Result of FASTA (ccds) for
pF1KSDA0690
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0690, 1197 aa
1>>>pF1KSDA0690 1197 - 1197 aa - 1197 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4114+/-0.0012; mu= 7.9095+/- 0.072
mean_var=178.6795+/-35.236, 0's: 0 Z-trim(107.7): 26 B-trim: 0 in 0/51
Lambda= 0.095948
statistics sampled from 9742 (9750) to 9742 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.3), width: 16
Scan time: 4.930
The best scores are: opt bits E(32554)
CCDS60605.1 RRP12 gene_id:23223|Hs108|chr10 (1197) 7793 1092.4 0
CCDS44467.1 RRP12 gene_id:23223|Hs108|chr10 (1236) 6816 957.2 0
CCDS7457.1 RRP12 gene_id:23223|Hs108|chr10 (1297) 6816 957.2 0
>>CCDS60605.1 RRP12 gene_id:23223|Hs108|chr10 (1197 aa)
initn: 7793 init1: 7793 opt: 7793 Z-score: 5838.9 bits: 1092.4 E(32554): 0
Smith-Waterman score: 7793; 99.9% identity (100.0% similar) in 1197 aa overlap (1-1197:1-1197)
10 20 30 40 50 60
pF1KSD MGRSGKLPSGVSAKLKRWKKGHSSDSNPAICRHRQAARSRFFSRPSGRSDLTVDAVKLHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MGRSGKLPSGVSAKLKRWKKGHSSDSNPAICRHRQAARSRFFSRPSGRSDLTVDAVKLHN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ELQSGSLRLGKSEAPETPMEEEAELVLTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 ELQSGSLRLGKSEAPETPMEEEAELVLTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD HKEICAVLAAVTEVIRSQGGKETETEYFAALIRKAAQHGVCSVLKGSEFMFEKAPAHHPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 HKEICAVLAAVTEVIRSQGGKETETEYFAALIRKAAQHGVCSVLKGSEFMFEKAPAHHPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD AISTAKFCIQEIEKSGGSKEATTTLHMLTLLKDLLPCFPEGLVKSCSETLLRVMTLSHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 AISTAKFCIQEIEKSGGSKEATTTLHMLTLLKDLLPCFPEGLVKSCSETLLRVMTLSHVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VTACAMQAFHSLFHARPGLSTLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 VTACAMQAFHSLFHARPGLSTLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHIN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LVRLQWDLGLGHLPRFFGTAVTCLLSPHSQVLTAATQSLKEILKECVAPHMADIGSVTSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 LVRLQWDLGLGHLPRFFGTAVTCLLSPHSQVLTAATQSLKEILKECVAPHMADIGSVTSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ASGPAQSVAKMFRAVEEGLTYKFHAAWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 ASGPAQSVAKMFRAVEEGLTYKFHAAWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCDLR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD LSPHFPHTAALDQAVGAAVTSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVQET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 LSPHFPHTAALDQAVGAAVTSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVQET
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD RLGFFTTYFLPLANTLKSKAMDLAQAGSTVESKIYDTLQWQMWTLLPGFCTRPTDVAISF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 RLGFFTTYFLPLANTLKSKAMDLAQAGSTVESKIYDTLQWQMWTLLPGFCTRPTDVAISF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD KGLARTLGMAISERPDLRVTVCQALRTLITKGCQAEADRAEVSRFAKNFLPILFNLYGQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 KGLARTLGMAISERPDLRVTVCQALRTLITKGCQAEADRAEVSRFAKNFLPILFNLYGQP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD VAAGDTPAPRRAVLETIRTYLTITDTQLVNSLLEKASEKVLDPASSDFTRLSVLDLVVAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 VAAGDTPAPRRAVLETIRTYLTITDTQLVNSLLEKASEKVLDPASSDFTRLSVLDLVVAL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD APCADEAAISKLYSTIRPYLESKAHGVQKKAYRVLEEVCASPQGPGALFVQSHLEDLKKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 APCADEAAISKLYSTIRPYLESKAHGVQKKAYRVLEEVCASPQGPGALFVQSHLEDLKKT
