC
1030 1040 1050 1060 1070 1080
1020 1030 1040 1050 1060 1070
pF1KSD HPRATCLNTPLSYECHCQRGYQGDGISHCNRTCLEDCGHGVCSGPPDFTCVCDLGWTSDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 HPRATCLNTPLSYECHCQRGYQGDGISHCNRTCLEDCGHGVCSGPPDFTCVCDLGWTSDL
1090 1100 1110 1120 1130 1140
1080 1090 1100 1110 1120 1130
pF1KSD PPPTPAPGPPAPRCSRDCGCSFHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PPPTPAPGPPAPRCSRDCGCSFHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATGS
1150 1160 1170 1180 1190 1200
1140 1150 1160 1170 1180 1190
pF1KSD RGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAGGSCFRECGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 RGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAGGSCFRECGG
1210 1220 1230 1240 1250 1260
1200 1210 1220 1230 1240 1250
pF1KSD RALLTNVSSVALGSRRVGGLLPPGGGAARAGPGLSYCVWVVSATEELQPCAPGTLCPPLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 RALLTNVSSVALGSRRVGGLLPPGGGAARAGPGLSYCVWVVSATEELQPCAPGTLCPPLT
1270 1280 1290 1300 1310 1320
1260 1270 1280 1290 1300 1310
pF1KSD LTFSPDSSTPCTLSYVLAFDGFPRFLDTGVVQSDRSLIAAFCGQRRDRPLTVQALSGLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LTFSPDSSTPCTLSYVLAFDGFPRFLDTGVVQSDRSLIAAFCGQRRDRPLTVQALSGLLV
1330 1340 1350 1360 1370 1380
1320 1330 1340 1350 1360 1370
pF1KSD LHWEANGSSSWGFNASVGSARCGSGGPGSCPVPQECVPQDGAAGAGLCRCPQGWAGPHCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LHWEANGSSSWGFNASVGSARCGSGGPGSCPVPQECVPQDGAAGAGLCRCPQGWAGPHCR
1390 1400 1410 1420 1430 1440
1380 1390 1400 1410 1420 1430
pF1KSD MALCPENCNAHTGAGTCNQSLGVCICAEGFGGPDCATKLDGGQLVWETLMDSRLSADTAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 MALCPENCNAHTGAGTCNQSLGVCICAEGFGGPDCATKLDGGQLVWETLMDSRLSADTAS
1450 1460 1470 1480 1490 1500
1440 1450 1460 1470 1480 1490
pF1KSD RFLHRLGHTMVDGPDATLWMFGGLGLPQGLLGNLYRYSVSERRWTQMLAGAEDGGPGPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 RFLHRLGHTMVDGPDATLWMFGGLGLPQGLLGNLYRYSVSERRWTQMLAGAEDGGPGPSP
1510 1520 1530 1540 1550 1560
1500 1510 1520 1530 1540 1550
pF1KSD RSFHAAAYVPAGRGAMYLLGGLTAGGVTRDFWVLNLTTLQWRQEKAPQTVELPAVAGHTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 RSFHAAAYVPAGRGAMYLLGGLTAGGVTRDFWVLNLTTLQWRQEKAPQTVELPAVAGHTL
1570 1580 1590 1600 1610 1620
1560 1570 1580 1590 1600 1610
pF1KSD TARRGLSLLLVGGYSPENGFNQQLLEYQLATGTWVSGAQSGTPPTGLYGHSAVYHEATDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 TARRGLSLLLVGGYSPENGFNQQLLEYQLATGTWVSGAQSGTPPTGLYGHSAVYHEATDS
1630 1640 1650 1660 1670 1680
1620 1630 1640 1650 1660 1670
