Result of FASTA (omim) for
pF1KSDA0142
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0142, 646 aa
1>>>pF1KSDA0142 646 - 646 aa - 646 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.9268+/-0.000521; mu= -4.3587+/- 0.032
mean_var=437.0530+/-93.970, 0's: 0 Z-trim(119.4): 230 B-trim: 1174 in 1/60
Lambda= 0.061349
statistics sampled from 33090 (33358) to 33090 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.718), E-opt: 0.2 (0.391), width: 16
Scan time: 10.980
The best scores are: opt bits E(85289)
NP_003890 (OMIM: 605477) rho guanine nucleotide ex ( 646) 4257 391.8 4.2e-108
NP_001307780 (OMIM: 605477) rho guanine nucleotide ( 646) 4257 391.8 4.2e-108
NP_001106985 (OMIM: 605477) rho guanine nucleotide ( 646) 4257 391.8 4.2e-108
XP_016876314 (OMIM: 605477) PREDICTED: rho guanine ( 646) 4257 391.8 4.2e-108
XP_016876313 (OMIM: 605477) PREDICTED: rho guanine ( 646) 4257 391.8 4.2e-108
NP_001307782 (OMIM: 605477) rho guanine nucleotide ( 721) 4257 391.8 4.5e-108
NP_001307781 (OMIM: 605477) rho guanine nucleotide ( 803) 4257 391.9 4.8e-108
NP_001317526 (OMIM: 605477) rho guanine nucleotide ( 625) 3688 341.4 5.9e-93
NP_001317527 (OMIM: 605477) rho guanine nucleotide ( 625) 3688 341.4 5.9e-93
XP_016876306 (OMIM: 605477) PREDICTED: rho guanine ( 710) 3688 341.4 6.4e-93
NP_001106984 (OMIM: 605477) rho guanine nucleotide ( 753) 3688 341.5 6.7e-93
NP_663788 (OMIM: 605477) rho guanine nucleotide ex ( 782) 3688 341.5 6.8e-93
NP_001106983 (OMIM: 605477) rho guanine nucleotide ( 803) 3688 341.5 7e-93
XP_016876312 (OMIM: 605477) PREDICTED: rho guanine ( 658) 3341 310.7 1.1e-83
XP_016876308 (OMIM: 605477) PREDICTED: rho guanine ( 658) 3341 310.7 1.1e-83
XP_016876307 (OMIM: 605477) PREDICTED: rho guanine ( 658) 3341 310.7 1.1e-83
XP_016876309 (OMIM: 605477) PREDICTED: rho guanine ( 658) 3341 310.7 1.1e-83
XP_016876310 (OMIM: 605477) PREDICTED: rho guanine ( 658) 3341 310.7 1.1e-83
XP_016876311 (OMIM: 605477) PREDICTED: rho guanine ( 658) 3341 310.7 1.1e-83
XP_016876305 (OMIM: 605477) PREDICTED: rho guanine ( 733) 3341 310.8 1.2e-83
XP_016876304 (OMIM: 605477) PREDICTED: rho guanine ( 743) 3341 310.8 1.2e-83
XP_006720019 (OMIM: 605477) PREDICTED: rho guanine ( 815) 3341 310.8 1.2e-83
XP_016876303 (OMIM: 605477) PREDICTED: rho guanine ( 794) 3325 309.4 3.2e-83
NP_001307783 (OMIM: 605477) rho guanine nucleotide ( 547) 3044 284.3 7.7e-76
XP_016876318 (OMIM: 605477) PREDICTED: rho guanine ( 501) 2648 249.2 2.6e-65
XP_016876317 (OMIM: 605477) PREDICTED: rho guanine ( 534) 2301 218.6 4.8e-56
XP_011519435 (OMIM: 605477) PREDICTED: rho guanine ( 504) 2267 215.5 3.7e-55
XP_011529716 (OMIM: 300267,300436) PREDICTED: rho ( 773) 1871 180.7 1.7e-44
NP_001293106 (OMIM: 300267,300436) rho guanine nuc ( 622) 1867 180.2 1.9e-44
XP_011529719 (OMIM: 300267,300436) PREDICTED: rho ( 626) 1865 180.0 2.2e-44
NP_004831 (OMIM: 300267,300436) rho guanine nucleo ( 776) 1867 180.3 2.2e-44
XP_011529715 (OMIM: 300267,300436) PREDICTED: rho ( 780) 1865 180.1 2.5e-44
XP_016885465 (OMIM: 300267,300436) PREDICTED: rho ( 573) 1857 179.3 3.4e-44
XP_005262556 (OMIM: 300267,300436) PREDICTED: rho ( 727) 1857 179.4 4e-44
XP_011529718 (OMIM: 300267,300436) PREDICTED: rho ( 649) 1481 146.1 3.8e-34
XP_011529717 (OMIM: 300267,300436) PREDICTED: rho ( 746) 1481 146.1 4.2e-34
XP_011529714 (OMIM: 300267,300436) PREDICTED: rho ( 803) 1481 146.2 4.4e-34
XP_016885464 (OMIM: 300267,300436) PREDICTED: rho ( 807) 1479 146.0 5e-34
XP_011509578 (OMIM: 605216) PREDICTED: rho guanine ( 483) 379 48.4 7.2e-05
XP_005263746 (OMIM: 605216) PREDICTED: rho guanine ( 483) 379 48.4 7.2e-05
XP_005263745 (OMIM: 605216) PREDICTED: rho guanine ( 483) 379 48.4 7.2e-05
XP_011509579 (OMIM: 605216) PREDICTED: rho guanine ( 483) 379 48.4 7.2e-05
XP_005263744 (OMIM: 605216) PREDICTED: rho guanine ( 567) 379 48.5 8e-05
NP_127462 (OMIM: 605216) rho guanine nucleotide ex ( 670) 379 48.5 9e-05
