Result of FASTA (ccds) for
pF1KSDA0532
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0532, 1507 aa
1>>>pF1KSDA0532 1507 - 1507 aa - 1507 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4560+/-0.00108; mu= 22.7657+/- 0.065
mean_var=69.9216+/-13.773, 0's: 0 Z-trim(102.9): 24 B-trim: 407 in 1/51
Lambda= 0.153380
statistics sampled from 7128 (7143) to 7128 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.574), E-opt: 0.2 (0.219), width: 16
Scan time: 4.990
The best scores are: opt bits E(32554)
CCDS6281.1 VPS13B gene_id:157680|Hs108|chr8 (3997) 10145 2255.4 0
CCDS6280.1 VPS13B gene_id:157680|Hs108|chr8 (4022) 10145 2255.4 0
CCDS58367.1 VPS13C gene_id:54832|Hs108|chr15 (3585) 310 79.1 2.8e-13
CCDS45272.1 VPS13C gene_id:54832|Hs108|chr15 (3628) 310 79.1 2.8e-13
CCDS10180.1 VPS13C gene_id:54832|Hs108|chr15 (3710) 310 79.1 2.9e-13
CCDS32257.1 VPS13C gene_id:54832|Hs108|chr15 (3753) 310 79.1 2.9e-13
CCDS47983.1 VPS13A gene_id:23230|Hs108|chr9 (3069) 308 78.6 3.3e-13
CCDS6656.1 VPS13A gene_id:23230|Hs108|chr9 (3095) 308 78.6 3.3e-13
CCDS55321.1 VPS13A gene_id:23230|Hs108|chr9 (3135) 308 78.6 3.4e-13
CCDS6655.1 VPS13A gene_id:23230|Hs108|chr9 (3174) 308 78.6 3.4e-13
>>CCDS6281.1 VPS13B gene_id:157680|Hs108|chr8 (3997 aa)
initn: 10145 init1: 10145 opt: 10145 Z-score: 12112.9 bits: 2255.4 E(32554): 0
Smith-Waterman score: 10145; 100.0% identity (100.0% similar) in 1507 aa overlap (1-1507:2491-3997)
10 20 30
pF1KSD MPSELEYMIVSFREPHMYLRQWNNGSVCQE
::::::::::::::::::::::::::::::
CCDS62 AHLEFHLCHHLDQLGTAAPQYLQPFVSDRNMPSELEYMIVSFREPHMYLRQWNNGSVCQE
2470 2480 2490 2500 2510 2520
40 50 60 70 80 90
pF1KSD IQFLAQADCKLLECRNVTMQSVVKPFSIFGQMAVSSDVVEKLLDCTVIVDSVFVNLGQHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 IQFLAQADCKLLECRNVTMQSVVKPFSIFGQMAVSSDVVEKLLDCTVIVDSVFVNLGQHV
2530 2540 2550 2560 2570 2580
100 110 120 130 140 150
pF1KSD VHSLNTAIQAWQQNKCPEVEELVFSHFVICNDTQETLRFGQVDTDENILLASLHSHQYSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 VHSLNTAIQAWQQNKCPEVEELVFSHFVICNDTQETLRFGQVDTDENILLASLHSHQYSW
2590 2600 2610 2620 2630 2640
160 170 180 190 200 210
pF1KSD RSHKSPQLLHICIEGWGNWRWSEPFSVDHAGTFIRTIQYRGRTASLIIKVQQLNGVQKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 RSHKSPQLLHICIEGWGNWRWSEPFSVDHAGTFIRTIQYRGRTASLIIKVQQLNGVQKQI
2650 2660 2670 2680 2690 2700
220 230 240 250 260 270
pF1KSD IICGRQIICSYLSQSIELKVVQHYIGQDGQAVVREHFDCLTAKQKLPSYILENNELTELC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 IICGRQIICSYLSQSIELKVVQHYIGQDGQAVVREHFDCLTAKQKLPSYILENNELTELC
2710 2720 2730 2740 2750 2760
280 290 300 310 320 330
pF1KSD VKAKGDEDWSRDVCLESKAPEYSIVIQVPSSNSSIIYVWCTVLTLEPNSQVQQRMIVFSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 VKAKGDEDWSRDVCLESKAPEYSIVIQVPSSNSSIIYVWCTVLTLEPNSQVQQRMIVFSP
2770 2780 2790 2800 2810 2820
340 350 360 370 380 390
pF1KSD LFIMRSHLPDPIIIHLEKRSLGLSETQIIPGKGQEKPLQNIEPDLVHHLTFQAREEYDPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LFIMRSHLPDPIIIHLEKRSLGLSETQIIPGKGQEKPLQNIEPDLVHHLTFQAREEYDPS
2830 2840 2850 2860 2870 2880
400 410 420 430 440 450
pF1KSD DCAVPISTSLIKQIATKVHPGGTVNQILDEFYGPEKSLQPIWPYNKKDSDRNEQLSQWDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 DCAVPISTSLIKQIATKVHPGGTVNQILDEFYGPEKSLQPIWPYNKKDSDRNEQLSQWDS
2890 2900 2910 2920 2930 2940
460 470 480 490 500 510
pF1KSD PMRVKLSIWKPYVRTLLIELLPWALLINESKWDLWLFEGEKIVLQVPAGKIIIPPNFQEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PMRVKLSIWKPYVRTLLIELLPWALLINESKWDLWLFEGEKIVLQVPAGKIIIPPNFQEA
2950 2960 2970 2980 2990 3000
520 530 540 550 560 570
pF1KSD FQIGIYWANTNTVHKSVAIKLVHNLTSPKWKDGGNGEVVTLDEEAFVDTEIRLGAFPGHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 FQIGIYWANTNTVHKSVAIKLVHNLTSPKWKDGGNGEVVTLDEEAFVDTEIRLGAFPGHQ
