Result of FASTA (omim) for
pF1KSDA0190
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0190, 803 aa
1>>>pF1KSDA0190 803 - 803 aa - 803 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2874+/-0.000419; mu= 1.0342+/- 0.026
mean_var=181.4928+/-38.463, 0's: 0 Z-trim(117.4): 124 B-trim: 1374 in 2/53
Lambda= 0.095202
statistics sampled from 29158 (29288) to 29158 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.343), width: 16
Scan time: 10.240
The best scores are: opt bits E(85289)
NP_005144 (OMIM: 609818) ubiquitin carboxyl-termin ( 798) 5293 740.0 9.6e-213
NP_001259004 (OMIM: 609818) ubiquitin carboxyl-ter ( 802) 5253 734.5 4.3e-211
XP_011521742 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_006721395 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879358 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_011521743 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879356 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879355 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879354 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879353 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879357 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_011521745 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879352 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016878210 (OMIM: 603158) PREDICTED: ubiquitin c ( 928) 271 50.2 4.8e-05
XP_016878211 (OMIM: 603158) PREDICTED: ubiquitin c ( 928) 271 50.2 4.8e-05
NP_001269978 (OMIM: 603158) ubiquitin carboxyl-ter (1012) 271 50.3 5.1e-05
XP_016878208 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 271 50.3 5.5e-05
XP_016878209 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 271 50.3 5.5e-05
XP_006720825 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 271 50.3 5.5e-05
XP_016878207 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 271 50.3 5.5e-05
XP_011520495 (OMIM: 603158) PREDICTED: ubiquitin c (1118) 271 50.3 5.6e-05
XP_006720824 (OMIM: 603158) PREDICTED: ubiquitin c (1118) 271 50.3 5.6e-05
NP_001122082 (OMIM: 603158) ubiquitin carboxyl-ter (1118) 271 50.3 5.6e-05
NP_005145 (OMIM: 603158) ubiquitin carboxyl-termin (1118) 271 50.3 5.6e-05
XP_005272731 (OMIM: 300050) PREDICTED: ubiquitin c ( 690) 239 45.8 0.00077
XP_011542290 (OMIM: 300050) PREDICTED: ubiquitin c ( 690) 239 45.8 0.00077
NP_004642 (OMIM: 300050) ubiquitin carboxyl-termin ( 963) 239 45.9 0.001
XP_016861124 (OMIM: 614471) PREDICTED: ubiquitin c ( 871) 233 45.0 0.0017
XP_005264888 (OMIM: 614471) PREDICTED: ubiquitin c (1268) 233 45.1 0.0023
XP_016861123 (OMIM: 614471) PREDICTED: ubiquitin c (1270) 233 45.1 0.0023
XP_016861122 (OMIM: 614471) PREDICTED: ubiquitin c (1281) 233 45.1 0.0024
XP_016861120 (OMIM: 614471) PREDICTED: ubiquitin c (1283) 233 45.1 0.0024
XP_016861121 (OMIM: 614471) PREDICTED: ubiquitin c (1283) 233 45.1 0.0024
XP_016861119 (OMIM: 614471) PREDICTED: ubiquitin c (1285) 233 45.1 0.0024
XP_016861118 (OMIM: 614471) PREDICTED: ubiquitin c (1303) 233 45.1 0.0024
XP_016861117 (OMIM: 614471) PREDICTED: ubiquitin c (1305) 233 45.1 0.0024
XP_016861116 (OMIM: 614471) PREDICTED: ubiquitin c (1307) 233 45.1 0.0024
NP_006668 (OMIM: 614471) ubiquitin carboxyl-termin (1318) 233 45.1 0.0024
XP_016861115 (OMIM: 614471) PREDICTED: ubiquitin c (1318) 233 45.1 0.0024
XP_016861114 (OMIM: 614471) PREDICTED: ubiquitin c (1320) 233 45.1 0.0024
XP_005264887 (OMIM: 614471) PREDICTED: ubiquitin c (1322) 233 45.1 0.0024
XP_016861113 (OMIM: 614471) PREDICTED: ubiquitin c (1332) 233 45.1 0.0024
XP_006713015 (OMIM: 614471) PREDICTED: ubiquitin c (1367) 233 45.1 0.0025
XP_006713014 (OMIM: 614471) PREDICTED: ubiquitin c (1368) 233 45.1 0.0025
XP_016861112 (OMIM: 614471) PREDICTED: ubiquitin c (1369) 233 45.1 0.0025
XP_006713013 (OMIM: 614471) PREDICTED: ubiquitin c (1369) 233 45.1 0.0025
XP_016861111 (OMIM: 614471) PREDICTED: ubiquitin c (1371) 233 45.1 0.0025
XP_016861110 (OMIM: 614471) PREDICTED: ubiquitin c (1371) 233 45.1 0.0025
NP_001186091 (OMIM: 614471) ubiquitin carboxyl-ter (1372) 233 45.1 0.0025
XP_006713012 (OMIM: 614471) PREDICTED: ubiquitin c (1373) 233 45.1 0.0025
>>NP_005144 (OMIM: 609818) ubiquitin carboxyl-terminal h (798 aa)
initn: 5293 init1: 5293 opt: 5293 Z-score: 3940.4 bits: 740.0 E(85289): 9.6e-213
Smith-Waterman score: 5293; 100.0% identity (100.0% similar) in 798 aa overlap (6-803:1-798)
10 20 30 40 50 60
pF1KSD MKRAAMALHSPQYIFGDFSPDEFNQFFVTPRSSVELPPYSGTVLCGTQAVDKLPDGQEYQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MALHSPQYIFGDFSPDEFNQFFVTPRSSVELPPYSGTVLCGTQAVDKLPDGQEYQ
10 20 30 40 50
70 80 90 100 110 120
pF1KSD RIEFGVDEVIEPSDTLPRTPSYSISSTLNPQAPEFILGCTASKITPDGITKEASYGSIDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RIEFGVDEVIEPSDTLPRTPSYSISSTLNPQAPEFILGCTASKITPDGITKEASYGSIDC
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD QYPGSALALDGSSNVEAEVLENDGVSGGLGQRERKKKKKRPPGYYSYLKDGGDDSISTEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QYPGSALALDGSSNVEAEVLENDGVSGGLGQRERKKKKKRPPGYYSYLKDGGDDSISTEA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD LVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDSPFPGALGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDSPFPGALGSD
