Result of FASTA (omim) for
pF1KSDA0693
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0693, 396 aa
1>>>pF1KSDA0693 396 - 396 aa - 396 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.1572+/-0.000476; mu= -9.7704+/- 0.029
mean_var=329.2631+/-69.641, 0's: 0 Z-trim(119.2): 115 B-trim: 20 in 1/53
Lambda= 0.070681
statistics sampled from 32880 (33001) to 32880 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.387), width: 16
Scan time: 7.990
The best scores are: opt bits E(85289)
NP_945173 (OMIM: 606472) calcium-responsive transa ( 396) 2700 289.0 1.4e-77
XP_005260446 (OMIM: 606472) PREDICTED: calcium-res ( 416) 2644 283.3 7.4e-76
XP_016883273 (OMIM: 606472) PREDICTED: calcium-res ( 373) 2556 274.3 3.4e-73
XP_011527066 (OMIM: 606472) PREDICTED: calcium-res ( 374) 2556 274.3 3.4e-73
XP_005260448 (OMIM: 606472) PREDICTED: calcium-res ( 374) 2556 274.3 3.4e-73
XP_011527069 (OMIM: 606472) PREDICTED: calcium-res ( 399) 2378 256.1 1.1e-67
NP_001288707 (OMIM: 606472) calcium-responsive tra ( 265) 1839 201.1 2.7e-51
XP_006722590 (OMIM: 600192) PREDICTED: protein SSX ( 336) 1162 132.1 2e-30
XP_011524453 (OMIM: 600192) PREDICTED: protein SSX ( 366) 1162 132.1 2.1e-30
XP_011524449 (OMIM: 600192) PREDICTED: protein SSX ( 366) 1162 132.1 2.1e-30
XP_011524452 (OMIM: 600192) PREDICTED: protein SSX ( 366) 1162 132.1 2.1e-30
XP_011524450 (OMIM: 600192) PREDICTED: protein SSX ( 366) 1162 132.1 2.1e-30
XP_011524451 (OMIM: 600192) PREDICTED: protein SSX ( 366) 1162 132.1 2.1e-30
NP_001007560 (OMIM: 600192) protein SSXT isoform 1 ( 418) 880 103.4 1.1e-21
NP_005628 (OMIM: 600192) protein SSXT isoform 2 [H ( 387) 825 97.8 4.8e-20
XP_011524447 (OMIM: 600192) PREDICTED: protein SSX ( 395) 779 93.1 1.3e-18
NP_001295130 (OMIM: 600192) protein SSXT isoform 3 ( 395) 779 93.1 1.3e-18
XP_011524454 (OMIM: 600192) PREDICTED: protein SSX ( 335) 562 70.9 5.1e-12
XP_016862038 (OMIM: 606473) PREDICTED: SS18-like p ( 77) 298 43.5 0.0002
XP_016862037 (OMIM: 606473) PREDICTED: SS18-like p ( 77) 298 43.5 0.0002
NP_057389 (OMIM: 606473) SS18-like protein 2 [Homo ( 77) 298 43.5 0.0002
>>NP_945173 (OMIM: 606472) calcium-responsive transactiv (396 aa)
initn: 2700 init1: 2700 opt: 2700 Z-score: 1514.0 bits: 289.0 E(85289): 1.4e-77
Smith-Waterman score: 2700; 100.0% identity (100.0% similar) in 396 aa overlap (1-396:1-396)
10 20 30 40 50 60
pF1KSD MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 GQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNIN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD MQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 MQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 GSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD HYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 HYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQ
310 320 330 340 350 360
370 380 390
pF1KSD GQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ
::::::::::::::::::::::::::::::::::::
NP_945 GQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ
370 380 390
>>XP_005260446 (OMIM: 606472) PREDICTED: calcium-respons (416 aa)
initn: 2907 init1: 2644 opt: 2644 Z-score: 1482.8 bits: 283.3 E(85289): 7.4e-76
Smith-Waterman score: 2644; 99.2% identity (100.0% similar) in 391 aa overlap (1-391:1-391)
10 20 30 40 50 60
pF1KSD MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNIN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD MQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD HYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQ
310 320 330 340 350 360
370 380 390
pF1KSD GQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ
::::::::::::::::::::::::::::...