3010 3020 3030 3040 3050 3060
580 590 600 610 620 630
pF1KSD KLCQFCISSMVQQGIQIIQIEDKTTIINNTPYQIFYKPQLSVCNPHSGKEYFRVPDSATF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 KLCQFCISSMVQQGIQIIQIEDKTTIINNTPYQIFYKPQLSVCNPHSGKEYFRVPDSATF
3070 3080 3090 3100 3110 3120
640 650 660 670 680 690
pF1KSD SICPGGEQPAMKSSSLPCWDLMPDISQSVLDASLLQKQIMLGFSPAPGADSSQCWSLPAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 SICPGGEQPAMKSSSLPCWDLMPDISQSVLDASLLQKQIMLGFSPAPGADSSQCWSLPAI
3130 3140 3150 3160 3170 3180
700 710 720 730 740 750
pF1KSD VRPEFPRQSVAVPLGNFRENGFCTRAIVLTYQEHLGVTYLTLSEDPSPRVIIHNRCPVKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 VRPEFPRQSVAVPLGNFRENGFCTRAIVLTYQEHLGVTYLTLSEDPSPRVIIHNRCPVKM
3190 3200 3210 3220 3230 3240
760 770 780 790 800 810
pF1KSD LIKENIKDIPKFEVYCKKIPSECSIHHELYHQISSYPDCKTKDLLPSLLLRVEPLDEVTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LIKENIKDIPKFEVYCKKIPSECSIHHELYHQISSYPDCKTKDLLPSLLLRVEPLDEVTT
3250 3260 3270 3280 3290 3300
820 830 840 850 860 870
pF1KSD EWSDAIDINSQGTQVVFLTGFGYVYVDVVHQCGTVFITVAPEGKAGPILTNTNRAPEKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 EWSDAIDINSQGTQVVFLTGFGYVYVDVVHQCGTVFITVAPEGKAGPILTNTNRAPEKIV
3310 3320 3330 3340 3350 3360
880 890 900 910 920 930
pF1KSD TFKMFITQLSLAVFDDLTHHKASAELLRLTLDNIFLCVAPGAGPLPGEEPVAALFELYCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 TFKMFITQLSLAVFDDLTHHKASAELLRLTLDNIFLCVAPGAGPLPGEEPVAALFELYCV
3370 3380 3390 3400 3410 3420
940 950 960 970 980 990
pF1KSD EICCGDLQLDNQLYNKSNFHFAVLVCQGEKAEPIQCSKMQSLLISNKELEEYKEKCFIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 EICCGDLQLDNQLYNKSNFHFAVLVCQGEKAEPIQCSKMQSLLISNKELEEYKEKCFIKL
3430 3440 3450 3460 3470 3480
1000 1010 1020 1030 1040 1050
pF1KSD CITLNEGKSILCDINEFSFELKPARLYVEDTFVYYIKTLFDTYLPNSRLAGHSTHLSGGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 CITLNEGKSILCDINEFSFELKPARLYVEDTFVYYIKTLFDTYLPNSRLAGHSTHLSGGK
3490 3500 3510 3520 3530 3540
1060 1070 1080 1090 1100 1110
pF1KSD QVLPMQVTQHARALVNPVKLRKLVIQPVNLLVSIHASLKLYIASDHTPLSFSVFERGPIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 QVLPMQVTQHARALVNPVKLRKLVIQPVNLLVSIHASLKLYIASDHTPLSFSVFERGPIF
3550 3560 3570 3580 3590 3600
1120 1130 1140 1150 1160 1170
pF1KSD TTARQLVHALAMHYAAGALFRAGWVVGSLDILGSPASLVRSIGNGVADFFRLPYEGLTRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 TTARQLVHALAMHYAAGALFRAGWVVGSLDILGSPASLVRSIGNGVADFFRLPYEGLTRG
3610 3620 3630 3640 3650 3660
1180 1190 1200 1210 1220 1230
pF1KSD PGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMDRLSLDEEHYNRQEEWRRQLPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMDRLSLDEEHYNRQEEWRRQLPE
3670 3680 3690 3700 3710 3720
1240 1250 1260 1270 1280 1290
pF1KSD SLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQASAGHKAKGVISGVGKGIMGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 SLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQASAGHKAKGVISGVGKGIMGV
3730 3740 3750 3760 3770 3780
1300 1310 1320 1330 1340 1350
pF1KSD FTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLHADQAPNSHVKYVWKMLQSLGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 FTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLHADQAPNSHVKYVWKMLQSLGR
3790 3800 3810 3820 3830 3840
1360 1370 1380 1390 1400 1410
pF1KSD PEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSVSEDTQQQAFPVTEIDCAQDSKQNNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSVSEDTQQQAFPVTEIDCAQDSKQNNL
3850 3860 3870 3880 3890 3900
1420 1430 1440 1450 1460 1470
pF1KSD LTVQLKQPRVACDVEVDGVRERLSEQQYNRLVDYITKTSCHLAPSCSSMQIPCPVVAAEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LTVQLKQPRVACDVEVDGVRERLSEQQYNRLVDYITKTSCHLAPSCSSMQIPCPVVAAEP
3910 3920 3930 3940 3950 3960
1480 1490 1500