NP_056135 (OMIM: 605216) rho guanine nucleotide ex ( 690) 379 48.6 9.2e-05
XP_011509576 (OMIM: 605216) PREDICTED: rho guanine (1870) 379 49.0 0.00018
XP_005263738 (OMIM: 605216) PREDICTED: rho guanine (1876) 379 49.0 0.00018
NP_062541 (OMIM: 604464) intersectin-2 isoform 3 [ (1670) 365 47.7 0.00039
NP_006268 (OMIM: 604464) intersectin-2 isoform 1 [ (1697) 365 47.8 0.00039
XP_016883926 (OMIM: 602442) PREDICTED: intersectin (1185) 357 46.9 0.00051
>>NP_003890 (OMIM: 605477) rho guanine nucleotide exchan (646 aa)
initn: 4257 init1: 4257 opt: 4257 Z-score: 2061.9 bits: 391.8 E(85289): 4.2e-108
Smith-Waterman score: 4257; 100.0% identity (100.0% similar) in 646 aa overlap (1-646:1-646)
10 20 30 40 50 60
pF1KSD MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDE
550 560 570 580 590 600
610 620 630 640
pF1KSD VQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
610 620 630 640
>>NP_001307780 (OMIM: 605477) rho guanine nucleotide exc (646 aa)
initn: 4257 init1: 4257 opt: 4257 Z-score: 2061.9 bits: 391.8 E(85289): 4.2e-108
Smith-Waterman score: 4257; 100.0% identity (100.0% similar) in 646 aa overlap (1-646:1-646)
10 20 30 40 50 60
pF1KSD MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDE
550 560 570 580 590 600
610 620 630 640
pF1KSD VQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
610 620 630 640
>>NP_001106985 (OMIM: 605477) rho guanine nucleotide exc (646 aa)
initn: 4257 init1: 4257 opt: 4257 Z-score: 2061.9 bits: 391.8 E(85289): 4.2e-108
Smith-Waterman score: 4257; 100.0% identity (100.0% similar) in 646 aa overlap (1-646:1-646)
10 20 30 40 50 60
pF1KSD MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDE
550 560 570 580 590 600
610 620 630 640
pF1KSD VQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
610 620 630 640
>>XP_016876314 (OMIM: 605477) PREDICTED: rho guanine nuc (646 aa)
initn: 4257 init1: 4257 opt: 4257 Z-score: 2061.9 bits: 391.8 E(85289): 4.2e-108
Smith-Waterman score: 4257; 100.0% identity (100.0% similar) in 646 aa overlap (1-646:1-646)
10 20 30 40 50 60
pF1KSD MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDE
550 560 570 580 590 600
610 620 630 640
pF1KSD VQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
610 620 630 640
>>XP_016876313 (OMIM: 605477) PREDICTED: rho guanine nuc (646 aa)
initn: 4257 init1: 4257 opt: 4257 Z-score: 2061.9 bits: 391.8 E(85289): 4.2e-108
Smith-Waterman score: 4257; 100.0% identity (100.0% similar) in 646 aa overlap (1-646:1-646)
10 20 30 40 50 60
pF1KSD MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDE
550 560 570 580 590 600
610 620 630 640
pF1KSD VQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
610 620 630 640
>>NP_001307782 (OMIM: 605477) rho guanine nucleotide exc (721 aa)
initn: 4257 init1: 4257 opt: 4257 Z-score: 2061.3 bits: 391.8 E(85289): 4.5e-108
Smith-Waterman score: 4257; 100.0% identity (100.0% similar) in 646 aa overlap (1-646:76-721)
10 20 30
pF1KSD MTDNSNNQLVVRAKFNFQQTNEDELSFSKG
::::::::::::::::::::::::::::::
NP_001 HRIKSFDSLGSQSLHTRTSKLFQGQYRSLDMTDNSNNQLVVRAKFNFQQTNEDELSFSKG
50 60 70 80 90 100
40 50 60 70 80 90
pF1KSD DVIHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVSPKSGTLKSPPKGFDTTAIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVIHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVSPKSGTLKSPPKGFDTTAIN
110 120 130 140 150 160
100 110 120 130 140 150
pF1KSD KSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANISYLMGNLEEICSFQQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANISYLMGNLEEICSFQQM
170 180 190 200 210 220
160 170 180 190 200 210
pF1KSD LVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLTYCANHPSAVNVLTEHSEELGEFMET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLTYCANHPSAVNVLTEHSEELGEFMET
230 240 250 260 270 280
220 230 240 250 260 270
pF1KSD KGASSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHTDRQDIQKSMAAFKNLSAQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGASSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHTDRQDIQKSMAAFKNLSAQC
