Result of FASTA (omim) for
pF1KSDA0513
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0513, 411 aa
1>>>pF1KSDA0513 411 - 411 aa - 411 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6199+/-0.000288; mu= 11.9780+/- 0.018
mean_var=102.3327+/-20.949, 0's: 0 Z-trim(120.1): 6 B-trim: 254 in 1/55
Lambda= 0.126785
statistics sampled from 34869 (34875) to 34869 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.748), E-opt: 0.2 (0.409), width: 16
Scan time: 7.340
The best scores are: opt bits E(85289)
XP_005256322 (OMIM: 611675) PREDICTED: uncharacter ( 411) 2790 520.3 3.3e-147
XP_016879401 (OMIM: 611675) PREDICTED: uncharacter ( 411) 2790 520.3 3.3e-147
NP_001273494 (OMIM: 611675) uncharacterized protei ( 411) 2790 520.3 3.3e-147
NP_055547 (OMIM: 611675) uncharacterized protein K ( 411) 2790 520.3 3.3e-147
NP_001273495 (OMIM: 611675) uncharacterized protei ( 401) 2222 416.4 6.1e-116
NP_001284695 (OMIM: 611675) uncharacterized protei ( 301) 2035 382.2 9.6e-106
>>XP_005256322 (OMIM: 611675) PREDICTED: uncharacterized (411 aa)
initn: 2790 init1: 2790 opt: 2790 Z-score: 2763.8 bits: 520.3 E(85289): 3.3e-147
Smith-Waterman score: 2790; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KSD METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD WHTLRFWNAAFFDAVHCERTKRSPTTRGDAGEEEEKREKWCHMTQEERDDSLRFNENITF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WHTLRFWNAAFFDAVHCERTKRSPTTRGDAGEEEEKREKWCHMTQEERDDSLRFNENITF
310 320 330 340 350 360
370 380 390 400 410
pF1KSD GQLGTFTHNMLAFGLNKKLCNDFLKKQAVIGNLDEEQYKLLSDHIEQMATE
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GQLGTFTHNMLAFGLNKKLCNDFLKKQAVIGNLDEEQYKLLSDHIEQMATE
370 380 390 400 410
>>XP_016879401 (OMIM: 611675) PREDICTED: uncharacterized (411 aa)
initn: 2790 init1: 2790 opt: 2790 Z-score: 2763.8 bits: 520.3 E(85289): 3.3e-147
Smith-Waterman score: 2790; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KSD METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD WHTLRFWNAAFFDAVHCERTKRSPTTRGDAGEEEEKREKWCHMTQEERDDSLRFNENITF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WHTLRFWNAAFFDAVHCERTKRSPTTRGDAGEEEEKREKWCHMTQEERDDSLRFNENITF
310 320 330 340 350 360
370 380 390 400 410
pF1KSD GQLGTFTHNMLAFGLNKKLCNDFLKKQAVIGNLDEEQYKLLSDHIEQMATE
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQLGTFTHNMLAFGLNKKLCNDFLKKQAVIGNLDEEQYKLLSDHIEQMATE
370 380 390 400 410
>>NP_001273494 (OMIM: 611675) uncharacterized protein KI (411 aa)
initn: 2790 init1: 2790 opt: 2790 Z-score: 2763.8 bits: 520.3 E(85289): 3.3e-147
Smith-Waterman score: 2790; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KSD METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD WHTLRFWNAAFFDAVHCERTKRSPTTRGDAGEEEEKREKWCHMTQEERDDSLRFNENITF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WHTLRFWNAAFFDAVHCERTKRSPTTRGDAGEEEEKREKWCHMTQEERDDSLRFNENITF
310 320 330 340 350 360
370 380 390 400 410
pF1KSD GQLGTFTHNMLAFGLNKKLCNDFLKKQAVIGNLDEEQYKLLSDHIEQMATE
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQLGTFTHNMLAFGLNKKLCNDFLKKQAVIGNLDEEQYKLLSDHIEQMATE
370 380 390 400 410
>>NP_055547 (OMIM: 611675) uncharacterized protein KIAA0 (411 aa)
initn: 2790 init1: 2790 opt: 2790 Z-score: 2763.8 bits: 520.3 E(85289): 3.3e-147
Smith-Waterman score: 2790; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KSD METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD WHTLRFWNAAFFDAVHCERTKRSPTTRGDAGEEEEKREKWCHMTQEERDDSLRFNENITF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 WHTLRFWNAAFFDAVHCERTKRSPTTRGDAGEEEEKREKWCHMTQEERDDSLRFNENITF
310 320 330 340 350 360
370 380 390 400 410
pF1KSD GQLGTFTHNMLAFGLNKKLCNDFLKKQAVIGNLDEEQYKLLSDHIEQMATE
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GQLGTFTHNMLAFGLNKKLCNDFLKKQAVIGNLDEEQYKLLSDHIEQMATE
370 380 390 400 410
>>NP_001273495 (OMIM: 611675) uncharacterized protein KI (401 aa)
initn: 2222 init1: 2222 opt: 2222 Z-score: 2202.4 bits: 416.4 E(85289): 6.1e-116
Smith-Waterman score: 2694; 97.6% identity (97.6% similar) in 411 aa overlap (1-411:1-401)
10 20 30 40 50 60
pF1KSD METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD WHTLRFWNAAFFDAVHCERTKRSPTTRGDAGEEEEKREKWCHMTQEERDDSLRFNENITF
::::::::::::::::::::::::::: :::::::::::::::::::::::
NP_001 WHTLRFWNAAFFDAVHCERTKRSPTTR----------EKWCHMTQEERDDSLRFNENITF
310 320 330 340 350
370 380 390 400 410
pF1KSD GQLGTFTHNMLAFGLNKKLCNDFLKKQAVIGNLDEEQYKLLSDHIEQMATE
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQLGTFTHNMLAFGLNKKLCNDFLKKQAVIGNLDEEQYKLLSDHIEQMATE
360 370 380 390 400
>>NP_001284695 (OMIM: 611675) uncharacterized protein KI (301 aa)
initn: 2035 init1: 2035 opt: 2035 Z-score: 2019.5 bits: 382.2 E(85289): 9.6e-106
Smith-Waterman score: 2035; 100.0% identity (100.0% similar) in 301 aa overlap (1-301:1-301)
10 20 30 40 50 60
pF1KSD METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD WHTLRFWNAAFFDAVHCERTKRSPTTRGDAGEEEEKREKWCHMTQEERDDSLRFNENITF
:
NP_001 W
411 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 01:54:11 2016 done: Thu Nov 3 01:54:12 2016
Total Scan time: 7.340 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]