Result of FASTA (ccds) for
pF1KSDA0436
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0436, 638 aa
1>>>pF1KSDA0436 638 - 638 aa - 638 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8610+/-0.000979; mu= 16.0542+/- 0.059
mean_var=64.2741+/-12.530, 0's: 0 Z-trim(103.5): 15 B-trim: 56 in 1/51
Lambda= 0.159977
statistics sampled from 7453 (7458) to 7453 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.229), width: 16
Scan time: 2.390
The best scores are: opt bits E(32554)
CCDS54353.1 PREPL gene_id:9581|Hs108|chr2 ( 638) 4316 1005.3 0
CCDS33190.1 PREPL gene_id:9581|Hs108|chr2 ( 727) 4316 1005.3 0
CCDS42675.1 PREPL gene_id:9581|Hs108|chr2 ( 665) 2336 548.3 1.2e-155
CCDS42676.1 PREPL gene_id:9581|Hs108|chr2 ( 661) 1989 468.2 1.6e-131
CCDS5053.1 PREP gene_id:5550|Hs108|chr6 ( 710) 372 95.0 3.7e-19
>>CCDS54353.1 PREPL gene_id:9581|Hs108|chr2 (638 aa)
initn: 4316 init1: 4316 opt: 4316 Z-score: 5377.7 bits: 1005.3 E(32554): 0
Smith-Waterman score: 4316; 100.0% identity (100.0% similar) in 638 aa overlap (1-638:1-638)
10 20 30 40 50 60
pF1KSD MDAFEKVRTKLETQPQEEYEIINVEVKHGGFVYYQEGCCLVRSKDEEADNDNYEVLFNLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MDAFEKVRTKLETQPQEEYEIINVEVKHGGFVYYQEGCCLVRSKDEEADNDNYEVLFNLE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ELKLDQPFIDCIRVAPDEKYVAAKIRTEDSEASTCVIIKLSDQPVMEASFPNVSSFEWVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ELKLDQPFIDCIRVAPDEKYVAAKIRTEDSEASTCVIIKLSDQPVMEASFPNVSSFEWVK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD DEEDEDVLFYTFQRNLRCHDVYRATFGDNKRNERFYTEKDPSYFVFLYLTKDSRFLTINI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DEEDEDVLFYTFQRNLRCHDVYRATFGDNKRNERFYTEKDPSYFVFLYLTKDSRFLTINI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD MNKTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHRDDELYILTNVGEPTEFKLMRTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MNKTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHRDDELYILTNVGEPTEFKLMRTAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD DTPAIMNWDLFFTMKRNTKVIDLDMFKDHCVLFLKHSNLLYVNVIGLADDSVRSLKLPPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DTPAIMNWDLFFTMKRNTKVIDLDMFKDHCVLFLKHSNLLYVNVIGLADDSVRSLKLPPW
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD ACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKFAEGKLFEETGHEDPITKTSRVLRLEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKFAEGKLFEETGHEDPITKTSRVLRLEAK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD RGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALC
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD NSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD KPQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KPQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGN
550 560 570 580 590 600
610 620 630
pF1KSD HVIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF
::::::::::::::::::::::::::::::::::::::
CCDS54 HVIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF
610 620 630
>>CCDS33190.1 PREPL gene_id:9581|Hs108|chr2 (727 aa)
initn: 4316 init1: 4316 opt: 4316 Z-score: 5376.8 bits: 1005.3 E(32554): 0
Smith-Waterman score: 4316; 100.0% identity (100.0% similar) in 638 aa overlap (1-638:90-727)
10 20 30
pF1KSD MDAFEKVRTKLETQPQEEYEIINVEVKHGG
::::::::::::::::::::::::::::::
CCDS33 ELARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGG
60 70 80 90 100 110
40 50 60 70 80 90
pF1KSD FVYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FVYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDS
120 130 140 150 160 170
100 110 120 130 140 150
pF1KSD EASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNK
180 190 200 210 220 230
160 170 180 190 200 210
pF1KSD RNERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RNERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGV
240 250 260 270 280 290
220 230 240 250 260 270
