Result of FASTA (ccds) for
pF1KSDA0251
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0251, 788 aa
1>>>pF1KSDA0251 788 - 788 aa - 788 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3303+/-0.000889; mu= 15.8999+/- 0.053
mean_var=93.4362+/-18.638, 0's: 0 Z-trim(108.6): 23 B-trim: 0 in 0/53
Lambda= 0.132683
statistics sampled from 10296 (10315) to 10296 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.68), E-opt: 0.2 (0.317), width: 16
Scan time: 3.550
The best scores are: opt bits E(32554)
CCDS32393.1 PDXDC1 gene_id:23042|Hs108|chr16 ( 788) 5203 1006.6 0
CCDS66955.1 PDXDC1 gene_id:23042|Hs108|chr16 ( 760) 4693 908.9 0
CCDS66954.1 PDXDC1 gene_id:23042|Hs108|chr16 ( 761) 4693 908.9 0
CCDS66957.1 PDXDC1 gene_id:23042|Hs108|chr16 ( 697) 4365 846.1 0
CCDS73830.1 PDXDC1 gene_id:23042|Hs108|chr16 ( 498) 3120 607.7 1.4e-173
CCDS73831.1 PDXDC1 gene_id:23042|Hs108|chr16 ( 429) 1431 284.4 2.7e-76
>>CCDS32393.1 PDXDC1 gene_id:23042|Hs108|chr16 (788 aa)
initn: 5203 init1: 5203 opt: 5203 Z-score: 5381.5 bits: 1006.6 E(32554): 0
Smith-Waterman score: 5203; 100.0% identity (100.0% similar) in 788 aa overlap (1-788:1-788)
10 20 30 40 50 60
pF1KSD MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD TTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD NAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 NAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAVLGTRGEDVDQLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAVLGTRGEDVDQLVA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD CIESKLPVLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRYEHANDDKSSLKSDPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 CIESKLPVLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRYEHANDDKSSLKSDPE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD GENIHAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GENIHAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD ENSRLLENMTEVVRKGIQEAQVELQKASEERLLEEGVLRQIPVVGSVLNWFSPVQALQKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ENSRLLENMTEVVRKGIQEAQVELQKASEERLLEEGVLRQIPVVGSVLNWFSPVQALQKG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD RTFNLTAGSLESTEPIYVYKAQGAGVTLPPTPSGSRTKQRLPGQKPFKRSLRGSDALSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RTFNLTAGSLESTEPIYVYKAQGAGVTLPPTPSGSRTKQRLPGQKPFKRSLRGSDALSET
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD SSVSHIEDLEKVERLSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQKGVPHPEDDHSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SSVSHIEDLEKVERLSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQKGVPHPEDDHSQ
730 740 750 760 770 780
pF1KSD VEGPESLR
::::::::
CCDS32 VEGPESLR
>>CCDS66955.1 PDXDC1 gene_id:23042|Hs108|chr16 (760 aa)
initn: 4886 init1: 4689 opt: 4693 Z-score: 4854.1 bits: 908.9 E(32554): 0
Smith-Waterman score: 4938; 96.4% identity (96.4% similar) in 788 aa overlap (1-788:1-760)
10 20 30 40 50 60
pF1KSD MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVS
:::::::::::::::::::::::::::::::: ::::::::::::::::::::
CCDS66 MDASLEKIADPTLAEMGKNLKEAVKMLEDSQR-TEEENGKKLISGDIPGPLQG-------
10 20 30 40 50
70 80 90 100 110 120
pF1KSD ILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSD
::::::::::::::::::::::::::::::::::::::::
CCDS66 --------------------RIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSD
60 70 80 90
130 140 150 160 170 180
pF1KSD TTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVA
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD NAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 NAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KSD CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGR
340 350 360 370 380 390
430 440 450 460 470 480
pF1KSD ERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAVLGTRGEDVDQLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAVLGTRGEDVDQLVA
400 410 420 430 440 450
490 500 510 520 530 540
pF1KSD CIESKLPVLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRYEHANDDKSSLKSDPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 CIESKLPVLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRYEHANDDKSSLKSDPE
460 470 480 490 500 510
550 560 570 580 590 600
pF1KSD GENIHAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GENIHAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIE
520 530 540 550 560 570
610 620 630 640 650 660
pF1KSD ENSRLLENMTEVVRKGIQEAQVELQKASEERLLEEGVLRQIPVVGSVLNWFSPVQALQKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ENSRLLENMTEVVRKGIQEAQVELQKASEERLLEEGVLRQIPVVGSVLNWFSPVQALQKG
580 590 600 610 620 630
670 680 690 700 710 720
pF1KSD RTFNLTAGSLESTEPIYVYKAQGAGVTLPPTPSGSRTKQRLPGQKPFKRSLRGSDALSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RTFNLTAGSLESTEPIYVYKAQGAGVTLPPTPSGSRTKQRLPGQKPFKRSLRGSDALSET
640 650 660 670 680 690
730 740 750 760 770 780
pF1KSD SSVSHIEDLEKVERLSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQKGVPHPEDDHSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SSVSHIEDLEKVERLSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQKGVPHPEDDHSQ
700 710 720 730 740 750
pF1KSD VEGPESLR
::::::::
CCDS66 VEGPESLR
760
>>CCDS66954.1 PDXDC1 gene_id:23042|Hs108|chr16 (761 aa)
initn: 4689 init1: 4689 opt: 4693 Z-score: 4854.1 bits: 908.9 E(32554): 0
Smith-Waterman score: 4957; 96.6% identity (96.6% similar) in 788 aa overlap (1-788:1-761)
10 20 30 40 50 60
pF1KSD MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVS
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQG-------
10 20 30 40 50
70 80 90 100 110 120
pF1KSD ILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSD
::::::::::::::::::::::::::::::::::::::::
CCDS66 --------------------RIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSD
60 70 80 90
130 140 150 160 170 180
pF1KSD TTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVA
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD NAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 NAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KSD CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGR
340 350 360 370 380 390
430 440 450 460 470 480
pF1KSD ERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAVLGTRGEDVDQLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAVLGTRGEDVDQLVA
400 410 420 430 440 450
490 500 510 520 530 540
pF1KSD CIESKLPVLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRYEHANDDKSSLKSDPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 CIESKLPVLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRYEHANDDKSSLKSDPE
460 470 480 490 500 510
550 560 570 580 590 600
pF1KSD GENIHAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GENIHAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIE
520 530 540 550 560 570
610 620 630 640 650 660
pF1KSD ENSRLLENMTEVVRKGIQEAQVELQKASEERLLEEGVLRQIPVVGSVLNWFSPVQALQKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ENSRLLENMTEVVRKGIQEAQVELQKASEERLLEEGVLRQIPVVGSVLNWFSPVQALQKG
580 590 600 610 620 630
670 680 690 700 710 720
pF1KSD RTFNLTAGSLESTEPIYVYKAQGAGVTLPPTPSGSRTKQRLPGQKPFKRSLRGSDALSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RTFNLTAGSLESTEPIYVYKAQGAGVTLPPTPSGSRTKQRLPGQKPFKRSLRGSDALSET
640 650 660 670 680 690
730 740 750 760 770 780
pF1KSD SSVSHIEDLEKVERLSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQKGVPHPEDDHSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SSVSHIEDLEKVERLSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQKGVPHPEDDHSQ
700 710 720 730 740 750
pF1KSD VEGPESLR
::::::::
CCDS66 VEGPESLR
760
>>CCDS66957.1 PDXDC1 gene_id:23042|Hs108|chr16 (697 aa)
initn: 4598 init1: 4365 opt: 4365 Z-score: 4515.4 bits: 846.1 E(32554): 0
Smith-Waterman score: 4450; 90.2% identity (90.2% similar) in 773 aa overlap (16-788:1-697)
10 20 30 40 50 60
pF1KSD MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVS
::::::::::::::::::::::::::::::::::::::
CCDS66 MGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQG-------
10 20 30
70 80 90 100 110 120
pF1KSD ILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSD
CCDS66 ------------------------------------------------------------