pF1KSD LYVFGGFRFHVELAAPSPELYSLHCPDRTWSLLAPSQGAKRDRMRNVRGSSRGLGQVPGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LYVFGGFRFHVELAAPSPELYSLHCPDRTWSLLAPSQGAKRDRMRNVRGSSRGLGQVPGE
1690 1700 1710 1720 1730 1740
1680 1690 1700 1710 1720 1730
pF1KSD QPGSWGFREVRKKMALWAALAGTGGFLEEISPHLKEPRPRLFHASALLGDTMVVLGGRSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 QPGSWGFREVRKKMALWAALAGTGGFLEEISPHLKEPRPRLFHASALLGDTMVVLGGRSD
1750 1760 1770 1780 1790 1800
1740 1750 1760 1770 1780 1790
pF1KSD PDEFSSDVLLYQVNCNAWLLPDLTRSASVGPPMEESVAHAVAAVGSRLYISGGFGGVALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PDEFSSDVLLYQVNCNAWLLPDLTRSASVGPPMEESVAHAVAAVGSRLYISGGFGGVALG
1810 1820 1830 1840 1850 1860
1800 1810 1820 1830 1840 1850
pF1KSD RLLALTLPPDPCRLLSSPEACNQSGACTWCHGACLSGDQAHRLGCGGSPCSPMPRSPEEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 RLLALTLPPDPCRLLSSPEACNQSGACTWCHGACLSGDQAHRLGCGGSPCSPMPRSPEEC
1870 1880 1890 1900 1910 1920
1860 1870 1880 1890 1900 1910
pF1KSD RRLRTCSECLARHPRTLQPGDGEASTPRCKWCTNCPEGACIGRNGSCTSENDCRINQREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 RRLRTCSECLARHPRTLQPGDGEASTPRCKWCTNCPEGACIGRNGSCTSENDCRINQREV
1930 1940 1950 1960 1970 1980
1920 1930 1940 1950 1960 1970
pF1KSD FWAGNCSEAACGAADCEQCTREGKCMWTRQFKRTGETRRILSVQPTYDWTCFSHSLLNVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 FWAGNCSEAACGAADCEQCTREGKCMWTRQFKRTGETRRILSVQPTYDWTCFSHSLLNVS
1990 2000 2010 2020 2030 2040
1980 1990 2000 2010 2020 2030
pF1KSD PMPVESSPPLPCPTPCHLLPNCTSCLDSKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PMPVESSPPLPCPTPCHLLPNCTSCLDSKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAG
2050 2060 2070 2080 2090 2100
2040 2050 2060 2070 2080 2090
pF1KSD GCGRLLRGPESCSLGCAQATQCALCLRRPHCGWCAWGGQDGGGRCMEGGLSGPRDGLTCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 GCGRLLRGPESCSLGCAQATQCALCLRRPHCGWCAWGGQDGGGRCMEGGLSGPRDGLTCG
2110 2120 2130 2140 2150 2160
2100 2110 2120 2130 2140 2150
pF1KSD RPGASWAFLSCPPEDECANGHHDCNETQNCHDQPHGYECSCKTGYTMDNMTGLCRPVCAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 RPGASWAFLSCPPEDECANGHHDCNETQNCHDQPHGYECSCKTGYTMDNMTGLCRPVCAQ
2170 2180 2190 2200 2210 2220
2160 2170 2180 2190 2200 2210
pF1KSD GCVNGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNHTKGSHCEQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 GCVNGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNHTKGSHCEQC
2230 2240 2250 2260 2270 2280
2220 2230 2240 2250 2260 2270