290 300 310 320 330 340
280 290 300 310 320 330
pF1KSD QEVRKRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEVRKRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVL
350 360 370 380 390 400
340 350 360 370 380 390
pF1KSD LMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQE
410 420 430 440 450 460
400 410 420 430 440 450
pF1KSD WVEHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPVTPSSKHADSKPAPLTPAYHTLPHPSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WVEHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPVTPSSKHADSKPAPLTPAYHTLPHPSH
470 480 490 500 510 520
460 470 480 490 500 510
pF1KSD HGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRK
530 540 550 560 570 580
520 530 540 550 560 570
pF1KSD PERKPSDEEFASRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PERKPSDEEFASRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEE
590 600 610 620 630 640
580 590 600 610 620 630
pF1KSD KIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVR
650 660 670 680 690 700
640
pF1KSD KVLKNMNDPAWDETNL
::::::::::::::::
NP_001 KVLKNMNDPAWDETNL
710 720
>>NP_001307781 (OMIM: 605477) rho guanine nucleotide exc (803 aa)
initn: 4257 init1: 4257 opt: 4257 Z-score: 2060.7 bits: 391.9 E(85289): 4.8e-108
Smith-Waterman score: 4257; 100.0% identity (100.0% similar) in 646 aa overlap (1-646:158-803)
10 20 30
pF1KSD MTDNSNNQLVVRAKFNFQQTNEDELSFSKG
::::::::::::::::::::::::::::::
NP_001 HRIKSFDSLGSQSLHTRTSKLFQGQYRSLDMTDNSNNQLVVRAKFNFQQTNEDELSFSKG
130 140 150 160 170 180
40 50 60 70 80 90
pF1KSD DVIHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVSPKSGTLKSPPKGFDTTAIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVIHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVSPKSGTLKSPPKGFDTTAIN
190 200 210 220 230 240
100 110 120 130 140 150
pF1KSD KSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANISYLMGNLEEICSFQQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANISYLMGNLEEICSFQQM
250 260 270 280 290 300
160 170 180 190 200 210
pF1KSD LVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLTYCANHPSAVNVLTEHSEELGEFMET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLTYCANHPSAVNVLTEHSEELGEFMET
310 320 330 340 350 360
220 230 240 250 260 270
pF1KSD KGASSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHTDRQDIQKSMAAFKNLSAQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGASSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHTDRQDIQKSMAAFKNLSAQC
370 380 390 400 410 420
280 290 300 310 320 330
pF1KSD QEVRKRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEVRKRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVL
430 440 450 460 470 480
340 350 360 370 380 390
pF1KSD LMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQE
490 500 510 520 530 540
400 410 420 430 440 450
pF1KSD WVEHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPVTPSSKHADSKPAPLTPAYHTLPHPSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WVEHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPVTPSSKHADSKPAPLTPAYHTLPHPSH
550 560 570 580 590 600
460 470 480 490 500 510
pF1KSD HGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRK
610 620 630 640 650 660
520 530 540 550 560 570
pF1KSD PERKPSDEEFASRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PERKPSDEEFASRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEE
670 680 690 700 710 720
580 590 600 610 620 630
pF1KSD KIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVR
730 740 750 760 770 780
640
pF1KSD KVLKNMNDPAWDETNL
::::::::::::::::
NP_001 KVLKNMNDPAWDETNL
790 800
>>NP_001317526 (OMIM: 605477) rho guanine nucleotide exc (625 aa)
initn: 3730 init1: 3688 opt: 3688 Z-score: 1789.9 bits: 341.4 E(85289): 5.9e-93
Smith-Waterman score: 3688; 99.8% identity (100.0% similar) in 555 aa overlap (1-555:1-555)
10 20 30 40 50 60
pF1KSD MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDE
::::::::::::::.