XP_005 GQGQQYGSYRAPQTAPSAQQQRPYGYEQASFLDVSRCAHPPRLSRHNEDFSYGHEE
370 380 390 400 410
>>XP_016883273 (OMIM: 606472) PREDICTED: calcium-respons (373 aa)
initn: 2556 init1: 2556 opt: 2556 Z-score: 1435.0 bits: 274.3 E(85289): 3.4e-73
Smith-Waterman score: 2556; 100.0% identity (100.0% similar) in 373 aa overlap (24-396:1-373)
10 20 30 40 50 60
pF1KSD MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
:::::::::::::::::::::::::::::::::::::
XP_016 MLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
10 20 30
70 80 90 100 110 120
pF1KSD LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ
40 50 60 70 80 90
130 140 150 160 170 180
pF1KSD GQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNIN
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD MQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQ
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD GSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQ
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD HYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQ
280 290 300 310 320 330
370 380 390
pF1KSD GQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ
::::::::::::::::::::::::::::::::::::
XP_016 GQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ
340 350 360 370
>>XP_011527066 (OMIM: 606472) PREDICTED: calcium-respons (374 aa)
initn: 2556 init1: 2556 opt: 2556 Z-score: 1435.0 bits: 274.3 E(85289): 3.4e-73
Smith-Waterman score: 2556; 100.0% identity (100.0% similar) in 373 aa overlap (24-396:2-374)
10 20 30 40 50 60
pF1KSD MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
:::::::::::::::::::::::::::::::::::::
XP_011 MMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
10 20 30
70 80 90 100 110 120
pF1KSD LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ
40 50 60 70 80 90
130 140 150 160 170 180
pF1KSD GQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNIN
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD MQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQ
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD GSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQ
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD HYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQ
280 290 300 310 320 330
370 380 390
pF1KSD GQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ
::::::::::::::::::::::::::::::::::::
XP_011 GQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ
340 350 360 370
>>XP_005260448 (OMIM: 606472) PREDICTED: calcium-respons (374 aa)
initn: 2556 init1: 2556 opt: 2556 Z-score: 1435.0 bits: 274.3 E(85289): 3.4e-73
Smith-Waterman score: 2556; 100.0% identity (100.0% similar) in 373 aa overlap (24-396:2-374)
10 20 30 40 50 60
pF1KSD MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
:::::::::::::::::::::::::::::::::::::
XP_005 MMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
10 20 30
70 80 90 100 110 120
pF1KSD LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ
40 50 60 70 80 90
130 140 150 160 170 180
pF1KSD GQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNIN
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD MQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQ
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD GSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQ
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD HYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQ
280 290 300 310 320 330
370 380 390
pF1KSD GQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ
::::::::::::::::::::::::::::::::::::
XP_005 GQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ
340 350 360 370
>>XP_011527069 (OMIM: 606472) PREDICTED: calcium-respons (399 aa)
initn: 2378 init1: 2378 opt: 2378 Z-score: 1336.5 bits: 256.1 E(85289): 1.1e-67
Smith-Waterman score: 2378; 98.0% identity (98.9% similar) in 354 aa overlap (43-396:46-399)