pF1KSD LPLFVGSAVGGGTCRPCHAFCRGNSHICISRKELQMSKGEPKKYSLDPEEIENWVTEGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LPLFVGSAVGGGTCRPCHAFCRGNSHICISRKELQMSKGEPKKYSLDPEEIENWVTEGPS
2290 2300 2310 2320 2330 2340
2280 2290 2300 2310 2320 2330
pF1KSD EDEAVCVNCQNNSYGEKCESCLQGYFLLDGKCTKCQCNGHADTCNEQDGTGCPCQNNTET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 EDEAVCVNCQNNSYGEKCESCLQGYFLLDGKCTKCQCNGHADTCNEQDGTGCPCQNNTET
2350 2360 2370 2380 2390 2400
2340 2350 2360 2370 2380 2390
pF1KSD GTCQGSSPSDRRDCYKYQCAKCRESFHGSPLGGQQCYRLISVEQECCLDPTSQTNCFHEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 GTCQGSSPSDRRDCYKYQCAKCRESFHGSPLGGQQCYRLISVEQECCLDPTSQTNCFHEP
2410 2420 2430 2440 2450 2460
2400 2410 2420 2430 2440 2450
pF1KSD KRRALGPGRTVLFGVQPKFTNVDIRLTLDVTFGAVDLYVSTSYDTFVVRVAPDTGVHTVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 KRRALGPGRTVLFGVQPKFTNVDIRLTLDVTFGAVDLYVSTSYDTFVVRVAPDTGVHTVH
2470 2480 2490 2500 2510 2520
2460 2470 2480 2490 2500 2510
pF1KSD IQPPPAPPPPPPPADGGPRGAGDPGGAGASSGPGAPAEPRVREVWPRGLITYVTVTEPSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 IQPPPAPPPPPPPADGGPRGAGDPGGAGASSGPGAPAEPRVREVWPRGLITYVTVTEPSA
2530 2540 2550 2560 2570 2580
2520 2530 2540 2550 2560 2570
pF1KSD VLVVRGVRDRLVITYPHEHHALKSSRFYLLLLGVGDPSGPGANGSADSQGLLFFRQDQAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 VLVVRGVRDRLVITYPHEHHALKSSRFYLLLLGVGDPSGPGANGSADSQGLLFFRQDQAH
2590 2600 2610 2620 2630 2640
2580 2590 2600 2610 2620 2630
pF1KSD IDLFVFFSVFFSCFFLFLSLCVLLWKAKQALDQRQEQRRHLQEMTKMASRPFAKVTVCFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 IDLFVFFSVFFSCFFLFLSLCVLLWKAKQALDQRQEQRRHLQEMTKMASRPFAKVTVCFP
2650 2660 2670 2680 2690 2700
2640 2650 2660 2670 2680 2690
pF1KSD PDPTAPASAWKPAGLPPPAFRRSEPFLAPLLLTGAGGPWGPMGGGCCPPAIPATTAGLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PDPTAPASAWKPAGLPPPAFRRSEPFLAPLLLTGAGGPWGPMGGGCCPPAIPATTAGLRA
2710 2720 2730 2740 2750 2760
2700 2710 2720 2730 2740 2750
pF1KSD GPITLEPTEDGMAGVATLLLQLPGGPHAPNGACLGSALVTLRHRLHEYCGGGGGAGGSGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 GPITLEPTEDGMAGVATLLLQLPGGPHAPNGACLGSALVTLRHRLHEYCGGGGGAGGSGH
2770 2780 2790 2800 2810 2820
2760 2770
pF1KSD GTGAGRKGLLSQDNLTSMSL
::::::::::::::::::::
CCDS62 GTGAGRKGLLSQDNLTSMSL
2830 2840
>>CCDS7592.1 ATRNL1 gene_id:26033|Hs108|chr10 (1379 aa)
initn: 818 init1: 176 opt: 618 Z-score: 357.9 bits: 79.7 E(32554): 1.3e-13
Smith-Waterman score: 1159; 25.2% identity (49.1% similar) in 1224 aa overlap (24-1193:87-1107)
10 20 30 40 50
pF1KSD MALGKVLAMALVLALAVLGSLSPGARAGDCKGQRQVLREAPGFVTDGAGNYSV
: . :.: : : : :..::: ::.