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD LLDSLRSTSSPAKRPRLKCLLHIVRKLSAEHKEFITALIPEVILCTKEVSVGARKNAFAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 LLDSLRSTSSPAKRPRLKCLLHIVRKLSAEHKEFITALIPEVILCTKEVSVGARKNAFAL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD LVEMGHAFLRFGSNQEEALQCYLVLIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTSTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 LVEMGHAFLRFGSNQEEALQCYLVLIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTSTV
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD EQLLENVCLLLASRTRDVVKSALGFIKVAVTVMDVAHLAKHVQLVMEAIGKLSDDMRRHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 EQLLENVCLLLASRTRDVVKSALGFIKVAVTVMDVAHLAKHVQLVMEAIGKLSDDMRRHF
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD RMKLRNLFTKFIRKFGFELVKRLLPEEYHRVLVNIRKAEARAKRHRALSQAAVEEEEEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 RMKLRNLFTKFIRKFGFELVKRLLPEEYHRVLVNIRKAEARAKRHRALSQAAVEEEEEEE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD EEEEPAQGKGDSIEEILADSEDEEDNEEEERSRGKEQRKLARQRSRAWLKEGGGDEPLNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 EEEEPAQGKGDSIEEILADSEDEEDNEEEERSRGKEQRKLARQRSRAWLKEGGGDEPLNF
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD LDPKVAQRVLATQPGPGRGRKKDHSFKVSADGRLIIREEADGNKMEEEEGAKGEDEEMAD
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
CCDS60 LDPKVAQRVLATQPGPGRGRKKDHGFKVSADGRLIIREEADGNKMEEEEGAKGEDEEMAD
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD PMEDVIIRNKKHQKLKHQKEAEEEELEIPPQYQAGGSGIHRPVAKKAMPGAEYKAKKAKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 PMEDVIIRNKKHQKLKHQKEAEEEELEIPPQYQAGGSGIHRPVAKKAMPGAEYKAKKAKG
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190
pF1KSD DVKKKGRPDPYAYIPLNRSKLNRRKKMKLQGQFKGLVKAARRGSQVGHKNRRKDRRP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 DVKKKGRPDPYAYIPLNRSKLNRRKKMKLQGQFKGLVKAARRGSQVGHKNRRKDRRP
1150 1160 1170 1180 1190
>>CCDS44467.1 RRP12 gene_id:23223|Hs108|chr10 (1236 aa)
initn: 6816 init1: 6816 opt: 6816 Z-score: 5107.8 bits: 957.2 E(32554): 0
Smith-Waterman score: 7659; 96.7% identity (96.8% similar) in 1229 aa overlap (8-1197:8-1236)
10 20 30 40 50 60
pF1KSD MGRSGKLPSGVSAKLKRWKKGHSSDSNPAICRHRQAARSRFFSRPSGRSDLTVDAVKLHN
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MGRSGKLPSGVSAKLKRWKKGHSSDSNPAICRHRQAARSRFFSRPSGRSDLTVDAVKLHN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ELQSGSLRLGKSEAPETPMEEEAELVLTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ELQSGSLRLGKSEAPETPMEEEAELVLTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAA
70 80 90 100 110 120
130 140 150
pF1KSD HKEICAVLAAVTEVIRSQGGKETETEYFAAL-----------------------------
:::::::::::::::::::::::::::::::
CCDS44 HKEICAVLAAVTEVIRSQGGKETETEYFAALVLSCLATLLRKQDLEAWGYPVTLQVYHGL
130 140 150 160 170 180
160 170 180 190 200
pF1KSD ----------IRKAAQHGVCSVLKGSEFMFEKAPAHHPAAISTAKFCIQEIEKSGGSKEA