130 140 150 160 170 180
pF1KSD TTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ---------RYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
40 50 60 70 80
190 200 210 220 230 240
pF1KSD AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVA
90 100 110 120 130 140
250 260 270 280 290 300
pF1KSD NAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 NAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG
150 160 170 180 190 200
310 320 330 340 350 360
pF1KSD PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
210 220 230 240 250 260
370 380 390 400 410 420
pF1KSD CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGR
270 280 290 300 310 320
430 440 450 460 470 480
pF1KSD ERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAVLGTRGEDVDQLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAVLGTRGEDVDQLVA
330 340 350 360 370 380
490 500 510 520 530 540
pF1KSD CIESKLPVLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRYEHANDDKSSLKSDPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 CIESKLPVLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRYEHANDDKSSLKSDPE
390 400 410 420 430 440
550 560 570 580 590 600
pF1KSD GENIHAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GENIHAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIE
450 460 470 480 490 500
610 620 630 640 650 660
pF1KSD ENSRLLENMTEVVRKGIQEAQVELQKASEERLLEEGVLRQIPVVGSVLNWFSPVQALQKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ENSRLLENMTEVVRKGIQEAQVELQKASEERLLEEGVLRQIPVVGSVLNWFSPVQALQKG
510 520 530 540 550 560
670 680 690 700 710 720
pF1KSD RTFNLTAGSLESTEPIYVYKAQGAGVTLPPTPSGSRTKQRLPGQKPFKRSLRGSDALSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RTFNLTAGSLESTEPIYVYKAQGAGVTLPPTPSGSRTKQRLPGQKPFKRSLRGSDALSET
570 580 590 600 610 620
730 740 750 760 770 780
pF1KSD SSVSHIEDLEKVERLSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQKGVPHPEDDHSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SSVSHIEDLEKVERLSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQKGVPHPEDDHSQ
630 640 650 660 670 680
pF1KSD VEGPESLR
::::::::
CCDS66 VEGPESLR
690
>>CCDS73830.1 PDXDC1 gene_id:23042|Hs108|chr16 (498 aa)
initn: 3139 init1: 3114 opt: 3120 Z-score: 3229.6 bits: 607.7 E(32554): 1.4e-173
Smith-Waterman score: 3120; 96.7% identity (97.5% similar) in 486 aa overlap (1-486:1-484)
10 20 30 40 50 60
pF1KSD MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD TTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD NAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 NAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAVLGTRGEDVDQLVA
:::::::::::::::::::::::::::::::::::::::::::::: : .
CCDS73 ERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAA--GWSHCGTTTRYD
430 440 450 460 470
490 500 510 520 530 540
pF1KSD CIESKLPVLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRYEHANDDKSSLKSDPE
:..:.:
CCDS73 CVRSRLTTRLPGSTGEQAPP
480 490
>>CCDS73831.1 PDXDC1 gene_id:23042|Hs108|chr16 (429 aa)
initn: 2698 init1: 1431 opt: 1431 Z-score: 1483.2 bits: 284.4 E(32554): 2.7e-76
Smith-Waterman score: 2656; 94.4% identity (94.7% similar) in 432 aa overlap (1-432:1-409)
10 20 30 40 50 60
pF1KSD MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD TTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVA
::::::::::::: ::::::::::::::::::::::::
CCDS73 AARPGLGQYLCNQ-----------------------DVAFLEKLIKDDIERGRLPLLLVA
190 200 210
250 260 270 280 290 300
pF1KSD NAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 NAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPG
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KSD CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGR
340 350 360 370 380 390
430 440 450 460 470 480
pF1KSD ERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAVLGTRGEDVDQLVA
:::::::::::.
CCDS73 ERHSCDALNRWVRMAVTPLSFQVPVHHHPTCW
400 410 420
788 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 00:55:56 2016 done: Thu Nov 3 00:55:57 2016
Total Scan time: 3.550 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]