pF1KSD PPSTVKTYHYLVDPHFAQVFLSKFTMVKNKALRKGFP
:::::::::::::::::::::::::::::::::::::
CCDS62 PPSTVKTYHYLVDPHFAQVFLSKFTMVKNKALRKGFP
3970 3980 3990
>>CCDS6280.1 VPS13B gene_id:157680|Hs108|chr8 (4022 aa)
initn: 10145 init1: 10145 opt: 10145 Z-score: 12112.8 bits: 2255.4 E(32554): 0
Smith-Waterman score: 10145; 100.0% identity (100.0% similar) in 1507 aa overlap (1-1507:2516-4022)
10 20 30
pF1KSD MPSELEYMIVSFREPHMYLRQWNNGSVCQE
::::::::::::::::::::::::::::::
CCDS62 AHLEFHLCHHLDQLGTAAPQYLQPFVSDRNMPSELEYMIVSFREPHMYLRQWNNGSVCQE
2490 2500 2510 2520 2530 2540
40 50 60 70 80 90
pF1KSD IQFLAQADCKLLECRNVTMQSVVKPFSIFGQMAVSSDVVEKLLDCTVIVDSVFVNLGQHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 IQFLAQADCKLLECRNVTMQSVVKPFSIFGQMAVSSDVVEKLLDCTVIVDSVFVNLGQHV
2550 2560 2570 2580 2590 2600
100 110 120 130 140 150
pF1KSD VHSLNTAIQAWQQNKCPEVEELVFSHFVICNDTQETLRFGQVDTDENILLASLHSHQYSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 VHSLNTAIQAWQQNKCPEVEELVFSHFVICNDTQETLRFGQVDTDENILLASLHSHQYSW
2610 2620 2630 2640 2650 2660
160 170 180 190 200 210
pF1KSD RSHKSPQLLHICIEGWGNWRWSEPFSVDHAGTFIRTIQYRGRTASLIIKVQQLNGVQKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 RSHKSPQLLHICIEGWGNWRWSEPFSVDHAGTFIRTIQYRGRTASLIIKVQQLNGVQKQI
2670 2680 2690 2700 2710 2720
220 230 240 250 260 270
pF1KSD IICGRQIICSYLSQSIELKVVQHYIGQDGQAVVREHFDCLTAKQKLPSYILENNELTELC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 IICGRQIICSYLSQSIELKVVQHYIGQDGQAVVREHFDCLTAKQKLPSYILENNELTELC
2730 2740 2750 2760 2770 2780
280 290 300 310 320 330
pF1KSD VKAKGDEDWSRDVCLESKAPEYSIVIQVPSSNSSIIYVWCTVLTLEPNSQVQQRMIVFSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 VKAKGDEDWSRDVCLESKAPEYSIVIQVPSSNSSIIYVWCTVLTLEPNSQVQQRMIVFSP
2790 2800 2810 2820 2830 2840
340 350 360 370 380 390
pF1KSD LFIMRSHLPDPIIIHLEKRSLGLSETQIIPGKGQEKPLQNIEPDLVHHLTFQAREEYDPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LFIMRSHLPDPIIIHLEKRSLGLSETQIIPGKGQEKPLQNIEPDLVHHLTFQAREEYDPS
2850 2860 2870 2880 2890 2900
400 410 420 430 440 450
pF1KSD DCAVPISTSLIKQIATKVHPGGTVNQILDEFYGPEKSLQPIWPYNKKDSDRNEQLSQWDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 DCAVPISTSLIKQIATKVHPGGTVNQILDEFYGPEKSLQPIWPYNKKDSDRNEQLSQWDS
2910 2920 2930 2940 2950 2960
460 470 480 490 500 510
pF1KSD PMRVKLSIWKPYVRTLLIELLPWALLINESKWDLWLFEGEKIVLQVPAGKIIIPPNFQEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PMRVKLSIWKPYVRTLLIELLPWALLINESKWDLWLFEGEKIVLQVPAGKIIIPPNFQEA
2970 2980 2990 3000 3010 3020
520 530 540 550 560 570
pF1KSD FQIGIYWANTNTVHKSVAIKLVHNLTSPKWKDGGNGEVVTLDEEAFVDTEIRLGAFPGHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 FQIGIYWANTNTVHKSVAIKLVHNLTSPKWKDGGNGEVVTLDEEAFVDTEIRLGAFPGHQ
3030 3040 3050 3060 3070 3080
580 590 600 610 620 630
pF1KSD KLCQFCISSMVQQGIQIIQIEDKTTIINNTPYQIFYKPQLSVCNPHSGKEYFRVPDSATF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 KLCQFCISSMVQQGIQIIQIEDKTTIINNTPYQIFYKPQLSVCNPHSGKEYFRVPDSATF
3090 3100 3110 3120 3130 3140
640 650 660 670 680 690
pF1KSD SICPGGEQPAMKSSSLPCWDLMPDISQSVLDASLLQKQIMLGFSPAPGADSSQCWSLPAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 SICPGGEQPAMKSSSLPCWDLMPDISQSVLDASLLQKQIMLGFSPAPGADSSQCWSLPAI
3150 3160 3170 3180 3190 3200
700 710 720 730 740 750
pF1KSD VRPEFPRQSVAVPLGNFRENGFCTRAIVLTYQEHLGVTYLTLSEDPSPRVIIHNRCPVKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 VRPEFPRQSVAVPLGNFRENGFCTRAIVLTYQEHLGVTYLTLSEDPSPRVIIHNRCPVKM
3210 3220 3230 3240 3250 3260
760 770 780 790 800 810
pF1KSD LIKENIKDIPKFEVYCKKIPSECSIHHELYHQISSYPDCKTKDLLPSLLLRVEPLDEVTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LIKENIKDIPKFEVYCKKIPSECSIHHELYHQISSYPDCKTKDLLPSLLLRVEPLDEVTT
3270 3280 3290 3300 3310 3320
820 830 840 850 860 870