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LSFTVHPKPKIRKAAQHGVCSVLKGSEFMFEKAPAHHPAAISTAKFCIQEIEKSGGSKEA
190 200 210 220 230 240
210 220 230 240 250 260
pF1KSD TTTLHMLTLLKDLLPCFPEGLVKSCSETLLRVMTLSHVLVTACAMQAFHSLFHARPGLST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TTTLHMLTLLKDLLPCFPEGLVKSCSETLLRVMTLSHVLVTACAMQAFHSLFHARPGLST
250 260 270 280 290 300
270 280 290 300 310 320
pF1KSD LSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQWDLGLGHLPRFFGTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQWDLGLGHLPRFFGTAV
310 320 330 340 350 360
330 340 350 360 370 380
pF1KSD TCLLSPHSQVLTAATQSLKEILKECVAPHMADIGSVTSSASGPAQSVAKMFRAVEEGLTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TCLLSPHSQVLTAATQSLKEILKECVAPHMADIGSVTSSASGPAQSVAKMFRAVEEGLTY
370 380 390 400 410 420
390 400 410 420 430 440
pF1KSD KFHAAWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCDLRLSPHFPHTAALDQAVGAAVTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KFHAAWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCDLRLSPHFPHTAALDQAVGAAVTS
430 440 450 460 470 480
450 460 470 480 490 500
pF1KSD MGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVQETRLGFFTTYFLPLANTLKSKAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVQETRLGFFTTYFLPLANTLKSKAM
490 500 510 520 530 540
510 520 530 540 550 560
pF1KSD DLAQAGSTVESKIYDTLQWQMWTLLPGFCTRPTDVAISFKGLARTLGMAISERPDLRVTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DLAQAGSTVESKIYDTLQWQMWTLLPGFCTRPTDVAISFKGLARTLGMAISERPDLRVTV
550 560 570 580 590 600
570 580 590 600 610 620
pF1KSD CQALRTLITKGCQAEADRAEVSRFAKNFLPILFNLYGQPVAAGDTPAPRRAVLETIRTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 CQALRTLITKGCQAEADRAEVSRFAKNFLPILFNLYGQPVAAGDTPAPRRAVLETIRTYL
610 620 630 640 650 660
630 640 650 660 670 680
pF1KSD TITDTQLVNSLLEKASEKVLDPASSDFTRLSVLDLVVALAPCADEAAISKLYSTIRPYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TITDTQLVNSLLEKASEKVLDPASSDFTRLSVLDLVVALAPCADEAAISKLYSTIRPYLE
670 680 690 700 710 720
690 700 710 720 730 740
pF1KSD SKAHGVQKKAYRVLEEVCASPQGPGALFVQSHLEDLKKTLLDSLRSTSSPAKRPRLKCLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SKAHGVQKKAYRVLEEVCASPQGPGALFVQSHLEDLKKTLLDSLRSTSSPAKRPRLKCLL
730 740 750 760 770 780
750 760 770 780 790 800
pF1KSD HIVRKLSAEHKEFITALIPEVILCTKEVSVGARKNAFALLVEMGHAFLRFGSNQEEALQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HIVRKLSAEHKEFITALIPEVILCTKEVSVGARKNAFALLVEMGHAFLRFGSNQEEALQC
790 800 810 820 830 840
810 820 830 840 850 860
pF1KSD YLVLIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVVKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 YLVLIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVVKS
850 860 870 880 890 900
870 880 890 900 910 920
pF1KSD ALGFIKVAVTVMDVAHLAKHVQLVMEAIGKLSDDMRRHFRMKLRNLFTKFIRKFGFELVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ALGFIKVAVTVMDVAHLAKHVQLVMEAIGKLSDDMRRHFRMKLRNLFTKFIRKFGFELVK
910 920 930 940 950 960
930 940 950 960 970 980
pF1KSD RLLPEEYHRVLVNIRKAEARAKRHRALSQAAVEEEEEEEEEEEPAQGKGDSIEEILADSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RLLPEEYHRVLVNIRKAEARAKRHRALSQAAVEEEEEEEEEEEPAQGKGDSIEEILADSE
970 980 990 1000 1010 1020
990 1000 1010 1020 1030 1040
pF1KSD DEEDNEEEERSRGKEQRKLARQRSRAWLKEGGGDEPLNFLDPKVAQRVLATQPGPGRGRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DEEDNEEEERSRGKEQRKLARQRSRAWLKEGGGDEPLNFLDPKVAQRVLATQPGPGRGRK