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD TRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVANGQILESSGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVANGQILESSGE
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD GTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLFHDSKPSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLFHDSKPSSSS
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD PVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLIHKPVSLQPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLIHKPVSLQPR
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD GLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEFTNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEFTNM
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD PVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEEYLGFILNGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEEYLGFILNGL
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD HEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPRNKTSVTRQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPRNKTSVTRQA
540 550 560 570 580 590
610 620 630 640 650 660
pF1KSD DFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARES
600 610 620 630 640 650
670 680 690 700 710 720
pF1KSD VQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKE
660 670 680 690 700 710
730 740 750 760 770 780
pF1KSD LLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQ
720 730 740 750 760 770
790 800
pF1KSD YQVVKPTAERTAYLLYYRRVDLL
:::::::::::::::::::::::
NP_005 YQVVKPTAERTAYLLYYRRVDLL
780 790
>>NP_001259004 (OMIM: 609818) ubiquitin carboxyl-termina (802 aa)
initn: 5251 init1: 5251 opt: 5253 Z-score: 3910.7 bits: 734.5 E(85289): 4.3e-211
Smith-Waterman score: 5253; 99.5% identity (99.5% similar) in 799 aa overlap (8-803:4-802)
10 20 30 40 50
pF1KSD MKRAAMALHSP---QYIFGDFSPDEFNQFFVTPRSSVELPPYSGTVLCGTQAVDKLPDGQ
: :: ::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPWLPSPGIGQYIFGDFSPDEFNQFFVTPRSSVELPPYSGTVLCGTQAVDKLPDGQ
10 20 30 40 50
60 70 80 90 100 110
pF1KSD EYQRIEFGVDEVIEPSDTLPRTPSYSISSTLNPQAPEFILGCTASKITPDGITKEASYGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EYQRIEFGVDEVIEPSDTLPRTPSYSISSTLNPQAPEFILGCTASKITPDGITKEASYGS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD IDCQYPGSALALDGSSNVEAEVLENDGVSGGLGQRERKKKKKRPPGYYSYLKDGGDDSIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IDCQYPGSALALDGSSNVEAEVLENDGVSGGLGQRERKKKKKRPPGYYSYLKDGGDDSIS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD TEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDSPFPGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDSPFPGAL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD GSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVANGQILES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVANGQILES
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD SGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLFHDSKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLFHDSKPS
300 310 320 330 340 350
360 370 380 390 400 410
pF1KSD SSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLIHKPVSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLIHKPVSL
360 370 380 390 400 410
420 430 440 450 460 470
pF1KSD QPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEF
420 430 440 450 460 470
480 490 500 510 520 530
pF1KSD TNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEEYLGFIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEEYLGFIL
480 490 500 510 520 530
540 550 560 570 580 590
pF1KSD NGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPRNKTSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPRNKTSVT
540 550 560 570 580 590
600 610 620 630 640 650
pF1KSD RQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVA
600 610 620 630 640 650
660 670 680 690 700 710
pF1KSD RESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEI
660 670 680 690 700 710
720 730 740 750 760 770
pF1KSD SKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKV
720 730 740 750 760 770
780 790 800
pF1KSD INQYQVVKPTAERTAYLLYYRRVDLL
::::::::::::::::::::::::::
NP_001 INQYQVVKPTAERTAYLLYYRRVDLL
780 790 800
>>XP_011521742 (OMIM: 609818) PREDICTED: ubiquitin carbo (602 aa)
initn: 3984 init1: 3984 opt: 3984 Z-score: 2970.7 bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)
180 190 200 210 220 230
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
::::::::::::::::::::::::::::::
XP_011 MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
10 20 30
240 250 260 270 280 290
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
40 50 60 70 80 90
300 310 320 330 340 350
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
100 110 120 130 140 150
360 370 380 390 400 410
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
160 170 180 190 200 210
420 430 440 450 460 470
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
220 230 240 250 260 270
480 490 500 510 520 530
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
280 290 300 310 320 330
540 550 560 570 580 590
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
340 350 360 370 380 390
600 610 620 630 640 650
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
400 410 420 430 440 450
660 670 680 690 700 710
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
460 470 480 490 500 510
720 730 740 750 760 770