pF1KSD EWSDAIDINSQGTQVVFLTGFGYVYVDVVHQCGTVFITVAPEGKAGPILTNTNRAPEKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 EWSDAIDINSQGTQVVFLTGFGYVYVDVVHQCGTVFITVAPEGKAGPILTNTNRAPEKIV
3330 3340 3350 3360 3370 3380
880 890 900 910 920 930
pF1KSD TFKMFITQLSLAVFDDLTHHKASAELLRLTLDNIFLCVAPGAGPLPGEEPVAALFELYCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 TFKMFITQLSLAVFDDLTHHKASAELLRLTLDNIFLCVAPGAGPLPGEEPVAALFELYCV
3390 3400 3410 3420 3430 3440
940 950 960 970 980 990
pF1KSD EICCGDLQLDNQLYNKSNFHFAVLVCQGEKAEPIQCSKMQSLLISNKELEEYKEKCFIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 EICCGDLQLDNQLYNKSNFHFAVLVCQGEKAEPIQCSKMQSLLISNKELEEYKEKCFIKL
3450 3460 3470 3480 3490 3500
1000 1010 1020 1030 1040 1050
pF1KSD CITLNEGKSILCDINEFSFELKPARLYVEDTFVYYIKTLFDTYLPNSRLAGHSTHLSGGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 CITLNEGKSILCDINEFSFELKPARLYVEDTFVYYIKTLFDTYLPNSRLAGHSTHLSGGK
3510 3520 3530 3540 3550 3560
1060 1070 1080 1090 1100 1110
pF1KSD QVLPMQVTQHARALVNPVKLRKLVIQPVNLLVSIHASLKLYIASDHTPLSFSVFERGPIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 QVLPMQVTQHARALVNPVKLRKLVIQPVNLLVSIHASLKLYIASDHTPLSFSVFERGPIF
3570 3580 3590 3600 3610 3620
1120 1130 1140 1150 1160 1170
pF1KSD TTARQLVHALAMHYAAGALFRAGWVVGSLDILGSPASLVRSIGNGVADFFRLPYEGLTRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 TTARQLVHALAMHYAAGALFRAGWVVGSLDILGSPASLVRSIGNGVADFFRLPYEGLTRG
3630 3640 3650 3660 3670 3680
1180 1190 1200 1210 1220 1230
pF1KSD PGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMDRLSLDEEHYNRQEEWRRQLPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMDRLSLDEEHYNRQEEWRRQLPE
3690 3700 3710 3720 3730 3740
1240 1250 1260 1270 1280 1290
pF1KSD SLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQASAGHKAKGVISGVGKGIMGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 SLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQASAGHKAKGVISGVGKGIMGV
3750 3760 3770 3780 3790 3800
1300 1310 1320 1330 1340 1350
pF1KSD FTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLHADQAPNSHVKYVWKMLQSLGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 FTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLHADQAPNSHVKYVWKMLQSLGR
3810 3820 3830 3840 3850 3860
1360 1370 1380 1390 1400 1410
pF1KSD PEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSVSEDTQQQAFPVTEIDCAQDSKQNNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 PEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSVSEDTQQQAFPVTEIDCAQDSKQNNL
3870 3880 3890 3900 3910 3920
1420 1430 1440 1450 1460 1470
pF1KSD LTVQLKQPRVACDVEVDGVRERLSEQQYNRLVDYITKTSCHLAPSCSSMQIPCPVVAAEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LTVQLKQPRVACDVEVDGVRERLSEQQYNRLVDYITKTSCHLAPSCSSMQIPCPVVAAEP
3930 3940 3950 3960 3970 3980
1480 1490 1500
pF1KSD PPSTVKTYHYLVDPHFAQVFLSKFTMVKNKALRKGFP
:::::::::::::::::::::::::::::::::::::
CCDS62 PPSTVKTYHYLVDPHFAQVFLSKFTMVKNKALRKGFP
3990 4000 4010 4020
>>CCDS58367.1 VPS13C gene_id:54832|Hs108|chr15 (3585 aa)
initn: 325 init1: 147 opt: 310 Z-score: 351.9 bits: 79.1 E(32554): 2.8e-13
Smith-Waterman score: 381; 27.5% identity (63.8% similar) in 265 aa overlap (1069-1331:3309-3560)
1040 1050 1060 1070 1080 1090
pF1KSD LAGHSTHLSGGKQVLPMQVTQHARALVNPVKLRKLVIQPVNLLV-SIHASLKLYIASDHT
: . .... ::::. :: :.: :
CCDS58 LSFFEHFHISPVKLHLSLSLGSGGEESDKEKQEMFAVHSVNLLLKSIGATLT---DVDDL
3280 3290 3300 3310 3320 3330
1100 1110 1120 1130 1140 1150
pF1KSD PLSFSVFERGPIFTTARQLVHALAMHYAAGALFRAGWVVGSLDILGSPASLVRSIGNGVA
.... .: : ::. ... ::. : . .: .::.::.: .:.:....::
CCDS58 IFKLAYYEIRYQFYKRDQLIWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVE
3340 3350 3360 3370 3380 3390
1160 1170 1180 1190 1200 1210
pF1KSD DFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMDRLSLDEEH
.: :..: ..:: :. :. :. :. : :. .. .. :..... ...:.:.