1030 1040 1050 1060 1070 1080
1050 1060 1070 1080 1090 1100
pF1KSD KDHSFKVSADGRLIIREEADGNKMEEEEGAKGEDEEMADPMEDVIIRNKKHQKLKHQKEA
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KDHGFKVSADGRLIIREEADGNKMEEEEGAKGEDEEMADPMEDVIIRNKKHQKLKHQKEA
1090 1100 1110 1120 1130 1140
1110 1120 1130 1140 1150 1160
pF1KSD EEEELEIPPQYQAGGSGIHRPVAKKAMPGAEYKAKKAKGDVKKKGRPDPYAYIPLNRSKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EEEELEIPPQYQAGGSGIHRPVAKKAMPGAEYKAKKAKGDVKKKGRPDPYAYIPLNRSKL
1150 1160 1170 1180 1190 1200
1170 1180 1190
pF1KSD NRRKKMKLQGQFKGLVKAARRGSQVGHKNRRKDRRP
::::::::::::::::::::::::::::::::::::
CCDS44 NRRKKMKLQGQFKGLVKAARRGSQVGHKNRRKDRRP
1210 1220 1230
>>CCDS7457.1 RRP12 gene_id:23223|Hs108|chr10 (1297 aa)
initn: 6816 init1: 6816 opt: 6816 Z-score: 5107.5 bits: 957.2 E(32554): 0
Smith-Waterman score: 7127; 91.8% identity (91.9% similar) in 1229 aa overlap (69-1197:69-1297)
40 50 60 70 80 90
pF1KSD SRFFSRPSGRSDLTVDAVKLHNELQSGSLRLGKSEAPETPMEEEAELVLTEKSSGTFLSG
::::::::::::::::::::::::::::::
CCDS74 SRFFSRPSGRSDLTVDAVKLHNELQSGSLRLGKSEAPETPMEEEAELVLTEKSSGTFLSG
40 50 60 70 80 90
100 110 120 130 140 150
pF1KSD LSDCTNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGGKETETEYFAAL-------
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LSDCTNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAV
100 110 120 130 140 150
pF1KSD ------------------------------------------------------------
CCDS74 ESPESLAAVAYLLNLVLKRVPSPVLIKKFSDTSKAFMDIMSAQASSGSTSVLRWVLSCLA
160 170 180 190 200 210
160 170
pF1KSD ---------------------------------IRKAAQHGVCSVLKGSEFMFEKAPAHH
:::::::::::::::::::::::::::
CCDS74 TLLRKQDLEAWGYPVTLQVYHGLLSFTVHPKPKIRKAAQHGVCSVLKGSEFMFEKAPAHH
220 230 240 250 260 270
180 190 200 210 220 230
pF1KSD PAAISTAKFCIQEIEKSGGSKEATTTLHMLTLLKDLLPCFPEGLVKSCSETLLRVMTLSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PAAISTAKFCIQEIEKSGGSKEATTTLHMLTLLKDLLPCFPEGLVKSCSETLLRVMTLSH
280 290 300 310 320 330
240 250 260 270 280 290
pF1KSD VLVTACAMQAFHSLFHARPGLSTLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VLVTACAMQAFHSLFHARPGLSTLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAH
340 350 360 370 380 390
300 310 320 330 340 350
pF1KSD INLVRLQWDLGLGHLPRFFGTAVTCLLSPHSQVLTAATQSLKEILKECVAPHMADIGSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 INLVRLQWDLGLGHLPRFFGTAVTCLLSPHSQVLTAATQSLKEILKECVAPHMADIGSVT
400 410 420 430 440 450
360 370 380 390 400 410
pF1KSD SSASGPAQSVAKMFRAVEEGLTYKFHAAWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SSASGPAQSVAKMFRAVEEGLTYKFHAAWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCD
460 470 480 490 500 510
420 430 440 450 460 470
pF1KSD LRLSPHFPHTAALDQAVGAAVTSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LRLSPHFPHTAALDQAVGAAVTSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVQ
520 530 540 550 560 570
480 490 500 510 520 530
pF1KSD ETRLGFFTTYFLPLANTLKSKAMDLAQAGSTVESKIYDTLQWQMWTLLPGFCTRPTDVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 ETRLGFFTTYFLPLANTLKSKAMDLAQAGSTVESKIYDTLQWQMWTLLPGFCTRPTDVAI
580 590 600 610 620 630
540 550 560 570 580 590
pF1KSD SFKGLARTLGMAISERPDLRVTVCQALRTLITKGCQAEADRAEVSRFAKNFLPILFNLYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SFKGLARTLGMAISERPDLRVTVCQALRTLITKGCQAEADRAEVSRFAKNFLPILFNLYG