CCDS75 VSQSKPCERTGSCFSGRCVNSTCLCDPGWVGDQCQHCQG-RFKLTEPSGYLTDGPINYKY
60 70 80 90 100 110
60 70 80 90 100
pF1KSD NGNCEWLIEAPSPQHRILLDFLFLDTECTYDYLFVYDGDSPRGPLLASLSGSTRP-----
. .: ::::. :. . : : . :::..:...:::::: .::.: ::: :
CCDS75 KTKCTWLIEG-YPNAVLRLRFNHFATECSWDHMYVYDGDSIYAPLIAVLSGLIVPEIRGN
120 130 140 150 160 170
110 120 130 140 150
pF1KSD ---PPIEASSGKMLLHLFSDANYNLLGFNASFRFSLCPGGCQSHGQCQ-----PPGV-CA
: . ..:: :::.:::: ::: ::: . .. ::..:..::.: : : :
CCDS75 ETVPEVVTTSGYALLHFFSDAAYNLTGFNIFYSINSCPNNCSGHGKCTTSVSVPSQVYCE
180 190 200 210 220 230
160 170 180 190 200 210
pF1KSD CEPGWGGPDCGLQECSAYCGS--HGTCA-SPLGPCRCEPGFLGRACDLHLWENQGAGWWH
:. : : : . :.: ::: :: : . : :. .. : :.:.. ... .:
CCDS75 CDKYWKGEACDIPYCKANCGSPDHGYCDLTGEKLCVCNDSWQGPDCSLNVPSTES--YWI
240 250 260 270 280 290
220 230 240 250 260 270
pF1KSD NVSARDPAFSARIGAAGAFLSPPG-LLAVFGGQDLNNALGDLVL-YNFSANTWESWDLSP
... : :: .: :. : .. :.:: .: . ..:: ::. .. :. :
CCDS75 LPNVK-P-FSPSVGRASHKAVLHGKFMWVIGGYTFNYSSFQMVLNYNLESSIWNVGTPSR
300 310 320 330 340 350
280 290 300 310 320 330
pF1KSD APAARHSHVAVAWAGSLVLMGG--ELADGSLTNDVWAFSPLGRGHWELLAPPASSSSGPP
.: :..: . . .. ..:: : ::..:...:.:. . : .: . . .
CCDS75 GPLQRYGHSLALYQENIFMYGGRIETNDGNVTDELWVFN-IHSQSWSTKTPTVLGHGQQY
360 370 380 390 400
340 350 360 370 380
pF1KSD GLAGHAAALVD----DVWLYVSGGRTPHDLFSSGLFRFRLDSTSGGYWEQVIPA--GGRP
.. ::.: ... :: . . : . ..:.. .....:.. : ..: :.
CCDS75 AVEGHSAHIMELDSRDVVMIIIFGYSAIYGYTSSIQEYHISSNT---W--LVPETKGAIV
410 420 430 440 450 460
390 400 410 420 430 440
pF1KSD PAATGHSMVFHAPSRALLVHGGHRPSTARFSVRVNSTELFHVDRHVWTTLKGRDGLQGPR
.. ::. :. .... ::::.. . :.. ..:. ..:: :: ..:.
CCDS75 QGGYGHTSVYDEITKSIYVHGGYKALPGNKYGLVDDLYKYEVNTKTWTILK-ESGF----
470 480 490 500 510
450 460 470 480 490 500
pF1KSD ERAFHTASVLGNYMVVYGGNVHTHYQEE---KCYEDGIFFYHLGCHQWVSGAELAPPGTP
: .:.: .... :...:::.:. . ::. .. : ..: .: : :.
CCDS75 ARYLHSAVLINGAMLIFGGNTHNDTSLSNGAKCFSADFLAYDIACDEW---KILPKPNLH
520 530 540 550 560 570
510 520 530 540 550 560
pF1KSD EGRAAPPSGRYSHVAAVLGGSVLLVAGGYSGRPRGDLMAYKVPPFVFQAPAPDYHLDYCS
. .:..: :.:..:: . . ::.:. .:...:: :: :.
CCDS75 RD-----VNRFGHSAVVINGS-MYIFGGFSSVLLNDILVYK-PP-------------NCK
580 590 600 610
570 580 590 600 610
pF1KSD MYTDHSVCSR-DP--ECSWCQGACQAAPPPGTP--LGA-CPAASCLGLGRLL--GDCQAC
. :. .:. : .: : .. :.. .: : : :: . . : .:: .:
CCDS75 AFRDEELCKNAGPGIKCVWNKNHCESWESGNTNNILRAKCPPKTAASDDRCYRYADCASC
620 630 640 650 660 670
620 630 640 650 660
pF1KSD LAFSSPTAPPRGPGTLGWC------VHNESC-LPRPEQARC--RGEQISGTVGWWGPAPV
:: : :: : .: . . ..: :.::: . .