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
520 530 540 550 560 570
780 790 800
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
::::::::::::::::::::::::::::::::
XP_011 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
580 590 600
>>XP_006721395 (OMIM: 609818) PREDICTED: ubiquitin carbo (602 aa)
initn: 3984 init1: 3984 opt: 3984 Z-score: 2970.7 bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)
180 190 200 210 220 230
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
::::::::::::::::::::::::::::::
XP_006 MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
10 20 30
240 250 260 270 280 290
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
40 50 60 70 80 90
300 310 320 330 340 350
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
100 110 120 130 140 150
360 370 380 390 400 410
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
160 170 180 190 200 210
420 430 440 450 460 470
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
220 230 240 250 260 270
480 490 500 510 520 530
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
280 290 300 310 320 330
540 550 560 570 580 590
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
340 350 360 370 380 390
600 610 620 630 640 650
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
400 410 420 430 440 450
660 670 680 690 700 710
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
460 470 480 490 500 510
720 730 740 750 760 770
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
520 530 540 550 560 570
780 790 800
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
::::::::::::::::::::::::::::::::
XP_006 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
580 590 600
>>XP_016879358 (OMIM: 609818) PREDICTED: ubiquitin carbo (602 aa)
initn: 3984 init1: 3984 opt: 3984 Z-score: 2970.7 bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)
180 190 200 210 220 230
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
::::::::::::::::::::::::::::::
XP_016 MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
10 20 30
240 250 260 270 280 290
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
40 50 60 70 80 90
300 310 320 330 340 350
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
100 110 120 130 140 150
360 370 380 390 400 410
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
160 170 180 190 200 210
420 430 440 450 460 470
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
220 230 240 250 260 270
480 490 500 510 520 530
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
280 290 300 310 320 330
540 550 560 570 580 590
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
340 350 360 370 380 390
600 610 620 630 640 650
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
400 410 420 430 440 450
660 670 680 690 700 710
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
460 470 480 490 500 510
720 730 740 750 760 770
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
520 530 540 550 560 570
780 790 800
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
::::::::::::::::::::::::::::::::
XP_016 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
580 590 600
>>XP_011521743 (OMIM: 609818) PREDICTED: ubiquitin carbo (602 aa)
initn: 3984 init1: 3984 opt: 3984 Z-score: 2970.7 bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)
180 190 200 210 220 230
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
::::::::::::::::::::::::::::::
XP_011 MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
10 20 30
240 250 260 270 280 290
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
40 50 60 70 80 90
300 310 320 330 340 350
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
100 110 120 130 140 150
360 370 380 390 400 410
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
160 170 180 190 200 210
420 430 440 450 460 470
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
220 230 240 250 260 270
480 490 500 510 520 530
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
280 290 300 310 320 330
540 550 560 570 580 590
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
340 350 360 370 380 390
600 610 620 630 640 650
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
400 410 420 430 440 450
660 670 680 690 700 710
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
460 470 480 490 500 510
720 730 740 750 760 770
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
520 530 540 550 560 570
780 790 800
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
::::::::::::::::::::::::::::::::
XP_011 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
580 590 600
>>XP_016879356 (OMIM: 609818) PREDICTED: ubiquitin carbo (602 aa)
initn: 3984 init1: 3984 opt: 3984 Z-score: 2970.7 bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)
180 190 200 210 220 230
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
::::::::::::::::::::::::::::::
XP_016 MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
10 20 30
240 250 260 270 280 290
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
40 50 60 70 80 90
300 310 320 330 340 350
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
100 110 120 130 140 150
360 370 380 390 400 410
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
160 170 180 190 200 210
420 430 440 450 460 470