pF1KSD LYYVEHRDDELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LYYVEHRDDELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHC
300 310 320 330 340 350
280 290 300 310 320 330
pF1KSD VLFLKHSNLLYVNVIGLADDSVRSLKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VLFLKHSNLLYVNVIGLADDSVRSLKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYT
360 370 380 390 400 410
340 350 360 370 380 390
pF1KSD YKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 YKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVY
420 430 440 450 460 470
400 410 420 430 440 450
pF1KSD GAYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GAYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACI
480 490 500 510 520 530
460 470 480 490 500 510
pF1KSD KTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPL
540 550 560 570 580 590
520 530 540 550 560 570
pF1KSD TLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEK
600 610 620 630 640 650
580 590 600 610 620 630
pF1KSD LKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFE
660 670 680 690 700 710
pF1KSD DLKKYLKF
::::::::
CCDS33 DLKKYLKF
720
>>CCDS42675.1 PREPL gene_id:9581|Hs108|chr2 (665 aa)
initn: 2334 init1: 2334 opt: 2336 Z-score: 2907.7 bits: 548.3 E(32554): 1.2e-155
Smith-Waterman score: 3773; 90.3% identity (90.3% similar) in 638 aa overlap (1-638:90-665)
10 20 30
pF1KSD MDAFEKVRTKLETQPQEEYEIINVEVKHGG
::::::::::::::::::::::::::::::
CCDS42 ELARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGG
60 70 80 90 100 110
40 50 60 70 80 90
pF1KSD FVYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FVYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDS
120 130 140 150 160 170
100 110 120 130 140 150
pF1KSD EASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNK
180 190 200 210 220 230
160 170 180 190 200 210
pF1KSD RNERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RNERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGV
240 250 260 270 280 290
220 230 240 250 260 270
pF1KSD LYYVEHRDDELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHC
:::::::::::::::::::::::::
CCDS42 LYYVEHRDDELYILTNVGEPTEFKL-----------------------------------
300 310 320
280 290 300 310 320 330
pF1KSD VLFLKHSNLLYVNVIGLADDSVRSLKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYT
:::::::::::::::::::::::::::::::::
CCDS42 ---------------------------PPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYT
330 340 350
340 350 360 370 380 390
pF1KSD YKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 YKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVY
360 370 380 390 400 410
400 410 420 430 440 450
pF1KSD GAYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GAYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACI
420 430 440 450 460 470
460 470 480 490 500 510
pF1KSD KTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPL
480 490 500 510 520 530
520 530 540 550 560 570
pF1KSD TLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEK
540 550 560 570 580 590
580 590 600 610 620 630
pF1KSD LKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFE
600 610 620 630 640 650
pF1KSD DLKKYLKF
::::::::
CCDS42 DLKKYLKF
660
>>CCDS42676.1 PREPL gene_id:9581|Hs108|chr2 (661 aa)
initn: 1989 init1: 1989 opt: 1989 Z-score: 2474.9 bits: 468.2 E(32554): 1.6e-131
Smith-Waterman score: 3700; 89.7% identity (89.7% similar) in 638 aa overlap (1-638:90-661)
10 20 30
pF1KSD MDAFEKVRTKLETQPQEEYEIINVEVKHGG
::::::::::::::::::::::::::::::
CCDS42 ELARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGG
60 70 80 90 100 110
40 50 60 70 80 90
pF1KSD FVYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FVYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDS
120 130 140 150 160 170
100 110 120 130 140 150
pF1KSD EASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNK
180 190 200 210 220 230
160 170 180 190 200 210