CCDS58 ALFYEPFQGAVQGPEEFAEGLVIGVRSLFGHTVGGAAGVVSRITGSVGKGLAAITMDKEY
3400 3410 3420 3430 3440 3450
1220 1230 1240 1250 1260 1270
pF1KSD YN-RQEEWRRQLPESLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQASAGHKA
. :.:: :: :...:..: .: . . ...:...::. .:... .: . :
CCDS58 QQKRREELSRQ-PRDFGDSLARGGKGFLRGVVGGVTGIITKPVEGAKKEGAA--------
3460 3470 3480 3490 3500
1280 1290 1300 1310 1320 1330
pF1KSD KGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLHADQAPNS
: ..:.:::..:. ..: :: ....:.: :: ..: .. .. . : .: :
CCDS58 -GFFKGIGKGLVGAVARPTGGIVDMASSTFQGIQRAAESTEEVSSLRPPRLIHEDGIIRP
3510 3520 3530 3540 3550 3560
1340 1350 1360 1370 1380 1390
pF1KSD HVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSVSEDTQQQAFPV
CCDS58 YDRQESEGSDLLEQELEIQE
3570 3580
>>CCDS45272.1 VPS13C gene_id:54832|Hs108|chr15 (3628 aa)
initn: 325 init1: 147 opt: 310 Z-score: 351.8 bits: 79.1 E(32554): 2.8e-13
Smith-Waterman score: 381; 27.5% identity (63.8% similar) in 265 aa overlap (1069-1331:3352-3603)
1040 1050 1060 1070 1080 1090
pF1KSD LAGHSTHLSGGKQVLPMQVTQHARALVNPVKLRKLVIQPVNLLV-SIHASLKLYIASDHT
: . .... ::::. :: :.: :
CCDS45 LSFFEHFHISPVKLHLSLSLGSGGEESDKEKQEMFAVHSVNLLLKSIGATLT---DVDDL
3330 3340 3350 3360 3370
1100 1110 1120 1130 1140 1150
pF1KSD PLSFSVFERGPIFTTARQLVHALAMHYAAGALFRAGWVVGSLDILGSPASLVRSIGNGVA
.... .: : ::. ... ::. : . .: .::.::.: .:.:....::
CCDS45 IFKLAYYEIRYQFYKRDQLIWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVE
3380 3390 3400 3410 3420 3430
1160 1170 1180 1190 1200 1210
pF1KSD DFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMDRLSLDEEH
.: :..: ..:: :. :. :. :. : :. .. .. :..... ...:.:.
CCDS45 ALFYEPFQGAVQGPEEFAEGLVIGVRSLFGHTVGGAAGVVSRITGSVGKGLAAITMDKEY
3440 3450 3460 3470 3480 3490
1220 1230 1240 1250 1260 1270
pF1KSD YN-RQEEWRRQLPESLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQASAGHKA
. :.:: :: :...:..: .: . . ...:...::. .:... .: . :
CCDS45 QQKRREELSRQ-PRDFGDSLARGGKGFLRGVVGGVTGIITKPVEGAKKEGAA--------
3500 3510 3520 3530 3540
1280 1290 1300 1310 1320 1330
pF1KSD KGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLHADQAPNS
: ..:.:::..:. ..: :: ....:.: :: ..: .. .. . : .: :
CCDS45 -GFFKGIGKGLVGAVARPTGGIVDMASSTFQGIQRAAESTEEVSSLRPPRLIHEDGIIRP
3550 3560 3570 3580 3590 3600
1340 1350 1360 1370 1380 1390
pF1KSD HVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSVSEDTQQQAFPV
CCDS45 YDRQESEGSDLLEQELEIQE
3610 3620
>>CCDS10180.1 VPS13C gene_id:54832|Hs108|chr15 (3710 aa)
initn: 254 init1: 147 opt: 310 Z-score: 351.7 bits: 79.1 E(32554): 2.9e-13
Smith-Waterman score: 381; 27.5% identity (63.8% similar) in 265 aa overlap (1069-1331:3309-3560)
1040 1050 1060 1070 1080 1090
pF1KSD LAGHSTHLSGGKQVLPMQVTQHARALVNPVKLRKLVIQPVNLLV-SIHASLKLYIASDHT
: . .... ::::. :: :.: :
CCDS10 LSFFEHFHISPVKLHLSLSLGSGGEESDKEKQEMFAVHSVNLLLKSIGATLT---DVDDL
3280 3290 3300 3310 3320 3330
1100 1110 1120 1130 1140 1150
pF1KSD PLSFSVFERGPIFTTARQLVHALAMHYAAGALFRAGWVVGSLDILGSPASLVRSIGNGVA
.... .: : ::. ... ::. : . .: .::.::.: .:.:....::
CCDS10 IFKLAYYEIRYQFYKRDQLIWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVE
3340 3350 3360 3370 3380 3390
1160 1170 1180 1190 1200 1210
pF1KSD DFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMDRLSLDEEH
.: :..: ..:: :. :. :. :. : :. .. .. :..... ...:.:.