CCDS75 ------TANTNG---CQWCDDKKCISANSNCSMSVKNYTKCHVRNEQICNKL--------
680 690 700 710
670 680 690 700 710 720
pF1KSD FVTSLEACVTQSFLPGLHLLTFQQPPNTSQPDKEEVGRWVAHQEKETRRLQRPGSARLFP
:: ..: .:. :. . . . :. .: :.. :.:
CCDS75 --TSCKSCSL-----NLNCQWDQRQQECQALPAHLCGEGWSHIGDACLRVN---SSR---
720 730 740 750 760
730 740 750 760 770 780
pF1KSD LPGRDHK--YAVEIQGQLNGSAGPGHSELTLLWDRTGVPGGSEISFFFLEPYRSSSCTSY
. :. : ...:.: . . . :..: .:: . : ... . .
CCDS75 -ENYDNAKLYCYNLSGNLASLTTSKEVEFVL----------DEI-----QKYTQQKVSPW
770 780 790 800 810
790 800 810 820 830 840
pF1KSD SSCLGCLADQGCGWCLTSATCH--LRQGGAHCGDDGAGGSLLVLVPTLCPLCEEHRDCHA
. : . . :: : . :. .. .:.: .: : : :
CCDS75 VG-LRKINISYWGWEDMSPFTNTTLQWLPGEPNDSG-----------FCAYLE--RAAVA
820 830 840 850
850 860 870 880 890 900
pF1KSD CTQDPFCEWHQSTSRKGDAACSRRGRGRGALKSPEECPPLCSQRLTCEDCLANSSQCAWC
. : :: . .: . . . : : :: : .: .: .:. .: ::
CCDS75 GLKANPC-----TSMANGLVCEKPVVSPNQNARP--CKKPCSLRTSCSNCTSNGMECMWC
860 870 880 890 900
910 920 930 940 950 960
pF1KSD QSTHTCFLFAAYLARYPHGGCRGWDDSVHSEPRCRSCDGFLTCHECLQSHECGWCGNEDN
.::. : ::. .:.: : :. .. : : ..:.:. :: .::.. ::::.. .:
CCDS75 SSTKRCVDSNAYIISFPYGQCLEWQTATCS-P--QNCSGLRTCGQCLEQPGCGWCNDPSN
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD PTLGRCLQGDFSGPLGGGNCSLWVGEGLGLPVALPARWAYARCPDVDECRLGLARCHPRA
:.:..:. ::. . .:. :
CCDS75 TGRGHCIEGSSRGPM----------KLIGM--------------------------HHSE
970 980 990
1030 1040 1050 1060 1070 1080
pF1KSD TCLNTPLSYECHCQRGYQGDGISHCNRTCLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPT
:.: : : ...:. . : .:
CCDS75 MVLDTNL---CPKEKNYEWSFI-QC-----------------------------------
1000 1010
1090 1100 1110 1120 1130 1140
pF1KSD PAPGPPAPRCSRDCGCSFHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATGSRGCR
:: : :. :: : . . :..:.. : :..:. : :: .:. :.. :
CCDS75 PA-----------CQCNGHSTCINN--NVCEQCKNLTTGKQCQDCMPGYYGDPTNGGQCT
1020 1030 1040 1050
1150 1160 1170 1180 1190
pF1KSD PCQCNGHGDPRRGHCDNLSGLCFCQDH-TEGAHCQLCSPG--YYGDPRAGGSCFRECGGR
: :.::.. : .: ::: . .: .::::. : :.: : .:.