20 30 40 50 60 70
pF1KSD KGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQ
.. .:::::::::::::::::::::::
XP_011 QHRDQISPRSPQHGGQICPRSPLHRGQICPRSPPARRYQQILHRNLVYLATIADSNQNMQ
20 30 40 50 60 70
80 90 100 110 120 130
pF1KSD SLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQGQIGNGPSHVSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQGQIGNGPSHVSM
80 90 100 110 120 130
140 150 160 170 180 190
pF1KSD QQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNINMQSNPVSMMQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNINMQSNPVSMMQQQ
140 150 160 170 180 190
200 210 220 230 240 250
pF1KSD AATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQGSSQQYLGQEEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQGSSQQYLGQEEY
200 210 220 230 240 250
260 270 280 290 300 310
pF1KSD YGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQHYYEGGNSQYSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQHYYEGGNSQYSQ
260 270 280 290 300 310
320 330 340 350 360 370
pF1KSD QQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQGQGQQYGSYRAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQGQGQQYGSYRAP
320 330 340 350 360 370
380 390
pF1KSD QTAPSAQQQRPYGYEQGQYGNYQQ
::::::::::::::::::::::::
XP_011 QTAPSAQQQRPYGYEQGQYGNYQQ
380 390
>>NP_001288707 (OMIM: 606472) calcium-responsive transac (265 aa)
initn: 1839 init1: 1839 opt: 1839 Z-score: 1041.9 bits: 201.1 E(85289): 2.7e-51
Smith-Waterman score: 1839; 100.0% identity (100.0% similar) in 265 aa overlap (132-396:1-265)
110 120 130 140 150 160
pF1KSD QGSLSDAISTGLPPSSLLQGQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQG
::::::::::::::::::::::::::::::
NP_001 MQQTAPNTLPTTSMSISGPGYSHAGPASQG
10 20 30
170 180 190 200 210 220
pF1KSD VPMQGQGTIGNYVSRTNINMQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPMQGQGTIGNYVSRTNINMQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGS
40 50 60 70 80 90
230 240 250 260 270 280
pF1KSD QGSSMMGQRPMAPYRPSQQGSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGSSMMGQRPMAPYRPSQQGSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAY
100 110 120 130 140 150
290 300 310 320 330 340
pF1KSD QQSSYTEQSYDRSFEESTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQSSYTEQSYDRSFEESTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQ
160 170 180 190 200 210
350 360 370 380 390
pF1KSD QQGYGSAQGAPSQYPGYQQGQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQGYGSAQGAPSQYPGYQQGQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ
220 230 240 250 260
>>XP_006722590 (OMIM: 600192) PREDICTED: protein SSXT is (336 aa)
initn: 795 init1: 334 opt: 1162 Z-score: 667.4 bits: 132.1 E(85289): 2e-30
Smith-Waterman score: 1225; 55.2% identity (74.8% similar) in 337 aa overlap (83-396:1-336)
60 70 80 90 100 110
pF1KSD ILHRNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTG
: .:::...::: .:.. ::.. :
XP_006 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGG
10 20 30
120 130 140 150 160
pF1KSD LPPSSLLQGQIGN---GPSHVSMQQTAPNTLPTTSMSISGP--------GYSHAGPASQG
::. .:.:... ::.:. :: .:: : :. :.. : ::.:. :.::.
XP_006 GPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQS
40 50 60 70 80 90
170 180 190 200 210
pF1KSD VPMQGQGTI------GNYVSRTNINMQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSS-I
.:.:.: :. ::: : :..:: : ::.:: ...:. :::.::::::. .
XP_006 MPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPM
100 110 120 130 140 150
220 230 240 250 260 270
pF1KSD AMMGQGSQGSSMMGQRPMAPYRPSQQGSSQQYLGQEEYYGEQYSHS-QGAAEPMGQQYYP
.:::: .::. ::::: . :::: ::: ::: :::.:::.::::. :: : :.:::::
XP_006 GMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYP
160 170 180 190 200 210
280 290 300 310 320 330
pF1KSD DGHGDYAYQQSSYTEQSYDRSFEESTQHYYEGGNSQYSQQQAGYQQGAAQQQTY--SQQQ
:::.::.::: :: ::.::: .:.:.:::::::::::.::: .:: : :: : .:::
XP_006 DGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQ-GPPPQQGYPPQQQQ