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
220 230 240 250 260 270
480 490 500 510 520 530
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
280 290 300 310 320 330
540 550 560 570 580 590
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
340 350 360 370 380 390
600 610 620 630 640 650
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
400 410 420 430 440 450
660 670 680 690 700 710
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
460 470 480 490 500 510
720 730 740 750 760 770
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
520 530 540 550 560 570
780 790 800
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
::::::::::::::::::::::::::::::::
XP_016 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
580 590 600
>>XP_016879355 (OMIM: 609818) PREDICTED: ubiquitin carbo (602 aa)
initn: 3984 init1: 3984 opt: 3984 Z-score: 2970.7 bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)
180 190 200 210 220 230
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
::::::::::::::::::::::::::::::
XP_016 MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
10 20 30
240 250 260 270 280 290
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
40 50 60 70 80 90
300 310 320 330 340 350
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
100 110 120 130 140 150
360 370 380 390 400 410
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
160 170 180 190 200 210
420 430 440 450 460 470
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
220 230 240 250 260 270
480 490 500 510 520 530
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
280 290 300 310 320 330
540 550 560 570 580 590
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
340 350 360 370 380 390
600 610 620 630 640 650
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
400 410 420 430 440 450
660 670 680 690 700 710
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
460 470 480 490 500 510
720 730 740 750 760 770
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
520 530 540 550 560 570
780 790 800
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
::::::::::::::::::::::::::::::::
XP_016 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
580 590 600
>>XP_016879354 (OMIM: 609818) PREDICTED: ubiquitin carbo (602 aa)
initn: 3984 init1: 3984 opt: 3984 Z-score: 2970.7 bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)
180 190 200 210 220 230
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
::::::::::::::::::::::::::::::
XP_016 MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
10 20 30
240 250 260 270 280 290
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
40 50 60 70 80 90
300 310 320 330 340 350
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
100 110 120 130 140 150
360 370 380 390 400 410
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
160 170 180 190 200 210
420 430 440 450 460 470
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
220 230 240 250 260 270
480 490 500 510 520 530
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
280 290 300 310 320 330
540 550 560 570 580 590
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
340 350 360 370 380 390
600 610 620 630 640 650
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
400 410 420 430 440 450
660 670 680 690 700 710
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
460 470 480 490 500 510
720 730 740 750 760 770
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
520 530 540 550 560 570
780 790 800
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
::::::::::::::::::::::::::::::::
XP_016 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
580 590 600
>>XP_016879353 (OMIM: 609818) PREDICTED: ubiquitin carbo (602 aa)
initn: 3984 init1: 3984 opt: 3984 Z-score: 2970.7 bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)
180 190 200 210 220 230
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
::::::::::::::::::::::::::::::
XP_016 MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
10 20 30
240 250 260 270 280 290
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
40 50 60 70 80 90
300 310 320 330 340 350
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
100 110 120 130 140 150
360 370 380 390 400 410
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
160 170 180 190 200 210
420 430 440 450 460 470
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
220 230 240 250 260 270
480 490 500 510 520 530
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
280 290 300 310 320 330
540 550 560 570 580 590
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
340 350 360 370 380 390
600 610 620 630 640 650
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
400 410 420 430 440 450
660 670 680 690 700 710
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
460 470 480 490 500 510
720 730 740 750 760 770
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
520 530 540 550 560 570
780 790 800
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
::::::::::::::::::::::::::::::::
XP_016 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
580 590 600
803 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 00:33:04 2016 done: Thu Nov 3 00:33:06 2016
Total Scan time: 10.240 Total Display time: 0.180
Function used was FASTA [36.3.4 Apr, 2011]