CCDS10 ALFYEPFQGAVQGPEEFAEGLVIGVRSLFGHTVGGAAGVVSRITGSVGKGLAAITMDKEY
3400 3410 3420 3430 3440 3450
1220 1230 1240 1250 1260 1270
pF1KSD YN-RQEEWRRQLPESLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQASAGHKA
. :.:: :: :...:..: .: . . ...:...::. .:... .: . :
CCDS10 QQKRREELSRQ-PRDFGDSLARGGKGFLRGVVGGVTGIITKPVEGAKKEGAA--------
3460 3470 3480 3490 3500
1280 1290 1300 1310 1320 1330
pF1KSD KGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLHADQAPNS
: ..:.:::..:. ..: :: ....:.: :: ..: .. .. . : .: :
CCDS10 -GFFKGIGKGLVGAVARPTGGIVDMASSTFQGIQRAAESTEEVSSLRPPRLIHEDGIIRP
3510 3520 3530 3540 3550 3560
1340 1350 1360 1370 1380 1390
pF1KSD HVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSVSEDTQQQAFPV
CCDS10 YDRQESEGSDLLENHIKKLEGETYRYHCAIPGSKKTILMVTNRRVLCIKEVEILGLMCVD
3570 3580 3590 3600 3610 3620
>>CCDS32257.1 VPS13C gene_id:54832|Hs108|chr15 (3753 aa)
initn: 254 init1: 147 opt: 310 Z-score: 351.6 bits: 79.1 E(32554): 2.9e-13
Smith-Waterman score: 381; 27.5% identity (63.8% similar) in 265 aa overlap (1069-1331:3352-3603)
1040 1050 1060 1070 1080 1090
pF1KSD LAGHSTHLSGGKQVLPMQVTQHARALVNPVKLRKLVIQPVNLLV-SIHASLKLYIASDHT
: . .... ::::. :: :.: :
CCDS32 LSFFEHFHISPVKLHLSLSLGSGGEESDKEKQEMFAVHSVNLLLKSIGATLT---DVDDL
3330 3340 3350 3360 3370
1100 1110 1120 1130 1140 1150
pF1KSD PLSFSVFERGPIFTTARQLVHALAMHYAAGALFRAGWVVGSLDILGSPASLVRSIGNGVA
.... .: : ::. ... ::. : . .: .::.::.: .:.:....::
CCDS32 IFKLAYYEIRYQFYKRDQLIWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVE
3380 3390 3400 3410 3420 3430
1160 1170 1180 1190 1200 1210
pF1KSD DFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMDRLSLDEEH
.: :..: ..:: :. :. :. :. : :. .. .. :..... ...:.:.
CCDS32 ALFYEPFQGAVQGPEEFAEGLVIGVRSLFGHTVGGAAGVVSRITGSVGKGLAAITMDKEY
3440 3450 3460 3470 3480 3490
1220 1230 1240 1250 1260 1270
pF1KSD YN-RQEEWRRQLPESLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQASAGHKA
. :.:: :: :...:..: .: . . ...:...::. .:... .: . :
CCDS32 QQKRREELSRQ-PRDFGDSLARGGKGFLRGVVGGVTGIITKPVEGAKKEGAA--------
3500 3510 3520 3530 3540
1280 1290 1300 1310 1320 1330
pF1KSD KGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLHADQAPNS
: ..:.:::..:. ..: :: ....:.: :: ..: .. .. . : .: :
CCDS32 -GFFKGIGKGLVGAVARPTGGIVDMASSTFQGIQRAAESTEEVSSLRPPRLIHEDGIIRP
3550 3560 3570 3580 3590 3600
1340 1350 1360 1370 1380 1390
pF1KSD HVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSVSEDTQQQAFPV
CCDS32 YDRQESEGSDLLENHIKKLEGETYRYHCAIPGSKKTILMVTNRRVLCIKEVEILGLMCVD
3610 3620 3630 3640 3650 3660
>>CCDS47983.1 VPS13A gene_id:23230|Hs108|chr9 (3069 aa)
initn: 378 init1: 282 opt: 308 Z-score: 350.5 bits: 78.6 E(32554): 3.3e-13
Smith-Waterman score: 382; 28.8% identity (60.7% similar) in 323 aa overlap (1003-1322:2744-3037)
980 990 1000 1010 1020 1030
pF1KSD LISNKELEEYKEKCFIKLCITLNEGKSILCDINEFSFELKPARLYVEDTFVYYIKTLFDT
::. :. : : : : :... : .:..