220 230 240 250 260
340 350 360 370 380
pF1KSD YPSQQSYPGQQQGYGSAQGAPS-QYPGYQQGQGQQYGSYRAPQTAP-SAQQQRPYGYEQG
::.::.::::::::: .::.:. :::.: ::::::::.:: : .: . :::::::.::
XP_006 YPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQG
270 280 290 300 310 320
390
pF1KSD QYGNYQQ
:::::::
XP_006 QYGNYQQ
330
>>XP_011524453 (OMIM: 600192) PREDICTED: protein SSXT is (366 aa)
initn: 643 init1: 334 opt: 1162 Z-score: 666.9 bits: 132.1 E(85289): 2.1e-30
Smith-Waterman score: 1408; 58.3% identity (76.6% similar) in 367 aa overlap (53-396:1-366)
30 40 50 60 70 80
pF1KSD KMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQN
.:: ::::::::::::::::::::::::::
XP_011 MLHTNLVYLATIADSNQNMQSLLPAPPTQN
10 20 30
90 100 110 120 130
pF1KSD MNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQGQIGN---GPSHVSMQQTAPNT
: .:::...::: .:.. ::.. : ::. .:.:... ::.:. :: .::
XP_011 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
40 50 60 70 80 90
140 150 160 170 180
pF1KSD LPTTSMSISGP--------GYSHAGPASQGVPMQGQGTI------GNYVSRTNINMQSNP
: :. :.. : ::.:. :.::..:.:.: :. ::: : :..:: :
XP_011 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD VSMMQQQAATSHYSSAQGGSQHYQGQSS-IAMMGQGSQGSSMMGQRPMAPYRPSQQGSSQ
::.:: ...:. :::.::::::. ..:::: .::. ::::: . :::: ::: :
XP_011 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD QYLGQEEYYGEQYSHS-QGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQHYY
:: :::.:::.::::. :: : :.::::::::.::.::: :: ::.::: .:.:.::::
XP_011 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYY
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD EGGNSQYSQQQAGYQQGAAQQQTY--SQQQYPSQQSYPGQQQGYGSAQGAPS-QYPGYQQ
:::::::.::: .:: : :: : .:::::.::.::::::::: .::.:. :::.: :
XP_011 EGGNSQYGQQQDAYQ-GPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQ
280 290 300 310 320
370 380 390
pF1KSD GQGQQYGSYRAPQTAP-SAQQQRPYGYEQGQYGNYQQ
:::::::.:: : .: . :::::::.:::::::::
XP_011 GQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
330 340 350 360
>>XP_011524449 (OMIM: 600192) PREDICTED: protein SSXT is (366 aa)
initn: 643 init1: 334 opt: 1162 Z-score: 666.9 bits: 132.1 E(85289): 2.1e-30
Smith-Waterman score: 1408; 58.3% identity (76.6% similar) in 367 aa overlap (53-396:1-366)
30 40 50 60 70 80
pF1KSD KMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQN
.:: ::::::::::::::::::::::::::
XP_011 MLHTNLVYLATIADSNQNMQSLLPAPPTQN
10 20 30
90 100 110 120 130
pF1KSD MNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQGQIGN---GPSHVSMQQTAPNT
: .:::...::: .:.. ::.. : ::. .:.:... ::.:. :: .::
XP_011 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
40 50 60 70 80 90
140 150 160 170 180
pF1KSD LPTTSMSISGP--------GYSHAGPASQGVPMQGQGTI------GNYVSRTNINMQSNP
: :. :.. : ::.:. :.::..:.:.: :. ::: : :..:: :
XP_011 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD VSMMQQQAATSHYSSAQGGSQHYQGQSS-IAMMGQGSQGSSMMGQRPMAPYRPSQQGSSQ
::.:: ...:. :::.::::::. ..:::: .::. ::::: . :::: ::: :
XP_011 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD QYLGQEEYYGEQYSHS-QGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQHYY
:: :::.:::.::::. :: : :.::::::::.::.::: :: ::.::: .:.:.::::
XP_011 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYY
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD EGGNSQYSQQQAGYQQGAAQQQTY--SQQQYPSQQSYPGQQQGYGSAQGAPS-QYPGYQQ
:::::::.::: .:: : :: : .:::::.::.::::::::: .::.:. :::.: :
XP_011 EGGNSQYGQQQDAYQ-GPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQ
280 290 300 310 320
370 380 390
pF1KSD GQGQQYGSYRAPQTAP-SAQQQRPYGYEQGQYGNYQQ
:::::::.:: : .: . :::::::.:::::::::
XP_011 GQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
330 340 350 360
396 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 02:42:50 2016 done: Thu Nov 3 02:42:51 2016
Total Scan time: 7.990 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]