NP_001 AYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQPSLDSLGRRSSLSRLEPSDLSEDSDYDS
550 560 570 580 590 600
>>NP_001317527 (OMIM: 605477) rho guanine nucleotide exc (625 aa)
initn: 3730 init1: 3688 opt: 3688 Z-score: 1789.9 bits: 341.4 E(85289): 5.9e-93
Smith-Waterman score: 3688; 99.8% identity (100.0% similar) in 555 aa overlap (1-555:1-555)
10 20 30 40 50 60
pF1KSD MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REVKASEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLED
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDE
::::::::::::::.
NP_001 AYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQPSLDSLGRRSSLSRLEPSDLSEDSDYDS
550 560 570 580 590 600
>>XP_016876306 (OMIM: 605477) PREDICTED: rho guanine nuc (710 aa)
initn: 3730 init1: 3688 opt: 3688 Z-score: 1789.2 bits: 341.4 E(85289): 6.4e-93
Smith-Waterman score: 3688; 99.8% identity (100.0% similar) in 555 aa overlap (1-555:86-640)
10 20 30
pF1KSD MTDNSNNQLVVRAKFNFQQTNEDELSFSKG
::::::::::::::::::::::::::::::
XP_016 VYPEPRSESECLSNIREFLRGCGASLRLEDMTDNSNNQLVVRAKFNFQQTNEDELSFSKG
60 70 80 90 100 110
40 50 60 70 80 90
pF1KSD DVIHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVSPKSGTLKSPPKGFDTTAIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVIHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVSPKSGTLKSPPKGFDTTAIN
120 130 140 150 160 170
100 110 120 130 140 150
pF1KSD KSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANISYLMGNLEEICSFQQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANISYLMGNLEEICSFQQM
180 190 200 210 220 230
160 170 180 190 200 210
pF1KSD LVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLTYCANHPSAVNVLTEHSEELGEFMET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLTYCANHPSAVNVLTEHSEELGEFMET
240 250 260 270 280 290
220 230 240 250 260 270
pF1KSD KGASSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHTDRQDIQKSMAAFKNLSAQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGASSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHTDRQDIQKSMAAFKNLSAQC
300 310 320 330 340 350
280 290 300 310 320 330
pF1KSD QEVRKRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEVRKRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVL
360 370 380 390 400 410
340 350 360 370 380 390
pF1KSD LMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQE
420 430 440 450 460 470
400 410 420 430 440 450
pF1KSD WVEHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPVTPSSKHADSKPAPLTPAYHTLPHPSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WVEHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPVTPSSKHADSKPAPLTPAYHTLPHPSH
480 490 500 510 520 530
460 470 480 490 500 510
pF1KSD HGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRK
540 550 560 570 580 590
520 530 540 550 560 570
pF1KSD PERKPSDEEFASRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEE
::::::::::::::::::::::::::::::::::::::::::::.
XP_016 PERKPSDEEFASRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADD
600 610 620 630 640 650
580 590 600 610 620 630
pF1KSD KIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVR
XP_016 DQPSLDSLGRRSSLSRLEPSDLSEDSDYDSIWTAHSYRMGSTSRKSCCSYISHQN
660 670 680 690 700 710
646 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 00:13:43 2016 done: Thu Nov 3 00:13:45 2016
Total Scan time: 10.980 Total Display time: 0.170
Function used was FASTA [36.3.4 Apr, 2011]