CCDS47 RLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASL-VDQSQV----SLYE-
2720 2730 2740 2750 2760
1040 1050 1060 1070 1080 1090
pF1KSD YLPNSRLAGH-STHLSGGKQVLPMQVTQHARALVNPVKLRKLVIQPVNLLVSIHASLKLY
:. : . : :. ::.:.. . ... .:. ::. .: :: :: :.:
CCDS47 YFHISPIKLHLSVSLSSGRE--EAKDSKQNGGLI-PVHSLNL------LLKSIGATL---
2770 2780 2790 2800 2810
1100 1110 1120 1130 1140
pF1KSD IASDHTPLSFSV--FERGPIFTTARQLVHALAMHYAAGALFRAGWVVGSLDILGSPASLV
.: . :.. :: . : :. .: . ::. :. . .. .::.::.: .:.
CCDS47 --TDVQDVVFKLAFFELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLI
2820 2830 2840 2850 2860 2870
1150 1160 1170 1180 1190 1200
pF1KSD RSIGNGVADFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMD
: ...:: :: ::.: .:: :: :.. : ..: : . .... ..:...
CCDS47 REFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVA
2880 2890 2900 2910 2920 2930
1210 1220 1230 1240 1250 1260
pF1KSD RLSLDEEHYNRQEEWRRQLPESLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQ
...::.. ....: . : .. ::. .: . : .....:.::: .:... ::
CCDS47 AMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQK-----
2940 2950 2960 2970 2980
1270 1280 1290 1300 1310 1320
pF1KSD ASAGHKAKGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLH
.: : : ..:::::..:. ..: :: ...:.: :: ... :.. . :
CCDS47 --GG--AAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEVESLRPPRFFNE
2990 3000 3010 3020 3030 3040
1330 1340 1350 1360 1370 1380
pF1KSD ADQAPNSHVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSVSEDT
CCDS47 DGVIRPYRLRDGTGNQMLQASKSLI
3050 3060
>>CCDS6656.1 VPS13A gene_id:23230|Hs108|chr9 (3095 aa)
initn: 378 init1: 282 opt: 308 Z-score: 350.5 bits: 78.6 E(32554): 3.3e-13
Smith-Waterman score: 382; 28.8% identity (60.7% similar) in 323 aa overlap (1003-1322:2744-3037)
980 990 1000 1010 1020 1030
pF1KSD LISNKELEEYKEKCFIKLCITLNEGKSILCDINEFSFELKPARLYVEDTFVYYIKTLFDT
::. :. : : : : :... : .:..
CCDS66 RLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASL-VDQSQV----SLYE-
2720 2730 2740 2750 2760
1040 1050 1060 1070 1080 1090
pF1KSD YLPNSRLAGH-STHLSGGKQVLPMQVTQHARALVNPVKLRKLVIQPVNLLVSIHASLKLY
:. : . : :. ::.:.. . ... .:. ::. .: :: :: :.:
CCDS66 YFHISPIKLHLSVSLSSGRE--EAKDSKQNGGLI-PVHSLNL------LLKSIGATL---
2770 2780 2790 2800 2810
1100 1110 1120 1130 1140
pF1KSD IASDHTPLSFSV--FERGPIFTTARQLVHALAMHYAAGALFRAGWVVGSLDILGSPASLV
.: . :.. :: . : :. .: . ::. :. . .. .::.::.: .:.
CCDS66 --TDVQDVVFKLAFFELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLI
2820 2830 2840 2850 2860 2870
1150 1160 1170 1180 1190 1200
pF1KSD RSIGNGVADFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMD
: ...:: :: ::.: .:: :: :.. : ..: : . .... ..:...
CCDS66 REFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVA
2880 2890 2900 2910 2920 2930
1210 1220 1230 1240 1250 1260
pF1KSD RLSLDEEHYNRQEEWRRQLPESLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQ
...::.. ....: . : .. ::. .: . : .....:.::: .:... ::
CCDS66 AMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQK-----
2940 2950 2960 2970 2980
1270 1280 1290 1300 1310 1320
pF1KSD ASAGHKAKGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLH
.: : : ..:::::..:. ..: :: ...:.: :: ... :.. . :
CCDS66 --GG--AAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEVESLRPPRFFNE
2990 3000 3010 3020 3030 3040
1330 1340 1350 1360 1370 1380
pF1KSD ADQAPNSHVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSVSEDT
CCDS66 DGVIRPYRLRDGTGNQMLQKIQFYREWIMTHSSSSDDDDDDDDDDESDLNH
3050 3060 3070 3080 3090
>>CCDS55321.1 VPS13A gene_id:23230|Hs108|chr9 (3135 aa)
initn: 378 init1: 282 opt: 308 Z-score: 350.4 bits: 78.6 E(32554): 3.4e-13
Smith-Waterman score: 382; 28.8% identity (60.7% similar) in 323 aa overlap (1003-1322:2705-2998)
980 990 1000 1010 1020 1030
pF1KSD LISNKELEEYKEKCFIKLCITLNEGKSILCDINEFSFELKPARLYVEDTFVYYIKTLFDT
::. :. : : : : :... : .:..