CCDS75 ACTCSGHANI----CHLHTGKCFCTTKGIKGDQCQLCDSENRYVGNPLRG-TCYYSLLID
1060 1070 1080 1090 1100 1110
1200 1210 1220 1230 1240 1250
pF1KSD ALLTNVSSVALGSRRVGGLLPPGGGAARAGPGLSYCVWVVSATEELQPCAPGTLCPPLTL
CCDS75 YQFTFSLLQEDDRHHTAINFIANPEQSNKNLDISINASNNFNLNITWSVGSTAGTISGEE
1120 1130 1140 1150 1160 1170
>>CCDS73204.1 ATRNL1 gene_id:26033|Hs108|chr10 (467 aa)
initn: 455 init1: 176 opt: 535 Z-score: 317.0 bits: 70.5 E(32554): 2.4e-11
Smith-Waterman score: 617; 31.4% identity (57.8% similar) in 370 aa overlap (24-368:87-449)
10 20 30 40 50
pF1KSD MALGKVLAMALVLALAVLGSLSPGARAGDCKGQRQVLREAPGFVTDGAGNYSV
: . :.: : : : :..::: ::.
CCDS73 VSQSKPCERTGSCFSGRCVNSTCLCDPGWVGDQCQHCQG-RFKLTEPSGYLTDGPINYKY
60 70 80 90 100 110
60 70 80 90 100
pF1KSD NGNCEWLIEAPSPQHRILLDFLFLDTECTYDYLFVYDGDSPRGPLLASLSGSTRP-----
. .: ::::. :. . : : . :::..:...:::::: .::.: ::: :
CCDS73 KTKCTWLIEG-YPNAVLRLRFNHFATECSWDHMYVYDGDSIYAPLIAVLSGLIVPEIRGN
120 130 140 150 160 170
110 120 130 140 150
pF1KSD ---PPIEASSGKMLLHLFSDANYNLLGFNASFRFSLCPGGCQSHGQCQ-----PPGV-CA
: . ..:: :::.:::: ::: ::: . .. ::..:..::.: : : :
CCDS73 ETVPEVVTTSGYALLHFFSDAAYNLTGFNIFYSINSCPNNCSGHGKCTTSVSVPSQVYCE
180 190 200 210 220 230
160 170 180 190 200 210
pF1KSD CEPGWGGPDCGLQECSAYCGS--HGTCA-SPLGPCRCEPGFLGRACDLHLWENQGAGWWH
:. : : : . :.: ::: :: : . : :. .. : :.:.. ... .:
CCDS73 CDKYWKGEACDIPYCKANCGSPDHGYCDLTGEKLCVCNDSWQGPDCSLNVPSTES--YWI
240 250 260 270 280 290
220 230 240 250 260 270
pF1KSD NVSARDPAFSARIGAAGAFLSPPG-LLAVFGGQDLNNALGDLVL-YNFSANTWESWDLSP
... : :: .: :. : .. :.:: .: . ..:: ::. .. :. :
CCDS73 LPNVK-P-FSPSVGRASHKAVLHGKFMWVIGGYTFNYSSFQMVLNYNLESSIWNVGTPSR
300 310 320 330 340 350
280 290 300 310 320 330
pF1KSD APAARHSHVAVAWAGSLVLMGG--ELADGSLTNDVWAFSPLGRGHWELLAPPASSSSGPP
.: :..: . . .. ..:: : ::..:...:.:. . : .: . . .
CCDS73 GPLQRYGHSLALYQENIFMYGGRIETNDGNVTDELWVFN-IHSQSWSTKTPTVLGHGQQY
360 370 380 390 400
340 350 360 370 380
pF1KSD GLAGHAAALVD----DVWLYVSGGRTPHDLFSSGLFRFRLDSTSGGYWEQVIPAGGRPPA
.. ::.: ... :: . . : . ..:.. ....
CCDS73 AVEGHSAHIMELDSRDVVMIIIFGYSAIYGYTSSIQEYHICELLKNCNFFIDWECFSL
410 420 430 440 450 460
390 400 410 420 430 440
pF1KSD ATGHSMVFHAPSRALLVHGGHRPSTARFSVRVNSTELFHVDRHVWTTLKGRDGLQGPRER
2778 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 03:15:49 2016 done: Thu Nov 3 03:15:50 2016
Total Scan time: 9.610 Total Display time: 0.960
Function used was FASTA [36.3.4 Apr, 2011]