pF1KSD RNERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RNERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGV
240 250 260 270 280 290
220 230 240 250 260 270
pF1KSD LYYVEHRDDELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LYYVEHRDDELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHC
300 310 320 330 340 350
280 290 300 310 320 330
pF1KSD VLFLKHSNLLYVNVIGLADDSVRSLKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYT
::::::::::::::::::::::::::
CCDS42 VLFLKHSNLLYVNVIGLADDSVRSLK----------------------------------
360 370 380
340 350 360 370 380 390
pF1KSD YKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVY
::::::::::::::::::::::::::::
CCDS42 --------------------------------DGKLVPMTVFHKTDSEDLQKKPLLVHVY
390 400 410
400 410 420 430 440 450
pF1KSD GAYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GAYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACI
420 430 440 450 460 470
460 470 480 490 500 510
pF1KSD KTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPL
480 490 500 510 520 530
520 530 540 550 560 570
pF1KSD TLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEK
540 550 560 570 580 590
580 590 600 610 620 630
pF1KSD LKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFE
600 610 620 630 640 650
pF1KSD DLKKYLKF
::::::::
CCDS42 DLKKYLKF
660
>>CCDS5053.1 PREP gene_id:5550|Hs108|chr6 (710 aa)
initn: 260 init1: 179 opt: 372 Z-score: 457.5 bits: 95.0 E(32554): 3.7e-19
Smith-Waterman score: 398; 24.9% identity (54.5% similar) in 473 aa overlap (141-582:210-667)
120 130 140 150 160
pF1KSD PNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKRNERFYTE--KDPSYFVFLY
.: ..: .. .. . .: .:...
CCDS50 HDGKGMFYNSYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE
180 190 200 210 220 230
170 180 190 200 210 220
pF1KSD LTKDSRFLTINIMN--KTTSEVWLIDGLSPWDPPVLIQKR--IHGVLYYVEHRDD---EL
:. :.:.. ..: . ....: : : :. : :.: .:. :. :
CCDS50 LSDDGRYVLLSIREGCDPVNRLWYCD---------LQQESSGIAGILKWVKLIDNFEGEY
240 250 260 270 280 290
230 240 250 260 270
pF1KSD YILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKD-----HCVL--FL
.:: : :: : . . ..: :. . . ::. . :: :: ::
CCDS50 DYVTNEGTVFTFKTNRQSPNY-RVINIDFRDPEESKWKVLVPEHEKDVLEWIACVRSNFL
300 310 320 330 340
280 290 300 310 320
pF1KSD KHSNLLYV-NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQLCSPIRPPKYY-
: : :.. : : .. .: : : : :. ... :. .:. : . : :
CCDS50 VLCYLHDVKNILQLHDLTTGALLKTFPLDVGSIVGYSGQKKDTEIFYQFTSFLSPGIIYH
350 360 370 380 390 400
330 340 350 360 370 380
pF1KSD ---TYKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLL
: . : ..:.:. . .. ..... :::: .:: . :: . ..: .
CCDS50 CDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAF
410 420 430 440 450 460
390 400 410 420 430 440
pF1KSD VHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHVRGGGELGLQWHADGRLTKKLNGLAD
.. ::...... :. : ..: : ::: ..::::: : :: : :..: : . :
CCDS50 LYGYGGFNISITPNYSVSRLIFVRHMGGILAVANIRGGGEYGETWHKGGILANKQNCFDD
470 480 490 500 510 520
450 460 470 480 490 500
pF1KSD LEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMD
.. . : .:...:. :... : ::.:..: :. :.: : .. .:.:.
CCDS50 FQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKY
530 540 550 560 570 580
510 520 530 540 550
pF1KSD TTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK-PQ----HYPSIHITAYENDERV-
: . ..: :....: ... .: : .:.: :. .:::. . . ..:.::
CCDS50 T---IGHAWTTDYGC-SDSKQHFEWLVKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVV
590 600 610 620 630 640
560 570 580 590 600 610
pF1KSD PLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYE
::... .. :. ... :..
CCDS50 PLHSL-KFIATLQYIVGRSRKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCL
650 660 670 680 690 700
638 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 01:43:39 2016 done: Thu Nov 3 01:43:39 2016
Total Scan time: 2.390 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]