CCDS55 RLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASL-VDQSQV----SLYE-
2680 2690 2700 2710 2720
1040 1050 1060 1070 1080 1090
pF1KSD YLPNSRLAGH-STHLSGGKQVLPMQVTQHARALVNPVKLRKLVIQPVNLLVSIHASLKLY
:. : . : :. ::.:.. . ... .:. ::. .: :: :: :.:
CCDS55 YFHISPIKLHLSVSLSSGRE--EAKDSKQNGGLI-PVHSLNL------LLKSIGATL---
2730 2740 2750 2760 2770
1100 1110 1120 1130 1140
pF1KSD IASDHTPLSFSV--FERGPIFTTARQLVHALAMHYAAGALFRAGWVVGSLDILGSPASLV
.: . :.. :: . : :. .: . ::. :. . .. .::.::.: .:.
CCDS55 --TDVQDVVFKLAFFELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLI
2780 2790 2800 2810 2820 2830
1150 1160 1170 1180 1190 1200
pF1KSD RSIGNGVADFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMD
: ...:: :: ::.: .:: :: :.. : ..: : . .... ..:...
CCDS55 REFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVA
2840 2850 2860 2870 2880 2890
1210 1220 1230 1240 1250 1260
pF1KSD RLSLDEEHYNRQEEWRRQLPESLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQ
...::.. ....: . : .. ::. .: . : .....:.::: .:... ::
CCDS55 AMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQK-----
2900 2910 2920 2930 2940
1270 1280 1290 1300 1310 1320
pF1KSD ASAGHKAKGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLH
.: : : ..:::::..:. ..: :: ...:.: :: ... :.. . :
CCDS55 --GG--AAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEVESLRPPRFFNE
2950 2960 2970 2980 2990 3000
1330 1340 1350 1360 1370 1380
pF1KSD ADQAPNSHVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSVSEDT
CCDS55 DGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFTHVMINKTDMLMITRRGVLFVTKGTFGQ
3010 3020 3030 3040 3050 3060
>>CCDS6655.1 VPS13A gene_id:23230|Hs108|chr9 (3174 aa)
initn: 378 init1: 282 opt: 308 Z-score: 350.3 bits: 78.6 E(32554): 3.4e-13
Smith-Waterman score: 382; 28.8% identity (60.7% similar) in 323 aa overlap (1003-1322:2744-3037)
980 990 1000 1010 1020 1030
pF1KSD LISNKELEEYKEKCFIKLCITLNEGKSILCDINEFSFELKPARLYVEDTFVYYIKTLFDT
::. :. : : : : :... : .:..
CCDS66 RLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASL-VDQSQV----SLYE-
2720 2730 2740 2750 2760
1040 1050 1060 1070 1080 1090
pF1KSD YLPNSRLAGH-STHLSGGKQVLPMQVTQHARALVNPVKLRKLVIQPVNLLVSIHASLKLY
:. : . : :. ::.:.. . ... .:. ::. .: :: :: :.:
CCDS66 YFHISPIKLHLSVSLSSGRE--EAKDSKQNGGLI-PVHSLNL------LLKSIGATL---
2770 2780 2790 2800 2810
1100 1110 1120 1130 1140
pF1KSD IASDHTPLSFSV--FERGPIFTTARQLVHALAMHYAAGALFRAGWVVGSLDILGSPASLV
.: . :.. :: . : :. .: . ::. :. . .. .::.::.: .:.
CCDS66 --TDVQDVVFKLAFFELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLI
2820 2830 2840 2850 2860 2870
1150 1160 1170 1180 1190 1200
pF1KSD RSIGNGVADFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMD
: ...:: :: ::.: .:: :: :.. : ..: : . .... ..:...
CCDS66 REFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVA
2880 2890 2900 2910 2920 2930
1210 1220 1230 1240 1250 1260
pF1KSD RLSLDEEHYNRQEEWRRQLPESLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQ
...::.. ....: . : .. ::. .: . : .....:.::: .:... ::
CCDS66 AMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQK-----
2940 2950 2960 2970 2980
1270 1280 1290 1300 1310 1320
pF1KSD ASAGHKAKGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLH
.: : : ..:::::..:. ..: :: ...:.: :: ... :.. . :
CCDS66 --GG--AAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEVESLRPPRFFNE
2990 3000 3010 3020 3030 3040
1330 1340 1350 1360 1370 1380
pF1KSD ADQAPNSHVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSVSEDT
CCDS66 DGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFTHVMINKTDMLMITRRGVLFVTKGTFGQ
3050 3060 3070 3080 3090 3100
1507 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 01:58:48 2016 done: Thu Nov 3 01:58:49 2016
Total Scan time: 4.990 Total Display time: 0.460
Function used was FASTA [36.3.4 Apr, 2011]