640 650 660 670 680 690
600 610 620 630 640 650
pF1KSD QPVAAGDTPAPRRAVLETIRTYLTITDTQLVNSLLEKASEKVLDPASSDFTRLSVLDLVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 QPVAAGDTPAPRRAVLETIRTYLTITDTQLVNSLLEKASEKVLDPASSDFTRLSVLDLVV
700 710 720 730 740 750
660 670 680 690 700 710
pF1KSD ALAPCADEAAISKLYSTIRPYLESKAHGVQKKAYRVLEEVCASPQGPGALFVQSHLEDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 ALAPCADEAAISKLYSTIRPYLESKAHGVQKKAYRVLEEVCASPQGPGALFVQSHLEDLK
760 770 780 790 800 810
720 730 740 750 760 770
pF1KSD KTLLDSLRSTSSPAKRPRLKCLLHIVRKLSAEHKEFITALIPEVILCTKEVSVGARKNAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KTLLDSLRSTSSPAKRPRLKCLLHIVRKLSAEHKEFITALIPEVILCTKEVSVGARKNAF
820 830 840 850 860 870
780 790 800 810 820 830
pF1KSD ALLVEMGHAFLRFGSNQEEALQCYLVLIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 ALLVEMGHAFLRFGSNQEEALQCYLVLIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTS
880 890 900 910 920 930
840 850 860 870 880 890
pF1KSD TVEQLLENVCLLLASRTRDVVKSALGFIKVAVTVMDVAHLAKHVQLVMEAIGKLSDDMRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 TVEQLLENVCLLLASRTRDVVKSALGFIKVAVTVMDVAHLAKHVQLVMEAIGKLSDDMRR
940 950 960 970 980 990
900 910 920 930 940 950
pF1KSD HFRMKLRNLFTKFIRKFGFELVKRLLPEEYHRVLVNIRKAEARAKRHRALSQAAVEEEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 HFRMKLRNLFTKFIRKFGFELVKRLLPEEYHRVLVNIRKAEARAKRHRALSQAAVEEEEE
1000 1010 1020 1030 1040 1050
960 970 980 990 1000 1010
pF1KSD EEEEEEPAQGKGDSIEEILADSEDEEDNEEEERSRGKEQRKLARQRSRAWLKEGGGDEPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 EEEEEEPAQGKGDSIEEILADSEDEEDNEEEERSRGKEQRKLARQRSRAWLKEGGGDEPL
1060 1070 1080 1090 1100 1110
1020 1030 1040 1050 1060 1070
pF1KSD NFLDPKVAQRVLATQPGPGRGRKKDHSFKVSADGRLIIREEADGNKMEEEEGAKGEDEEM
::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
CCDS74 NFLDPKVAQRVLATQPGPGRGRKKDHGFKVSADGRLIIREEADGNKMEEEEGAKGEDEEM
1120 1130 1140 1150 1160 1170
1080 1090 1100 1110 1120 1130
pF1KSD ADPMEDVIIRNKKHQKLKHQKEAEEEELEIPPQYQAGGSGIHRPVAKKAMPGAEYKAKKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 ADPMEDVIIRNKKHQKLKHQKEAEEEELEIPPQYQAGGSGIHRPVAKKAMPGAEYKAKKA
1180 1190 1200 1210 1220 1230
1140 1150 1160 1170 1180 1190
pF1KSD KGDVKKKGRPDPYAYIPLNRSKLNRRKKMKLQGQFKGLVKAARRGSQVGHKNRRKDRRP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KGDVKKKGRPDPYAYIPLNRSKLNRRKKMKLQGQFKGLVKAARRGSQVGHKNRRKDRRP
1240 1250 1260 1270 1280 1290
>--
initn: 456 init1: 456 opt: 456 Z-score: 349.5 bits: 76.8 E(32554): 3.8e-13
Smith-Waterman score: 456; 100.0% identity (100.0% similar) in 68 aa overlap (1-68:1-68)
10 20 30 40 50 60
pF1KSD MGRSGKLPSGVSAKLKRWKKGHSSDSNPAICRHRQAARSRFFSRPSGRSDLTVDAVKLHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MGRSGKLPSGVSAKLKRWKKGHSSDSNPAICRHRQAARSRFFSRPSGRSDLTVDAVKLHN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ELQSGSLRLGKSEAPETPMEEEAELVLTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAA
::::::::
CCDS74 ELQSGSLRLGKSEAPETPMEEEAELVLTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAA
70 80 90 100 110 120
1197 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 02:42:11 2016 done: Thu Nov 3 02:42:12 2016
Total Scan time: 4.930 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]